RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 CWC22Q9HCG8 908 aaKnown RBP12.16□□□□□ -0.46
CFAP54-204ENST00000553778 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
CFAP54-204ENST00000553778 CTIFO43310 598 aaKnown RBP12.15□□□□□ -0.46
CFAP54-204ENST00000553778 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.46
CFAP54-204ENST00000553778 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
CFAP54-204ENST00000553778 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
CFAP54-204ENST00000553778 AKAP4Q5JQC9 854 aa12.15□□□□□ -0.46
CFAP54-204ENST00000553778 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
CFAP54-204ENST00000553778 SYTL4Q96C24 671 aaPredicted RBP12.15□□□□□ -0.46
CFAP54-204ENST00000553778 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.46
CFAP54-204ENST00000553778 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
CFAP54-204ENST00000553778 MBD3O95983 291 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 APBA3O96018 575 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
CFAP54-204ENST00000553778 TEX2Q8IWB9 1127 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 AK9Q5TCS8 1911 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 KCNQ2O43526 872 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
CFAP54-204ENST00000553778 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 ZNF771Q7L3S4 317 aaPredicted RBP12.14□□□□□ -0.47
CFAP54-204ENST00000553778 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 CFAP44Q96MT7 982 aa12.14□□□□□ -0.47
CFAP54-204ENST00000553778 RLBP1P12271 317 aa12.13□□□□□ -0.47
CFAP54-204ENST00000553778 BAG6P46379 1132 aa12.13□□□□□ -0.47
CFAP54-204ENST00000553778 EP400Q96L91 3159 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 MCTP1Q6DN14 999 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 TULP2O00295 520 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
CFAP54-204ENST00000553778 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
CFAP54-204ENST00000553778 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
CFAP54-204ENST00000553778 ERVV-2B6SEH9 535 aa12.11□□□□□ -0.47
CFAP54-204ENST00000553778 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
CFAP54-204ENST00000553778 TIGD1Q96MW7 591 aa12.11□□□□□ -0.47
CFAP54-204ENST00000553778 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
CFAP54-204ENST00000553778 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 RTF1Q92541 710 aaKnown RBP12.1□□□□□ -0.47
CFAP54-204ENST00000553778 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 VGLL3A8MV65 326 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 PLSCR1O15162 318 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 TPM3P06753 285 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 CABP4P57796 275 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 RABEP1Q15276 862 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 DEFB132Q7Z7B7 95 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 GPT2Q8TD30 523 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 CALCOCO1Q9P1Z2 691 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
CFAP54-204ENST00000553778 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
CFAP54-204ENST00000553778 NUCB1Q02818 461 aa12.09□□□□□ -0.47
CFAP54-204ENST00000553778 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
CFAP54-204ENST00000553778 SYAP1Q96A49 352 aaPredicted RBP12.09□□□□□ -0.47
CFAP54-204ENST00000553778 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
CFAP54-204ENST00000553778 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
CFAP54-204ENST00000553778 PHF14O94880 888 aa12.09□□□□□ -0.47
CFAP54-204ENST00000553778 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
CFAP54-204ENST00000553778 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
CFAP54-204ENST00000553778 TSPY26PQ9H489 355 aa12.09□□□□□ -0.47
CFAP54-204ENST00000553778 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
CFAP54-204ENST00000553778 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 HTATSF1O43719 755 aaKnown RBP12.08□□□□□ -0.48
CFAP54-204ENST00000553778 NFE2L2Q16236 605 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 DZIP1LQ8IYY4 767 aaKnown RBP12.08□□□□□ -0.48
CFAP54-204ENST00000553778 NFATC2IPQ8NCF5 419 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 PIGBQ92521 554 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 YY1AP1Q9H869 796 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 TMEM63CQ9P1W3 806 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 SBF2Q86WG5 1849 aa12.08□□□□□ -0.48
CFAP54-204ENST00000553778 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
CFAP54-204ENST00000553778 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.48
CFAP54-204ENST00000553778 KCNJ4P48050 445 aa12.07□□□□□ -0.48
CFAP54-204ENST00000553778 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
CFAP54-204ENST00000553778 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
CFAP54-204ENST00000553778 DDX41Q9UJV9 622 aaKnown RBP12.07□□□□□ -0.48
CFAP54-204ENST00000553778 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
CFAP54-204ENST00000553778 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
CFAP54-204ENST00000553778 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
CFAP54-204ENST00000553778 CTNNA3Q9UI47 895 aa12.07□□□□□ -0.48
CFAP54-204ENST00000553778 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
CFAP54-204ENST00000553778 SYCE3A1L190 88 aa12.06□□□□□ -0.48
CFAP54-204ENST00000553778 TEFQ10587 303 aa12.06□□□□□ -0.48
CFAP54-204ENST00000553778 TERF2Q15554 542 aa12.06□□□□□ -0.48
CFAP54-204ENST00000553778 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
CFAP54-204ENST00000553778 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
CFAP54-204ENST00000553778 SLC52A2Q9HAB3 445 aa12.06□□□□□ -0.48
CFAP54-204ENST00000553778 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
CFAP54-204ENST00000553778 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
CFAP54-204ENST00000553778 TSC1Q92574 1164 aa12.05□□□□□ -0.48
CFAP54-204ENST00000553778 DOT1LQ8TEK3 1739 aa12.05□□□□□ -0.48
CFAP54-204ENST00000553778 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
CFAP54-204ENST00000553778 MCM10Q7L590 875 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms