RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
PSEN1-208ENST00000553719 PTPRCP08575 1304 aa23.06■■□□□ 1.28
PSEN1-208ENST00000553719 COL24A1Q17RW2 1714 aa23.05■■□□□ 1.28
PSEN1-208ENST00000553719 ANKRD36CQ5JPF3 1778 aa23.05■■□□□ 1.28
PSEN1-208ENST00000553719 N4BP2Q86UW6 1770 aaPredicted RBP23.05■■□□□ 1.28
PSEN1-208ENST00000553719 ERVV-1B6SEH8 477 aa23.05■■□□□ 1.28
PSEN1-208ENST00000553719 AIMP1Q12904 312 aaKnown RBP23.05■■□□□ 1.28
PSEN1-208ENST00000553719 PLBD2Q8NHP8 589 aa23.04■■□□□ 1.28
PSEN1-208ENST00000553719 PDGFDQ9GZP0 370 aaPredicted RBP23.04■■□□□ 1.28
PSEN1-208ENST00000553719 SRP68Q9UHB9 627 aaKnown RBP23.04■■□□□ 1.28
PSEN1-208ENST00000553719 NOB1Q9ULX3 412 aaKnown RBP23.04■■□□□ 1.28
PSEN1-208ENST00000553719 RFC4P35249 363 aa23.03■■□□□ 1.28
PSEN1-208ENST00000553719 KSR2Q6VAB6 950 aa23.03■■□□□ 1.28
PSEN1-208ENST00000553719 KIF6Q6ZMV9 814 aa23.03■■□□□ 1.28
PSEN1-208ENST00000553719 ANKRD13DQ6ZTN6 518 aa23.03■■□□□ 1.28
PSEN1-208ENST00000553719 ARHGAP45Q92619 1136 aa23.03■■□□□ 1.28
PSEN1-208ENST00000553719 ATP10DQ9P241 1426 aa23.02■■□□□ 1.28
PSEN1-208ENST00000553719 GYS1P13807 737 aa23.02■■□□□ 1.28
PSEN1-208ENST00000553719 FKBP5Q13451 457 aaPredicted RBP23.02■■□□□ 1.28
PSEN1-208ENST00000553719 R3HDM1Q15032 1099 aaKnown RBP23.02■■□□□ 1.28
PSEN1-208ENST00000553719 HLFQ16534 295 aa23.02■■□□□ 1.28
PSEN1-208ENST00000553719 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
PSEN1-208ENST00000553719 ZBTB3Q9H5J0 574 aa23.02■■□□□ 1.28
PSEN1-208ENST00000553719 PXDNLA1KZ92 1463 aa23.02■■□□□ 1.28
PSEN1-208ENST00000553719 PI4KAP2A4QPH2 592 aa23.01■■□□□ 1.27
PSEN1-208ENST00000553719 DDX58O95786 925 aaKnown RBP23.01■■□□□ 1.27
PSEN1-208ENST00000553719 USPL1Q5W0Q7 1092 aa23.01■■□□□ 1.27
PSEN1-208ENST00000553719 GIGYF2Q6Y7W6 1299 aaKnown RBP23.01■■□□□ 1.27
PSEN1-208ENST00000553719 PI4KAP1Q8N8J0 262 aa23.01■■□□□ 1.27
PSEN1-208ENST00000553719 RNF123Q5XPI4 1314 aa23.01■■□□□ 1.27
PSEN1-208ENST00000553719 CLEC4GQ6UXB4 293 aa23■■□□□ 1.27
PSEN1-208ENST00000553719 ZPR1O75312 459 aa22.99■■□□□ 1.27
PSEN1-208ENST00000553719 TRIM27P14373 513 aa22.99■■□□□ 1.27
PSEN1-208ENST00000553719 MAP3K2Q9Y2U5 619 aa22.99■■□□□ 1.27
PSEN1-208ENST00000553719 ATF7IPQ6VMQ6 1270 aa22.98■■□□□ 1.27
PSEN1-208ENST00000553719 ABCC4O15439 1325 aa22.98■■□□□ 1.27
PSEN1-208ENST00000553719 F6X3S4 739 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 FKBP8Q14318 412 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 ZKSCAN2Q63HK3 967 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 RIC3Q7Z5B4 369 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 SLC16A10Q8TF71 515 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 DNAAF4Q8WXU2 420 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
PSEN1-208ENST00000553719 API5Q9BZZ5 524 aaKnown RBP22.97■■□□□ 1.27
PSEN1-208ENST00000553719 TNNQ9UQP3 1299 aa22.97■■□□□ 1.27
PSEN1-208ENST00000553719 PSDA5PKW4 1024 aaPredicted RBP22.96■■□□□ 1.27
PSEN1-208ENST00000553719 IPO8O15397 1037 aaKnown RBP22.96■■□□□ 1.27
PSEN1-208ENST00000553719 ZNF34Q8IZ26 560 aa22.96■■□□□ 1.27
PSEN1-208ENST00000553719 FRAT1Q92837 279 aaPredicted RBP22.96■■□□□ 1.27
PSEN1-208ENST00000553719 ARXQ96QS3 562 aa22.96■■□□□ 1.27
PSEN1-208ENST00000553719 ZNF652Q9Y2D9 606 aa22.96■■□□□ 1.27
PSEN1-208ENST00000553719 IBTKQ9P2D0 1353 aaPredicted RBP22.96■■□□□ 1.27
PSEN1-208ENST00000553719 TCIRG1Q13488 830 aa22.95■■□□□ 1.26
PSEN1-208ENST00000553719 ISCA1Q9BUE6 129 aa22.95■■□□□ 1.26
PSEN1-208ENST00000553719 NRXN2Q9P2S2 1712 aa22.94■■□□□ 1.26
PSEN1-208ENST00000553719 UBN2Q6ZU65 1347 aa22.94■■□□□ 1.26
PSEN1-208ENST00000553719 RRP1P56182 461 aaKnown RBP22.94■■□□□ 1.26
PSEN1-208ENST00000553719 HSP90AB3PQ58FF7 597 aa22.94■■□□□ 1.26
PSEN1-208ENST00000553719 BEND3Q5T5X7 828 aa22.94■■□□□ 1.26
PSEN1-208ENST00000553719 TBC1D9BQ66K14 1250 aa22.94■■□□□ 1.26
PSEN1-208ENST00000553719 IGKV5-2P06315 115 aa22.93■■□□□ 1.26
PSEN1-208ENST00000553719 TM4SF1P30408 202 aa22.93■■□□□ 1.26
PSEN1-208ENST00000553719 TRIM28Q13263 835 aaKnown RBP22.93■■□□□ 1.26
PSEN1-208ENST00000553719 AFDNP55196 1824 aaKnown RBP22.93■■□□□ 1.26
PSEN1-208ENST00000553719 MSH5O43196 834 aa22.92■■□□□ 1.26
PSEN1-208ENST00000553719 PLIN1O60240 522 aa22.92■■□□□ 1.26
PSEN1-208ENST00000553719 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
PSEN1-208ENST00000553719 NFIXQ14938 502 aa22.92■■□□□ 1.26
PSEN1-208ENST00000553719 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
PSEN1-208ENST00000553719 MYD88Q99836 296 aa22.92■■□□□ 1.26
PSEN1-208ENST00000553719 RLBP1P12271 317 aa22.91■■□□□ 1.26
PSEN1-208ENST00000553719 LINS1Q8NG48 757 aa22.91■■□□□ 1.26
PSEN1-208ENST00000553719 NEURL1BA8MQ27 555 aa22.9■■□□□ 1.26
PSEN1-208ENST00000553719 DDR1Q08345 913 aa22.9■■□□□ 1.26
PSEN1-208ENST00000553719 INTS3Q68E01 1043 aaKnown RBP22.9■■□□□ 1.26
PSEN1-208ENST00000553719 MTFR1LQ9H019 292 aa22.9■■□□□ 1.26
PSEN1-208ENST00000553719 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.26
PSEN1-208ENST00000553719 ATP5J2-PTCD1G3V325 749 aa22.89■■□□□ 1.25
PSEN1-208ENST00000553719 MSL1Q68DK7 614 aa22.89■■□□□ 1.25
PSEN1-208ENST00000553719 NLRP10Q86W26 655 aa22.89■■□□□ 1.25
PSEN1-208ENST00000553719 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.89■■□□□ 1.25
PSEN1-208ENST00000553719 NIP7Q9Y221 180 aaKnown RBP eCLIP22.89■■□□□ 1.25
PSEN1-208ENST00000553719 POLRMTO00411 1230 aaKnown RBP22.88■■□□□ 1.25
PSEN1-208ENST00000553719 GPTP24298 496 aa22.88■■□□□ 1.25
PSEN1-208ENST00000553719 NEXNQ0ZGT2 675 aa22.88■■□□□ 1.25
PSEN1-208ENST00000553719 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
PSEN1-208ENST00000553719 PARP10Q53GL7 1025 aa22.88■■□□□ 1.25
PSEN1-208ENST00000553719 DZIP1LQ8IYY4 767 aaKnown RBP22.88■■□□□ 1.25
PSEN1-208ENST00000553719 CLUAP1Q96AJ1 413 aa22.88■■□□□ 1.25
PSEN1-208ENST00000553719 SGIP1Q9BQI5 828 aa22.88■■□□□ 1.25
PSEN1-208ENST00000553719 ALDH1L1O75891 902 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 ZBTB7AO95365 584 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 CCT4P50991 539 aaKnown RBP22.87■■□□□ 1.25
PSEN1-208ENST00000553719 PDE3AQ14432 1141 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 C20orf194Q5TEA3 1177 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 SLC4A10Q6U841 1118 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 CCDC191Q8NCU4 936 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 SRCIN1Q9C0H9 1055 aa22.87■■□□□ 1.25
PSEN1-208ENST00000553719 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
PSEN1-208ENST00000553719 TMEM57Q8N5G2 664 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms