RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 COL11A2P13942 1736 aaPredicted RBP17.91■□□□□ 0.46
TUBB3-207ENST00000554927 ABHD8Q96I13 439 aa17.9■□□□□ 0.46
TUBB3-207ENST00000554927 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-207ENST00000554927 HACL1Q9UJ83 578 aa17.9■□□□□ 0.46
TUBB3-207ENST00000554927 ITGBL1O95965 494 aaPredicted RBP17.89■□□□□ 0.45
TUBB3-207ENST00000554927 TEFQ10587 303 aa17.89■□□□□ 0.45
TUBB3-207ENST00000554927 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
TUBB3-207ENST00000554927 CCDC93Q567U6 631 aa17.89■□□□□ 0.45
TUBB3-207ENST00000554927 ZNF496Q96IT1 587 aaPredicted RBP17.89■□□□□ 0.45
TUBB3-207ENST00000554927 HSPA8P11142 646 aaKnown RBP17.88■□□□□ 0.45
TUBB3-207ENST00000554927 EPHX2P34913 555 aa17.88■□□□□ 0.45
TUBB3-207ENST00000554927 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
TUBB3-207ENST00000554927 ZNF277Q9NRM2 450 aaPredicted RBP17.88■□□□□ 0.45
TUBB3-207ENST00000554927 ABT1Q9ULW3 272 aaKnown RBP17.88■□□□□ 0.45
TUBB3-207ENST00000554927 ZNF541Q9H0D2 1346 aa17.88■□□□□ 0.45
TUBB3-207ENST00000554927 MAP2K1Q02750 393 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-207ENST00000554927 HEG1Q9ULI3 1381 aa17.87■□□□□ 0.45
TUBB3-207ENST00000554927 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
TUBB3-207ENST00000554927 SLX4Q8IY92 1834 aa17.86■□□□□ 0.45
TUBB3-207ENST00000554927 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
TUBB3-207ENST00000554927 A1BGP04217 495 aa17.86■□□□□ 0.45
TUBB3-207ENST00000554927 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■■■□ 22.8
TUBB3-207ENST00000554927 MAP1SQ66K74 1059 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-207ENST00000554927 ZNF790Q6PG37 636 aa17.86■□□□□ 0.45
TUBB3-207ENST00000554927 PNMA8AQ86V59 439 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-207ENST00000554927 NBPF5PQ86XG9 351 aaPredicted RBP17.86■□□□□ 0.45
TUBB3-207ENST00000554927 DZIP3Q86Y13 1208 aaKnown RBP17.86■□□□□ 0.45
TUBB3-207ENST00000554927 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
TUBB3-207ENST00000554927 RASSF10A6NK89 507 aa17.85■□□□□ 0.45
TUBB3-207ENST00000554927 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
TUBB3-207ENST00000554927 PAXIP1Q6ZW49 1069 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-207ENST00000554927 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
TUBB3-207ENST00000554927 WDR33Q9C0J8 1336 aaKnown RBP17.85■□□□□ 0.45
TUBB3-207ENST00000554927 SCN4AP35499 1836 aa17.84■□□□□ 0.45
TUBB3-207ENST00000554927 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
TUBB3-207ENST00000554927 CCDC85CA6NKD9 419 aa17.84■□□□□ 0.45
TUBB3-207ENST00000554927 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
TUBB3-207ENST00000554927 NPR1P16066 1061 aa17.84■□□□□ 0.45
TUBB3-207ENST00000554927 C7orf43Q8WVR3 580 aa17.84■□□□□ 0.45
TUBB3-207ENST00000554927 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
TUBB3-207ENST00000554927 GRM1Q13255 1194 aa17.83■□□□□ 0.44
TUBB3-207ENST00000554927 BEGAINQ9BUH8 593 aa17.83■□□□□ 0.44
TUBB3-207ENST00000554927 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
TUBB3-207ENST00000554927 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
TUBB3-207ENST00000554927 VIRMAQ69YN4 1812 aaKnown RBP17.82■□□□□ 0.44
TUBB3-207ENST00000554927 GNAT3A8MTJ3 354 aa17.81■□□□□ 0.44
TUBB3-207ENST00000554927 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-207ENST00000554927 MLLT1Q03111 559 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-207ENST00000554927 IL17REQ8NFR9 667 aa17.81■□□□□ 0.44
TUBB3-207ENST00000554927 ZNF652Q9Y2D9 606 aa17.81■□□□□ 0.44
TUBB3-207ENST00000554927 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
TUBB3-207ENST00000554927 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
TUBB3-207ENST00000554927 SYNE4Q8N205 404 aa17.8■□□□□ 0.44
TUBB3-207ENST00000554927 GAS2L2Q8NHY3 880 aa17.8■□□□□ 0.44
TUBB3-207ENST00000554927 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
TUBB3-207ENST00000554927 GJA3Q9Y6H8 435 aa17.8■□□□□ 0.44
TUBB3-207ENST00000554927 U2SURPO15042 1029 aaKnown RBP17.79■□□□□ 0.44
TUBB3-207ENST00000554927 LMOD1P29536 600 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-207ENST00000554927 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-207ENST00000554927 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
TUBB3-207ENST00000554927 GPC2Q8N158 579 aa17.79■□□□□ 0.44
TUBB3-207ENST00000554927 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
TUBB3-207ENST00000554927 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
TUBB3-207ENST00000554927 BTBD11A6QL63 1104 aa17.78■□□□□ 0.44
TUBB3-207ENST00000554927 FZD9O00144 591 aa17.78■□□□□ 0.44
TUBB3-207ENST00000554927 ECE1P42892 770 aa17.78■□□□□ 0.44
TUBB3-207ENST00000554927 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
TUBB3-207ENST00000554927 CAPNS2Q96L46 248 aa17.78■□□□□ 0.44
TUBB3-207ENST00000554927 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
TUBB3-207ENST00000554927 KCNQ3O43525 872 aa17.77■□□□□ 0.44
TUBB3-207ENST00000554927 GTF2E1P29083 439 aaPredicted RBP17.77■□□□□ 0.44
TUBB3-207ENST00000554927 ALDH1B1P30837 517 aa17.77■□□□□ 0.44
TUBB3-207ENST00000554927 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.44
TUBB3-207ENST00000554927 NIP7Q9Y221 180 aaKnown RBP eCLIP17.77■□□□□ 0.44
TUBB3-207ENST00000554927 USP16Q9Y5T5 823 aa17.77■□□□□ 0.44
TUBB3-207ENST00000554927 CYP4F22Q6NT55 531 aa17.76■□□□□ 0.43
TUBB3-207ENST00000554927 GPR101Q96P66 508 aaPredicted RBP17.76■□□□□ 0.43
TUBB3-207ENST00000554927 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
TUBB3-207ENST00000554927 KLRG2A4D1S0 409 aaPredicted RBP17.75■□□□□ 0.43
TUBB3-207ENST00000554927 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBB3-207ENST00000554927 CC2D1BQ5T0F9 858 aaKnown RBP17.75■□□□□ 0.43
TUBB3-207ENST00000554927 TSKSQ9UJT2 592 aa17.75■□□□□ 0.43
TUBB3-207ENST00000554927 CNGB1Q14028 1251 aaPredicted RBP17.74■□□□□ 0.43
TUBB3-207ENST00000554927 BCORQ6W2J9 1755 aa17.74■□□□□ 0.43
TUBB3-207ENST00000554927 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
TUBB3-207ENST00000554927 PRAMEF22A3QJZ6 481 aa17.73■□□□□ 0.43
TUBB3-207ENST00000554927 PSMD1Q99460 953 aa17.73■□□□□ 0.43
TUBB3-207ENST00000554927 TRAF5O00463 557 aa17.72■□□□□ 0.43
TUBB3-207ENST00000554927 EPS15P42566 896 aa17.72■□□□□ 0.43
TUBB3-207ENST00000554927 LARGE2Q8N3Y3 721 aa17.72■□□□□ 0.43
TUBB3-207ENST00000554927 SNRPA1P09661 255 aaKnown RBP17.71■□□□□ 0.43
TUBB3-207ENST00000554927 RGS19P49795 217 aa17.71■□□□□ 0.43
TUBB3-207ENST00000554927 CEMIPQ8WUJ3 1361 aa17.7■□□□□ 0.42
TUBB3-207ENST00000554927 AOC2O75106 756 aa17.7■□□□□ 0.42
TUBB3-207ENST00000554927 PCDH10Q9P2E7 1040 aa17.7■□□□□ 0.42
TUBB3-207ENST00000554927 CST9Q5W186 159 aa17.69■□□□□ 0.42
TUBB3-207ENST00000554927 CC2D2BQ6DHV5 1058 aa17.69■□□□□ 0.42
TUBB3-207ENST00000554927 USP50Q70EL3 339 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-207ENST00000554927 RPGRQ92834 1020 aaKnown RBP17.69■□□□□ 0.42
TUBB3-207ENST00000554927 TLL2Q9Y6L7 1015 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms