RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
IFT43-205ENST00000553438 PER1O15534 1290 aaPredicted RBP13.75□□□□□ -0.21
IFT43-205ENST00000553438 MASTLQ96GX5 879 aa13.75□□□□□ -0.21
IFT43-205ENST00000553438 SLX4Q8IY92 1834 aa13.75□□□□□ -0.21
IFT43-205ENST00000553438 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
IFT43-205ENST00000553438 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
IFT43-205ENST00000553438 DZIP3Q86Y13 1208 aaKnown RBP13.74□□□□□ -0.21
IFT43-205ENST00000553438 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
IFT43-205ENST00000553438 KCNQ3O43525 872 aa13.73□□□□□ -0.21
IFT43-205ENST00000553438 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
IFT43-205ENST00000553438 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
IFT43-205ENST00000553438 CEMIPQ8WUJ3 1361 aa13.72□□□□□ -0.21
IFT43-205ENST00000553438 PASKQ96RG2 1323 aa13.72□□□□□ -0.21
IFT43-205ENST00000553438 BTBD11A6QL63 1104 aa13.72□□□□□ -0.21
IFT43-205ENST00000553438 CCDC93Q567U6 631 aa13.72□□□□□ -0.21
IFT43-205ENST00000553438 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
IFT43-205ENST00000553438 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
IFT43-205ENST00000553438 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
IFT43-205ENST00000553438 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
IFT43-205ENST00000553438 FOXN1O15353 648 aa13.71□□□□□ -0.21
IFT43-205ENST00000553438 PIP4K2AP48426 406 aaPredicted RBP13.71□□□□□ -0.21
IFT43-205ENST00000553438 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
IFT43-205ENST00000553438 CACNA1SQ13698 1873 aa13.71□□□□□ -0.21
IFT43-205ENST00000553438 NPR1P16066 1061 aa13.7□□□□□ -0.22
IFT43-205ENST00000553438 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
IFT43-205ENST00000553438 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
IFT43-205ENST00000553438 PRDM10Q9NQV6 1147 aa13.7□□□□□ -0.22
IFT43-205ENST00000553438 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
IFT43-205ENST00000553438 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
IFT43-205ENST00000553438 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
IFT43-205ENST00000553438 SCN4AP35499 1836 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 ZNF541Q9H0D2 1346 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 VEGFBP49765 207 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
IFT43-205ENST00000553438 EAPPQ56P03 285 aaPredicted RBP13.69□□□□□ -0.22
IFT43-205ENST00000553438 AIDAQ96BJ3 306 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 ZNF277Q9NRM2 450 aaPredicted RBP13.69□□□□□ -0.22
IFT43-205ENST00000553438 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
IFT43-205ENST00000553438 KLRG2A4D1S0 409 aaPredicted RBP13.68□□□□□ -0.22
IFT43-205ENST00000553438 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
IFT43-205ENST00000553438 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
IFT43-205ENST00000553438 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
IFT43-205ENST00000553438 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
IFT43-205ENST00000553438 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
IFT43-205ENST00000553438 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
IFT43-205ENST00000553438 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
IFT43-205ENST00000553438 EPHX2P34913 555 aa13.67□□□□□ -0.22
IFT43-205ENST00000553438 TPTE2Q6XPS3 522 aa13.67□□□□□ -0.22
IFT43-205ENST00000553438 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
IFT43-205ENST00000553438 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
IFT43-205ENST00000553438 FAM177BA6PVY3 158 aa13.66□□□□□ -0.22
IFT43-205ENST00000553438 NBPF26B4DH59 902 aa13.66□□□□□ -0.22
IFT43-205ENST00000553438 RGL2O15211 777 aa13.66□□□□□ -0.22
IFT43-205ENST00000553438 NBPF10Q6P3W6 841 aaKnown RBP13.66□□□□□ -0.22
IFT43-205ENST00000553438 RTKN2Q8IZC4 609 aa13.66□□□□□ -0.22
IFT43-205ENST00000553438 NBPF15Q8N660 670 aa13.66□□□□□ -0.22
IFT43-205ENST00000553438 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
IFT43-205ENST00000553438 IARSP41252 1262 aaKnown RBP13.65□□□□□ -0.22
IFT43-205ENST00000553438 MCM10Q7L590 875 aa13.65□□□□□ -0.22
IFT43-205ENST00000553438 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
IFT43-205ENST00000553438 RTF1Q92541 710 aaKnown RBP13.65□□□□□ -0.22
IFT43-205ENST00000553438 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
IFT43-205ENST00000553438 FZD9O00144 591 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 LBX1P52954 281 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 HLFQ16534 295 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
IFT43-205ENST00000553438 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
IFT43-205ENST00000553438 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
IFT43-205ENST00000553438 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
IFT43-205ENST00000553438 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
IFT43-205ENST00000553438 GPC2Q8N158 579 aa13.63□□□□□ -0.23
IFT43-205ENST00000553438 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
IFT43-205ENST00000553438 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
IFT43-205ENST00000553438 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
IFT43-205ENST00000553438 JDP2Q8WYK2 163 aa13.62□□□□□ -0.23
IFT43-205ENST00000553438 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
IFT43-205ENST00000553438 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
IFT43-205ENST00000553438 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
IFT43-205ENST00000553438 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
IFT43-205ENST00000553438 PSMD1Q99460 953 aa13.61□□□□□ -0.23
IFT43-205ENST00000553438 ABT1Q9ULW3 272 aaKnown RBP13.61□□□□□ -0.23
IFT43-205ENST00000553438 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
IFT43-205ENST00000553438 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
IFT43-205ENST00000553438 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
IFT43-205ENST00000553438 EIF6P56537 245 aaKnown RBP13.6□□□□□ -0.23
IFT43-205ENST00000553438 MAP2K1Q02750 393 aaPredicted RBP13.6□□□□□ -0.23
IFT43-205ENST00000553438 CC2D2BQ6DHV5 1058 aa13.6□□□□□ -0.23
IFT43-205ENST00000553438 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
IFT43-205ENST00000553438 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
IFT43-205ENST00000553438 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
IFT43-205ENST00000553438 LMOD1P29536 600 aaPredicted RBP13.59□□□□□ -0.23
IFT43-205ENST00000553438 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
IFT43-205ENST00000553438 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms