RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 CHPF2Q9P2E5 772 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 SYT1P21579 422 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 NCBP1Q09161 790 aaKnown RBP20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 TAF3Q5VWG9 929 aa20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
PPP4R3A-202ENST00000554390 USP6P35125 1406 aa20.21■□□□□ 0.83
PPP4R3A-202ENST00000554390 TPM3P06753 285 aa20.21■□□□□ 0.83
PPP4R3A-202ENST00000554390 DNM1Q05193 864 aaKnown RBP20.21■□□□□ 0.83
PPP4R3A-202ENST00000554390 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
PPP4R3A-202ENST00000554390 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
PPP4R3A-202ENST00000554390 PI4K2BQ8TCG2 481 aa20.2■□□□□ 0.82
PPP4R3A-202ENST00000554390 TMEM51Q9NW97 253 aa20.2■□□□□ 0.82
PPP4R3A-202ENST00000554390 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
PPP4R3A-202ENST00000554390 HSPA4P34932 840 aa20.2■□□□□ 0.82
PPP4R3A-202ENST00000554390 CAMK4Q16566 473 aa20.19■□□□□ 0.82
PPP4R3A-202ENST00000554390 GOLGA6L6A8MZA4 724 aa20.19■□□□□ 0.82
PPP4R3A-202ENST00000554390 PPFIA3O75145 1194 aa20.19■□□□□ 0.82
PPP4R3A-202ENST00000554390 JAKMIP1Q96N16 626 aaKnown RBP20.18■□□□□ 0.82
PPP4R3A-202ENST00000554390 CTNNA3Q9UI47 895 aa20.18■□□□□ 0.82
PPP4R3A-202ENST00000554390 ZSCAN22P10073 491 aaPredicted RBP20.18■□□□□ 0.82
PPP4R3A-202ENST00000554390 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
PPP4R3A-202ENST00000554390 CCDC9Q9Y3X0 531 aaKnown RBP20.18■□□□□ 0.82
PPP4R3A-202ENST00000554390 SGSM2O43147 1006 aa20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 SMC3Q9UQE7 1217 aa20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 TAF6LQ9Y6J9 622 aa20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 STX6O43752 255 aa20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 PTGS1P23219 599 aa20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 CWF19L2Q2TBE0 894 aaKnown RBP20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 SIL1Q9H173 461 aa20.17■□□□□ 0.82
PPP4R3A-202ENST00000554390 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 LRRC59Q96AG4 307 aaKnown RBP20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 LSG1Q9H089 658 aaKnown RBP20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 NDUFB9Q9Y6M9 179 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 GJB2P29033 226 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 FLT4P35916 1363 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 HOXC9P31274 260 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 STK3Q13188 491 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
PPP4R3A-202ENST00000554390 IGSF1Q8N6C5 1336 aa20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 CHGBP05060 677 aa20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 GABPB1Q06547 395 aaPredicted RBP20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 AIMP1Q12904 312 aaKnown RBP20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 SSH3Q8TE77 659 aa20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 TECPR2O15040 1411 aa20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 ZBTB22O15209 634 aa20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 NAA30Q147X3 362 aaPredicted RBP20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 C16orf45Q96MC5 204 aaPredicted RBP20.15■□□□□ 0.82
PPP4R3A-202ENST00000554390 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.82
PPP4R3A-202ENST00000554390 FAM227BQ96M60 508 aa20.14■□□□□ 0.82
PPP4R3A-202ENST00000554390 CCDC8Q9H0W5 538 aaPredicted RBP20.14■□□□□ 0.82
PPP4R3A-202ENST00000554390 RAD50Q92878 1312 aa20.14■□□□□ 0.81
PPP4R3A-202ENST00000554390 KCNJ4P48050 445 aa20.14■□□□□ 0.81
PPP4R3A-202ENST00000554390 FOSBP53539 338 aa20.14■□□□□ 0.81
PPP4R3A-202ENST00000554390 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
PPP4R3A-202ENST00000554390 EDC3Q96F86 508 aaKnown RBP20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 TNRQ92752 1358 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 F13A1P00488 732 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 SLFN14P0C7P3 912 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 PDE4CQ08493 712 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 SYCP1Q15431 976 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 IL17RAQ96F46 866 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 TMEM2Q9UHN6 1383 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 AGLP35573 1532 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 TTC14Q96N46 770 aa20.13■□□□□ 0.81
PPP4R3A-202ENST00000554390 SMTNL1A8MU46 457 aa20.12■□□□□ 0.81
PPP4R3A-202ENST00000554390 CKAP2LQ8IYA6 745 aa20.12■□□□□ 0.81
PPP4R3A-202ENST00000554390 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
PPP4R3A-202ENST00000554390 LRMPQ12912 555 aa20.12■□□□□ 0.81
PPP4R3A-202ENST00000554390 LIMCH1Q9UPQ0 1083 aa20.12■□□□□ 0.81
PPP4R3A-202ENST00000554390 CCDC192P0DO97 292 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 ST3GAL1Q11201 340 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 CCDC186Q7Z3E2 898 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 CNTROBQ8N137 903 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 SIRT1Q96EB6 747 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 SSH2Q76I76 1423 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 PTPRUQ92729 1446 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 ADAMTS13Q76LX8 1427 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 TLR7Q9NYK1 1049 aaKnown RBP20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 RGPD1P0DJD0 1748 aa20.11■□□□□ 0.81
PPP4R3A-202ENST00000554390 TNNT1P13805 278 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 ME3Q16798 604 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 NBPF6Q5VWK0 638 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 NBPF4Q96M43 638 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 DIP2BQ9P265 1576 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 DNAAF4Q8WXU2 420 aa20.1■□□□□ 0.81
PPP4R3A-202ENST00000554390 KIF1BPQ96EK5 621 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms