RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 HSPA8P11142 646 aaKnown RBP10.41□□□□□ -0.74
ABCD4-220ENST00000553998 DEFB115Q30KQ5 88 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
ABCD4-220ENST00000553998 CLEC4GQ6UXB4 293 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 PNMA8AQ86V59 439 aaPredicted RBP10.41□□□□□ -0.74
ABCD4-220ENST00000553998 TTC5Q8N0Z6 440 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 CCDC24Q8N4L8 307 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 CNBD1Q8NA66 436 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 ABHD8Q96I13 439 aa10.41□□□□□ -0.74
ABCD4-220ENST00000553998 FZD9O00144 591 aa10.4□□□□□ -0.74
ABCD4-220ENST00000553998 ST5P78524 1137 aa10.4□□□□□ -0.74
ABCD4-220ENST00000553998 MAP2K1Q02750 393 aaPredicted RBP10.4□□□□□ -0.74
ABCD4-220ENST00000553998 FKBP4Q02790 459 aaKnown RBP eCLIP10.4□□□□□ -0.74
ABCD4-220ENST00000553998 CCDC93Q567U6 631 aa10.4□□□□□ -0.74
ABCD4-220ENST00000553998 IL17REQ8NFR9 667 aa10.4□□□□□ -0.74
ABCD4-220ENST00000553998 HACL1Q9UJ83 578 aa10.4□□□□□ -0.74
ABCD4-220ENST00000553998 KNSTRNQ9Y448 316 aa10.4□□□□□ -0.74
ABCD4-220ENST00000553998 FER1L6Q2WGJ9 1857 aa10.4□□□□□ -0.75
ABCD4-220ENST00000553998 A1BGP04217 495 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 HMOX1P09601 288 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 NPR1P16066 1061 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 EPHX2P34913 555 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 RTKN2Q8IZC4 609 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
ABCD4-220ENST00000553998 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
ABCD4-220ENST00000553998 ZNF541Q9H0D2 1346 aa10.38□□□□□ -0.75
ABCD4-220ENST00000553998 PER1O15534 1290 aaPredicted RBP10.38□□□□□ -0.75
ABCD4-220ENST00000553998 FMNL2Q96PY5 1086 aa10.38□□□□□ -0.75
ABCD4-220ENST00000553998 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
ABCD4-220ENST00000553998 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
ABCD4-220ENST00000553998 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 DIAPH1O60610 1272 aaKnown RBP10.37□□□□□ -0.75
ABCD4-220ENST00000553998 TEFQ10587 303 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
ABCD4-220ENST00000553998 DZIP3Q86Y13 1208 aaKnown RBP10.37□□□□□ -0.75
ABCD4-220ENST00000553998 GPC2Q8N158 579 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 CEMIPQ8WUJ3 1361 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 UBR2Q8IWV8 1755 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 ADAMTSL1Q8N6G6 1762 aa10.37□□□□□ -0.75
ABCD4-220ENST00000553998 SNED1Q8TER0 1413 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 MAP1SQ66K74 1059 aaPredicted RBP10.36□□□□□ -0.75
ABCD4-220ENST00000553998 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
ABCD4-220ENST00000553998 NBPF5PQ86XG9 351 aaPredicted RBP10.36□□□□□ -0.75
ABCD4-220ENST00000553998 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 PSMD1Q99460 953 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 DDX21Q9NR30 783 aaKnown RBP eCLIP10.36□□□□□ -0.75
ABCD4-220ENST00000553998 ZNF277Q9NRM2 450 aaPredicted RBP10.36□□□□□ -0.75
ABCD4-220ENST00000553998 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 NPC1L1Q9UHC9 1359 aa10.36□□□□□ -0.75
ABCD4-220ENST00000553998 COL11A2P13942 1736 aaPredicted RBP10.36□□□□□ -0.75
ABCD4-220ENST00000553998 SCN4AP35499 1836 aa10.35□□□□□ -0.75
ABCD4-220ENST00000553998 IARSP41252 1262 aaKnown RBP10.35□□□□□ -0.75
ABCD4-220ENST00000553998 SYNE4Q8N205 404 aa10.35□□□□□ -0.75
ABCD4-220ENST00000553998 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
ABCD4-220ENST00000553998 SLX4Q8IY92 1834 aa10.35□□□□□ -0.75
ABCD4-220ENST00000553998 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 RNF123Q5XPI4 1314 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 NPHP1O15259 732 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 KCNQ3O43525 872 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 ECE1P42892 770 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 MLLT1Q03111 559 aaPredicted RBP10.34□□□□□ -0.75
ABCD4-220ENST00000553998 CC2D2BQ6DHV5 1058 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 OLFM4Q6UX06 510 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 ZNF652Q9Y2D9 606 aa10.34□□□□□ -0.75
ABCD4-220ENST00000553998 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
ABCD4-220ENST00000553998 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
ABCD4-220ENST00000553998 MAP2K2P36507 400 aa10.33□□□□□ -0.76
ABCD4-220ENST00000553998 DDX10Q13206 875 aaKnown RBP10.33□□□□□ -0.76
ABCD4-220ENST00000553998 CRY2Q49AN0 593 aa10.33□□□□□ -0.76
ABCD4-220ENST00000553998 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
ABCD4-220ENST00000553998 CST9Q5W186 159 aa10.33□□□□□ -0.76
ABCD4-220ENST00000553998 CAPNS2Q96L46 248 aa10.33□□□□□ -0.76
ABCD4-220ENST00000553998 GPR101Q96P66 508 aaPredicted RBP10.33□□□□□ -0.76
ABCD4-220ENST00000553998 SNRPA1P09661 255 aaKnown RBP10.32□□□□□ -0.76
ABCD4-220ENST00000553998 SCNN1DP51172 638 aa10.32□□□□□ -0.76
ABCD4-220ENST00000553998 USP50Q70EL3 339 aaPredicted RBP10.32□□□□□ -0.76
ABCD4-220ENST00000553998 JDP2Q8WYK2 163 aa10.32□□□□□ -0.76
ABCD4-220ENST00000553998 ABT1Q9ULW3 272 aaKnown RBP10.32□□□□□ -0.76
ABCD4-220ENST00000553998 NIP7Q9Y221 180 aaKnown RBP eCLIP10.32□□□□□ -0.76
ABCD4-220ENST00000553998 TLL2Q9Y6L7 1015 aa10.32□□□□□ -0.76
ABCD4-220ENST00000553998 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
ABCD4-220ENST00000553998 NBPF26B4DH59 902 aa10.31□□□□□ -0.76
ABCD4-220ENST00000553998 HOXA10P31260 410 aaPredicted RBP10.31□□□□□ -0.76
ABCD4-220ENST00000553998 EIF6P56537 245 aaKnown RBP10.31□□□□□ -0.76
ABCD4-220ENST00000553998 NBPF10Q6P3W6 841 aaKnown RBP10.31□□□□□ -0.76
ABCD4-220ENST00000553998 NBPF15Q8N660 670 aa10.31□□□□□ -0.76
ABCD4-220ENST00000553998 HHIPL1Q96JK4 782 aa10.31□□□□□ -0.76
ABCD4-220ENST00000553998 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
ABCD4-220ENST00000553998 COL3A1P02461 1466 aaPredicted RBP10.3□□□□□ -0.76
ABCD4-220ENST00000553998 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 CCDC85CA6NKD9 419 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 CA12O43570 354 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 EPS15P42566 896 aa10.3□□□□□ -0.76
ABCD4-220ENST00000553998 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
ABCD4-220ENST00000553998 FMR1Q06787 632 aaKnown RBP eCLIP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms