RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
TMEM253-204ENST00000554844 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
TMEM253-204ENST00000554844 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
TMEM253-204ENST00000554844 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
TMEM253-204ENST00000554844 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
TMEM253-204ENST00000554844 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 PRELPP51888 382 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 MASTLQ96GX5 879 aa12.94□□□□□ -0.34
TMEM253-204ENST00000554844 DICER1Q9UPY3 1922 aaKnown RBP12.94□□□□□ -0.34
TMEM253-204ENST00000554844 A1BGP04217 495 aa12.93□□□□□ -0.34
TMEM253-204ENST00000554844 PRPF40BQ6NWY9 871 aaKnown RBP12.93□□□□□ -0.34
TMEM253-204ENST00000554844 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
TMEM253-204ENST00000554844 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
TMEM253-204ENST00000554844 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
TMEM253-204ENST00000554844 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
TMEM253-204ENST00000554844 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
TMEM253-204ENST00000554844 FER1L6Q2WGJ9 1857 aa12.93□□□□□ -0.34
TMEM253-204ENST00000554844 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
TMEM253-204ENST00000554844 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
TMEM253-204ENST00000554844 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
TMEM253-204ENST00000554844 CAMTA2O94983 1202 aa12.91□□□□□ -0.34
TMEM253-204ENST00000554844 SRGNP10124 158 aa12.91□□□□□ -0.34
TMEM253-204ENST00000554844 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
TMEM253-204ENST00000554844 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
TMEM253-204ENST00000554844 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
TMEM253-204ENST00000554844 BCORQ6W2J9 1755 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 POTECB2RU33 542 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
TMEM253-204ENST00000554844 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
TMEM253-204ENST00000554844 NPR1P16066 1061 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
TMEM253-204ENST00000554844 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
TMEM253-204ENST00000554844 ARFGEF2Q9Y6D5 1785 aa12.89□□□□□ -0.35
TMEM253-204ENST00000554844 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
TMEM253-204ENST00000554844 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
TMEM253-204ENST00000554844 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
TMEM253-204ENST00000554844 TPTE2Q6XPS3 522 aa12.89□□□□□ -0.35
TMEM253-204ENST00000554844 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
TMEM253-204ENST00000554844 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
TMEM253-204ENST00000554844 NEFMP07197 916 aa12.88□□□□□ -0.35
TMEM253-204ENST00000554844 EAPPQ56P03 285 aaPredicted RBP12.88□□□□□ -0.35
TMEM253-204ENST00000554844 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMEM253-204ENST00000554844 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
TMEM253-204ENST00000554844 KCNQ3O43525 872 aa12.87□□□□□ -0.35
TMEM253-204ENST00000554844 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
TMEM253-204ENST00000554844 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
TMEM253-204ENST00000554844 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM253-204ENST00000554844 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM253-204ENST00000554844 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
TMEM253-204ENST00000554844 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
TMEM253-204ENST00000554844 SCN4AP35499 1836 aa12.87□□□□□ -0.35
TMEM253-204ENST00000554844 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
TMEM253-204ENST00000554844 FAM177BA6PVY3 158 aa12.86□□□□□ -0.35
TMEM253-204ENST00000554844 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
TMEM253-204ENST00000554844 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
TMEM253-204ENST00000554844 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
TMEM253-204ENST00000554844 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
TMEM253-204ENST00000554844 HACL1Q9UJ83 578 aa12.86□□□□□ -0.35
TMEM253-204ENST00000554844 PCNTO95613 3336 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 RGL2O15211 777 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 POTEIP0CG38 1075 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-204ENST00000554844 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 PHACTR3Q96KR7 559 aa12.85□□□□□ -0.35
TMEM253-204ENST00000554844 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
TMEM253-204ENST00000554844 MCM10Q7L590 875 aa12.84□□□□□ -0.35
TMEM253-204ENST00000554844 NYXQ9GZU5 481 aa12.84□□□□□ -0.35
TMEM253-204ENST00000554844 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
TMEM253-204ENST00000554844 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
TMEM253-204ENST00000554844 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
TMEM253-204ENST00000554844 EPHX2P34913 555 aa12.83□□□□□ -0.36
TMEM253-204ENST00000554844 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
TMEM253-204ENST00000554844 CTCFP49711 727 aaPredicted RBP12.83□□□□□ -0.36
TMEM253-204ENST00000554844 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.36
TMEM253-204ENST00000554844 PASKQ96RG2 1323 aa12.83□□□□□ -0.36
TMEM253-204ENST00000554844 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
TMEM253-204ENST00000554844 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
TMEM253-204ENST00000554844 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
TMEM253-204ENST00000554844 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
TMEM253-204ENST00000554844 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
TMEM253-204ENST00000554844 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
TMEM253-204ENST00000554844 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
TMEM253-204ENST00000554844 PRDM10Q9NQV6 1147 aa12.82□□□□□ -0.36
TMEM253-204ENST00000554844 KLRG2A4D1S0 409 aaPredicted RBP12.81□□□□□ -0.36
TMEM253-204ENST00000554844 FOXN1O15353 648 aa12.81□□□□□ -0.36
TMEM253-204ENST00000554844 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
TMEM253-204ENST00000554844 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
TMEM253-204ENST00000554844 GPC2Q8N158 579 aa12.81□□□□□ -0.36
TMEM253-204ENST00000554844 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
TMEM253-204ENST00000554844 ABT1Q9ULW3 272 aaKnown RBP12.81□□□□□ -0.36
TMEM253-204ENST00000554844 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms