RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
XRCC3-207ENST00000554774 CACNA1SQ13698 1873 aa18.68■□□□□ 0.58
XRCC3-207ENST00000554774 FER1L6Q2WGJ9 1857 aa18.67■□□□□ 0.58
XRCC3-207ENST00000554774 KLRG1Q96E93 195 aa18.67■□□□□ 0.58
XRCC3-207ENST00000554774 CNKSR1Q969H4 720 aa18.66■□□□□ 0.58
XRCC3-207ENST00000554774 DICER1Q9UPY3 1922 aaKnown RBP18.66■□□□□ 0.58
XRCC3-207ENST00000554774 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
XRCC3-207ENST00000554774 HTATSF1O43719 755 aaKnown RBP18.65■□□□□ 0.58
XRCC3-207ENST00000554774 ERFEQ4G0M1 354 aa18.65■□□□□ 0.58
XRCC3-207ENST00000554774 STYK1Q6J9G0 422 aa18.65■□□□□ 0.58
XRCC3-207ENST00000554774 DPY19L2Q6NUT2 758 aa18.65■□□□□ 0.58
XRCC3-207ENST00000554774 NBPF5PQ86XG9 351 aaPredicted RBP18.65■□□□□ 0.58
XRCC3-207ENST00000554774 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
XRCC3-207ENST00000554774 SRGNP10124 158 aa18.64■□□□□ 0.57
XRCC3-207ENST00000554774 PRPF40BQ6NWY9 871 aaKnown RBP18.64■□□□□ 0.57
XRCC3-207ENST00000554774 CLEC4GQ6UXB4 293 aa18.64■□□□□ 0.57
XRCC3-207ENST00000554774 MASTLQ96GX5 879 aa18.64■□□□□ 0.57
XRCC3-207ENST00000554774 TAOK3Q9H2K8 898 aa18.64■□□□□ 0.57
XRCC3-207ENST00000554774 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
XRCC3-207ENST00000554774 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
XRCC3-207ENST00000554774 PCNTO95613 3336 aa18.62■□□□□ 0.57
XRCC3-207ENST00000554774 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
XRCC3-207ENST00000554774 NEFMP07197 916 aa18.62■□□□□ 0.57
XRCC3-207ENST00000554774 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
XRCC3-207ENST00000554774 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
XRCC3-207ENST00000554774 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
XRCC3-207ENST00000554774 LTBP3Q9NS15 1303 aa18.62■□□□□ 0.57
XRCC3-207ENST00000554774 FAM177BA6PVY3 158 aa18.61■□□□□ 0.57
XRCC3-207ENST00000554774 POTECB2RU33 542 aa18.61■□□□□ 0.57
XRCC3-207ENST00000554774 SOGA3Q5TF21 947 aa18.61■□□□□ 0.57
XRCC3-207ENST00000554774 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
XRCC3-207ENST00000554774 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
XRCC3-207ENST00000554774 TPTE2Q6XPS3 522 aa18.6■□□□□ 0.57
XRCC3-207ENST00000554774 JMYQ8N9B5 988 aa18.6■□□□□ 0.57
XRCC3-207ENST00000554774 NPR1P16066 1061 aa18.59■□□□□ 0.57
XRCC3-207ENST00000554774 LAMB4A4D0S4 1761 aa18.59■□□□□ 0.57
XRCC3-207ENST00000554774 HLFQ16534 295 aa18.58■□□□□ 0.56
XRCC3-207ENST00000554774 CCDC93Q567U6 631 aa18.58■□□□□ 0.56
XRCC3-207ENST00000554774 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
XRCC3-207ENST00000554774 RGL2O15211 777 aa18.57■□□□□ 0.56
XRCC3-207ENST00000554774 DDNO94850 711 aaPredicted RBP18.57■□□□□ 0.56
XRCC3-207ENST00000554774 GTF2E1P29083 439 aaPredicted RBP18.57■□□□□ 0.56
XRCC3-207ENST00000554774 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
XRCC3-207ENST00000554774 KDM3BQ7LBC6 1761 aa18.56■□□□□ 0.56
XRCC3-207ENST00000554774 KLRG2A4D1S0 409 aaPredicted RBP18.56■□□□□ 0.56
XRCC3-207ENST00000554774 C7orf43Q8WVR3 580 aa18.56■□□□□ 0.56
XRCC3-207ENST00000554774 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
XRCC3-207ENST00000554774 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
XRCC3-207ENST00000554774 OLFM4Q6UX06 510 aa18.54■□□□□ 0.56
XRCC3-207ENST00000554774 PLEKHF1Q96S99 279 aa18.54■□□□□ 0.56
XRCC3-207ENST00000554774 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
XRCC3-207ENST00000554774 RRP7AQ9Y3A4 280 aaKnown RBP18.54■□□□□ 0.56
XRCC3-207ENST00000554774 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
XRCC3-207ENST00000554774 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
XRCC3-207ENST00000554774 FKBP4Q02790 459 aaKnown RBP eCLIP18.53■□□□□ 0.56
XRCC3-207ENST00000554774 ZNF277Q9NRM2 450 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-207ENST00000554774 NUP98P52948 1817 aa18.53■□□□□ 0.56
XRCC3-207ENST00000554774 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
XRCC3-207ENST00000554774 POTEIP0CG38 1075 aa18.52■□□□□ 0.56
XRCC3-207ENST00000554774 POTEJP0CG39 1038 aa18.52■□□□□ 0.56
XRCC3-207ENST00000554774 MYL6BP14649 208 aa18.52■□□□□ 0.56
XRCC3-207ENST00000554774 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.56
XRCC3-207ENST00000554774 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
XRCC3-207ENST00000554774 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
XRCC3-207ENST00000554774 MAP3K15Q6ZN16 1313 aa18.51■□□□□ 0.55
XRCC3-207ENST00000554774 IQCA1LA6NCM1 817 aa18.51■□□□□ 0.55
XRCC3-207ENST00000554774 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
XRCC3-207ENST00000554774 COL13A1Q5TAT6 717 aaPredicted RBP18.51■□□□□ 0.55
XRCC3-207ENST00000554774 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
XRCC3-207ENST00000554774 NUTM1Q86Y26 1132 aa18.51■□□□□ 0.55
XRCC3-207ENST00000554774 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
XRCC3-207ENST00000554774 SCN4AP35499 1836 aa18.5■□□□□ 0.55
XRCC3-207ENST00000554774 ABCC12Q96J65 1359 aa18.5■□□□□ 0.55
XRCC3-207ENST00000554774 GPTP24298 496 aa18.49■□□□□ 0.55
XRCC3-207ENST00000554774 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
XRCC3-207ENST00000554774 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
XRCC3-207ENST00000554774 ZBTB3Q9H5J0 574 aa18.49■□□□□ 0.55
XRCC3-207ENST00000554774 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
XRCC3-207ENST00000554774 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
XRCC3-207ENST00000554774 TAF1DQ9H5J8 278 aaPredicted RBP18.48■□□□□ 0.55
XRCC3-207ENST00000554774 HSPA1AP0DMV8 641 aaKnown RBP18.47■□□□□ 0.55
XRCC3-207ENST00000554774 HSPA1BP0DMV9 641 aaKnown RBP18.47■□□□□ 0.55
XRCC3-207ENST00000554774 CRY2Q49AN0 593 aa18.47■□□□□ 0.55
XRCC3-207ENST00000554774 LDHDQ86WU2 507 aa18.47■□□□□ 0.55
XRCC3-207ENST00000554774 RPGRQ92834 1020 aaKnown RBP18.47■□□□□ 0.55
XRCC3-207ENST00000554774 CREBZFQ9NS37 354 aa18.47■□□□□ 0.55
XRCC3-207ENST00000554774 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
XRCC3-207ENST00000554774 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
XRCC3-207ENST00000554774 EAPPQ56P03 285 aaPredicted RBP18.46■□□□□ 0.55
XRCC3-207ENST00000554774 MKRN1Q9UHC7 482 aaKnown RBP18.46■□□□□ 0.55
XRCC3-207ENST00000554774 SUSD4Q5VX71 490 aa18.45■□□□□ 0.54
XRCC3-207ENST00000554774 HACL1Q9UJ83 578 aa18.45■□□□□ 0.54
XRCC3-207ENST00000554774 CLEC11AQ9Y240 323 aa18.45■□□□□ 0.54
XRCC3-207ENST00000554774 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
XRCC3-207ENST00000554774 FZD9O00144 591 aa18.44■□□□□ 0.54
XRCC3-207ENST00000554774 EIF2S2P20042 333 aaKnown RBP18.44■□□□□ 0.54
XRCC3-207ENST00000554774 RIPK4P57078 832 aa18.44■□□□□ 0.54
XRCC3-207ENST00000554774 ZNF34Q8IZ26 560 aa18.44■□□□□ 0.54
XRCC3-207ENST00000554774 JDP2Q8WYK2 163 aa18.44■□□□□ 0.54
XRCC3-207ENST00000554774 PSMD1Q99460 953 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms