RNA–Protein interactions for RNA: ENST00000554744.1

SEL1L-203, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-203ENST00000554744 ERVV-2B6SEH9 535 aa8.58□□□□□ -1.04
SEL1L-203ENST00000554744 APAF1O14727 1248 aa8.58□□□□□ -1.04
SEL1L-203ENST00000554744 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
SEL1L-203ENST00000554744 CALD1Q05682 793 aaKnown RBP8.58□□□□□ -1.04
SEL1L-203ENST00000554744 KRT27Q7Z3Y8 459 aa8.58□□□□□ -1.04
SEL1L-203ENST00000554744 MARCH10Q8NA82 808 aaPredicted RBP8.58□□□□□ -1.04
SEL1L-203ENST00000554744 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
SEL1L-203ENST00000554744 KDM6AO15550 1401 aaPredicted RBP8.57□□□□□ -1.04
SEL1L-203ENST00000554744 RIPK4P57078 832 aa8.57□□□□□ -1.04
SEL1L-203ENST00000554744 FAM196AQ6ZSG2 479 aa8.57□□□□□ -1.04
SEL1L-203ENST00000554744 CCDC146Q8IYE0 955 aa8.57□□□□□ -1.04
SEL1L-203ENST00000554744 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
SEL1L-203ENST00000554744 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
SEL1L-203ENST00000554744 BABAM1Q9NWV8 329 aa8.57□□□□□ -1.04
SEL1L-203ENST00000554744 IL16Q14005 1332 aa8.56□□□□□ -1.04
SEL1L-203ENST00000554744 ZNF521Q96K83 1311 aa8.56□□□□□ -1.04
SEL1L-203ENST00000554744 RNMTO43148 476 aaKnown RBP8.56□□□□□ -1.04
SEL1L-203ENST00000554744 EVI5O60447 810 aa8.56□□□□□ -1.04
SEL1L-203ENST00000554744 MYT1Q01538 1121 aa8.56□□□□□ -1.04
SEL1L-203ENST00000554744 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
SEL1L-203ENST00000554744 NHSQ6T4R5 1651 aa8.56□□□□□ -1.04
SEL1L-203ENST00000554744 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
SEL1L-203ENST00000554744 TOGARAM1Q9Y4F4 1720 aa8.55□□□□□ -1.04
SEL1L-203ENST00000554744 VIRMAQ69YN4 1812 aaKnown RBP8.55□□□□□ -1.04
SEL1L-203ENST00000554744 SBF2Q86WG5 1849 aa8.55□□□□□ -1.04
SEL1L-203ENST00000554744 WDR63Q8IWG1 891 aa8.55□□□□□ -1.04
SEL1L-203ENST00000554744 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
SEL1L-203ENST00000554744 IL17REQ8NFR9 667 aa8.55□□□□□ -1.04
SEL1L-203ENST00000554744 SLC52A2Q9HAB3 445 aa8.55□□□□□ -1.04
SEL1L-203ENST00000554744 ZBED9Q6R2W3 1325 aa8.54□□□□□ -1.04
SEL1L-203ENST00000554744 DOT1LQ8TEK3 1739 aa8.54□□□□□ -1.04
SEL1L-203ENST00000554744 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
SEL1L-203ENST00000554744 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
SEL1L-203ENST00000554744 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
SEL1L-203ENST00000554744 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 ITGB4P16144 1822 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 HMGB2P26583 209 aaKnown RBP8.53□□□□□ -1.04
SEL1L-203ENST00000554744 TEFQ10587 303 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 KIAA1468Q9P260 1216 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 EP400Q96L91 3159 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 PAPPAQ13219 1627 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
SEL1L-203ENST00000554744 CICQ96RK0 1608 aaPredicted RBP8.52□□□□□ -1.05
SEL1L-203ENST00000554744 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 CABP4P57796 275 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 GNAI1P63096 354 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 TAF7Q15545 349 aaPredicted RBP8.52□□□□□ -1.05
SEL1L-203ENST00000554744 PPP1R15BQ5SWA1 713 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 CFAP44Q96MT7 982 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
SEL1L-203ENST00000554744 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
SEL1L-203ENST00000554744 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
SEL1L-203ENST00000554744 SOS1Q07889 1333 aaPredicted RBP8.52□□□□□ -1.05
SEL1L-203ENST00000554744 KDM3BQ7LBC6 1761 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 UBR2Q8IWV8 1755 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 CHL1O00533 1208 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 COL9A1P20849 921 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
SEL1L-203ENST00000554744 HNRNPUQ00839 825 aaKnown RBP eCLIP8.51□□□□□ -1.05
SEL1L-203ENST00000554744 NEUROD2Q15784 382 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 MCM10Q7L590 875 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 NFATC2IPQ8NCF5 419 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 SMARCC1Q92922 1105 aaPredicted RBP8.51□□□□□ -1.05
SEL1L-203ENST00000554744 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
SEL1L-203ENST00000554744 HEG1Q9ULI3 1381 aa8.5□□□□□ -1.05
SEL1L-203ENST00000554744 BTAF1O14981 1849 aa8.5□□□□□ -1.05
SEL1L-203ENST00000554744 E9PSI1 815 aa8.5□□□□□ -1.05
SEL1L-203ENST00000554744 PIGBQ92521 554 aa8.5□□□□□ -1.05
SEL1L-203ENST00000554744 MYH16Q9H6N6 1097 aa8.5□□□□□ -1.05
SEL1L-203ENST00000554744 TNS1Q9HBL0 1735 aaKnown RBP8.5□□□□□ -1.05
SEL1L-203ENST00000554744 SEPT9Q9UHD8 586 aaPredicted RBP8.5□□□□□ -1.05
SEL1L-203ENST00000554744 KAT6BQ8WYB5 2073 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 PLSCR1O15162 318 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 HOXB7P09629 217 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 DCTN1Q14203 1278 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 ZNF790Q6PG37 636 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 TRMT2AQ8IZ69 625 aaKnown RBP8.49□□□□□ -1.05
SEL1L-203ENST00000554744 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 CHMP4AQ9BY43 222 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 LY75O60449 1722 aa8.49□□□□□ -1.05
SEL1L-203ENST00000554744 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
SEL1L-203ENST00000554744 RGL2O15211 777 aa8.48□□□□□ -1.05
SEL1L-203ENST00000554744 KCNQ2O43526 872 aa8.48□□□□□ -1.05
SEL1L-203ENST00000554744 CT47B1P0C2W7 299 aaPredicted RBP8.48□□□□□ -1.05
SEL1L-203ENST00000554744 SLFN5Q08AF3 891 aa8.48□□□□□ -1.05
SEL1L-203ENST00000554744 TTC5Q8N0Z6 440 aa8.48□□□□□ -1.05
SEL1L-203ENST00000554744 THUMPD2Q9BTF0 503 aaKnown RBP8.48□□□□□ -1.05
SEL1L-203ENST00000554744 PALLDQ8WX93 1383 aa8.48□□□□□ -1.05
SEL1L-203ENST00000554744 TRIM37O94972 964 aa8.47□□□□□ -1.05
SEL1L-203ENST00000554744 MAP3K9P80192 1104 aa8.47□□□□□ -1.05
SEL1L-203ENST00000554744 SLC27A3Q5K4L6 730 aa8.47□□□□□ -1.05
SEL1L-203ENST00000554744 FAM182BQ5T319 152 aa8.47□□□□□ -1.05
SEL1L-203ENST00000554744 PPP1R18Q6NYC8 613 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms