RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
NPC2-204ENST00000553490 CCDC93Q567U6 631 aa11.53□□□□□ -0.56
NPC2-204ENST00000553490 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
NPC2-204ENST00000553490 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
NPC2-204ENST00000553490 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
NPC2-204ENST00000553490 SRGNP10124 158 aa11.52□□□□□ -0.57
NPC2-204ENST00000553490 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.57
NPC2-204ENST00000553490 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
NPC2-204ENST00000553490 MASTLQ96GX5 879 aa11.52□□□□□ -0.57
NPC2-204ENST00000553490 ABHD8Q96I13 439 aa11.52□□□□□ -0.57
NPC2-204ENST00000553490 ZNF496Q96IT1 587 aaPredicted RBP11.52□□□□□ -0.57
NPC2-204ENST00000553490 SETDB2Q96T68 719 aa11.52□□□□□ -0.57
NPC2-204ENST00000553490 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
NPC2-204ENST00000553490 CAMTA2O94983 1202 aa11.51□□□□□ -0.57
NPC2-204ENST00000553490 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
NPC2-204ENST00000553490 IL6STP40189 918 aaPredicted RBP11.51□□□□□ -0.57
NPC2-204ENST00000553490 HACL1Q9UJ83 578 aa11.51□□□□□ -0.57
NPC2-204ENST00000553490 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
NPC2-204ENST00000553490 KNSTRNQ9Y448 316 aa11.51□□□□□ -0.57
NPC2-204ENST00000553490 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
NPC2-204ENST00000553490 EPHX2P34913 555 aa11.5□□□□□ -0.57
NPC2-204ENST00000553490 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
NPC2-204ENST00000553490 TEFQ10587 303 aa11.5□□□□□ -0.57
NPC2-204ENST00000553490 ZNF790Q6PG37 636 aa11.5□□□□□ -0.57
NPC2-204ENST00000553490 TEX13AQ9BXU3 409 aaPredicted RBP11.5□□□□□ -0.57
NPC2-204ENST00000553490 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
NPC2-204ENST00000553490 CLSPNQ9HAW4 1339 aa11.5□□□□□ -0.57
NPC2-204ENST00000553490 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
NPC2-204ENST00000553490 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPC2-204ENST00000553490 MAP2K1Q02750 393 aaPredicted RBP11.49□□□□□ -0.57
NPC2-204ENST00000553490 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
NPC2-204ENST00000553490 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
NPC2-204ENST00000553490 ABT1Q9ULW3 272 aaKnown RBP11.49□□□□□ -0.57
NPC2-204ENST00000553490 NPR1P16066 1061 aa11.48□□□□□ -0.57
NPC2-204ENST00000553490 DEFB115Q30KQ5 88 aa11.48□□□□□ -0.57
NPC2-204ENST00000553490 PNMA8AQ86V59 439 aaPredicted RBP11.48□□□□□ -0.57
NPC2-204ENST00000553490 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
NPC2-204ENST00000553490 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
NPC2-204ENST00000553490 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
NPC2-204ENST00000553490 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
NPC2-204ENST00000553490 WDR33Q9C0J8 1336 aaKnown RBP11.48□□□□□ -0.57
NPC2-204ENST00000553490 COL3A1P02461 1466 aaPredicted RBP11.48□□□□□ -0.57
NPC2-204ENST00000553490 LTBP1Q14766 1721 aa11.47□□□□□ -0.57
NPC2-204ENST00000553490 DIAPH1O60610 1272 aaKnown RBP11.47□□□□□ -0.57
NPC2-204ENST00000553490 A1BGP04217 495 aa11.47□□□□□ -0.57
NPC2-204ENST00000553490 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
NPC2-204ENST00000553490 OLFM4Q6UX06 510 aa11.47□□□□□ -0.57
NPC2-204ENST00000553490 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
NPC2-204ENST00000553490 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
NPC2-204ENST00000553490 IARSP41252 1262 aaKnown RBP11.46□□□□□ -0.57
NPC2-204ENST00000553490 GAS2L2Q8NHY3 880 aa11.46□□□□□ -0.57
NPC2-204ENST00000553490 ZNF652Q9Y2D9 606 aa11.46□□□□□ -0.57
NPC2-204ENST00000553490 SNED1Q8TER0 1413 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 CCDC85CA6NKD9 419 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 GNAT3A8MTJ3 354 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 PIP4K2AP48426 406 aaPredicted RBP11.45□□□□□ -0.58
NPC2-204ENST00000553490 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
NPC2-204ENST00000553490 GRM1Q13255 1194 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 RTKN2Q8IZC4 609 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 GPC2Q8N158 579 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 IL17REQ8NFR9 667 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
NPC2-204ENST00000553490 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
NPC2-204ENST00000553490 COL4A5P29400 1685 aa11.45□□□□□ -0.58
NPC2-204ENST00000553490 TRPM7Q96QT4 1865 aa11.44□□□□□ -0.58
NPC2-204ENST00000553490 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
NPC2-204ENST00000553490 FZD9O00144 591 aa11.44□□□□□ -0.58
NPC2-204ENST00000553490 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
NPC2-204ENST00000553490 CAPNS2Q96L46 248 aa11.44□□□□□ -0.58
NPC2-204ENST00000553490 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
NPC2-204ENST00000553490 KLRG2A4D1S0 409 aaPredicted RBP11.43□□□□□ -0.58
NPC2-204ENST00000553490 U2SURPO15042 1029 aaKnown RBP11.43□□□□□ -0.58
NPC2-204ENST00000553490 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
NPC2-204ENST00000553490 ECE1P42892 770 aa11.43□□□□□ -0.58
NPC2-204ENST00000553490 SYNE4Q8N205 404 aa11.43□□□□□ -0.58
NPC2-204ENST00000553490 JDP2Q8WYK2 163 aa11.43□□□□□ -0.58
NPC2-204ENST00000553490 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
NPC2-204ENST00000553490 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
NPC2-204ENST00000553490 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 FAM177BA6PVY3 158 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 BTBD11A6QL63 1104 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 KCNQ3O43525 872 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 EIF6P56537 245 aaKnown RBP11.42□□□□□ -0.58
NPC2-204ENST00000553490 CYP4F22Q6NT55 531 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 TPTE2Q6XPS3 522 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 PSMD1Q99460 953 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
NPC2-204ENST00000553490 PRAMEF22A3QJZ6 481 aa11.41□□□□□ -0.58
NPC2-204ENST00000553490 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
NPC2-204ENST00000553490 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
NPC2-204ENST00000553490 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
NPC2-204ENST00000553490 GPR101Q96P66 508 aaPredicted RBP11.41□□□□□ -0.58
NPC2-204ENST00000553490 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NPC2-204ENST00000553490 TRAF5O00463 557 aa11.4□□□□□ -0.58
NPC2-204ENST00000553490 RGL2O15211 777 aa11.4□□□□□ -0.58
NPC2-204ENST00000553490 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
NPC2-204ENST00000553490 RGS19P49795 217 aa11.4□□□□□ -0.58
NPC2-204ENST00000553490 SCNN1DP51172 638 aa11.4□□□□□ -0.58
NPC2-204ENST00000553490 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms