RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 MAP2K2P36507 400 aa16.4■□□□□ 0.22
SNRPF-205ENST00000553192 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
SNRPF-205ENST00000553192 SRGNP10124 158 aa16.39■□□□□ 0.21
SNRPF-205ENST00000553192 SOX10P56693 466 aa16.39■□□□□ 0.21
SNRPF-205ENST00000553192 AMOTQ4VCS5 1084 aa16.39■□□□□ 0.21
SNRPF-205ENST00000553192 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
SNRPF-205ENST00000553192 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
SNRPF-205ENST00000553192 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
SNRPF-205ENST00000553192 CA12O43570 354 aa16.38■□□□□ 0.21
SNRPF-205ENST00000553192 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
SNRPF-205ENST00000553192 ZNF277Q9NRM2 450 aaPredicted RBP16.38■□□□□ 0.21
SNRPF-205ENST00000553192 FZD9O00144 591 aa16.37■□□□□ 0.21
SNRPF-205ENST00000553192 TRAF5O00463 557 aa16.37■□□□□ 0.21
SNRPF-205ENST00000553192 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
SNRPF-205ENST00000553192 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
SNRPF-205ENST00000553192 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
SNRPF-205ENST00000553192 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNRPF-205ENST00000553192 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
SNRPF-205ENST00000553192 CCDC93Q567U6 631 aa16.36■□□□□ 0.21
SNRPF-205ENST00000553192 C1orf141Q5JVX7 400 aa16.36■□□□□ 0.21
SNRPF-205ENST00000553192 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
SNRPF-205ENST00000553192 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
SNRPF-205ENST00000553192 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
SNRPF-205ENST00000553192 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
SNRPF-205ENST00000553192 GPC2Q8N158 579 aa16.34■□□□□ 0.21
SNRPF-205ENST00000553192 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.2
SNRPF-205ENST00000553192 SLC52A2Q9HAB3 445 aa16.33■□□□□ 0.2
SNRPF-205ENST00000553192 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
SNRPF-205ENST00000553192 ZIC5Q96T25 663 aa16.32■□□□□ 0.2
SNRPF-205ENST00000553192 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
SNRPF-205ENST00000553192 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
SNRPF-205ENST00000553192 EPS15P42566 896 aa16.31■□□□□ 0.2
SNRPF-205ENST00000553192 SCNN1DP51172 638 aa16.31■□□□□ 0.2
SNRPF-205ENST00000553192 CIAPIN1Q6FI81 312 aa16.31■□□□□ 0.2
SNRPF-205ENST00000553192 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
SNRPF-205ENST00000553192 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
SNRPF-205ENST00000553192 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
SNRPF-205ENST00000553192 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
SNRPF-205ENST00000553192 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
SNRPF-205ENST00000553192 COL4A5P29400 1685 aa16.3■□□□□ 0.2
SNRPF-205ENST00000553192 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
SNRPF-205ENST00000553192 A0A087WZG4 1122 aa16.29■□□□□ 0.2
SNRPF-205ENST00000553192 HHIPL1Q96JK4 782 aa16.29■□□□□ 0.2
SNRPF-205ENST00000553192 MRC1P22897 1456 aa16.29■□□□□ 0.2
SNRPF-205ENST00000553192 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
SNRPF-205ENST00000553192 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
SNRPF-205ENST00000553192 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
SNRPF-205ENST00000553192 GJA3Q9Y6H8 435 aa16.28■□□□□ 0.2
SNRPF-205ENST00000553192 ST5P78524 1137 aa16.27■□□□□ 0.2
SNRPF-205ENST00000553192 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
SNRPF-205ENST00000553192 SETDB2Q96T68 719 aa16.27■□□□□ 0.2
SNRPF-205ENST00000553192 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
SNRPF-205ENST00000553192 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
SNRPF-205ENST00000553192 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
SNRPF-205ENST00000553192 NPR1P16066 1061 aa16.26■□□□□ 0.19
SNRPF-205ENST00000553192 AKAP4Q5JQC9 854 aa16.26■□□□□ 0.19
SNRPF-205ENST00000553192 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
SNRPF-205ENST00000553192 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
SNRPF-205ENST00000553192 TRPM7Q96QT4 1865 aa16.26■□□□□ 0.19
SNRPF-205ENST00000553192 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
SNRPF-205ENST00000553192 LMOD1P29536 600 aaPredicted RBP16.25■□□□□ 0.19
SNRPF-205ENST00000553192 NPHP1O15259 732 aa16.24■□□□□ 0.19
SNRPF-205ENST00000553192 STARD3NLO95772 234 aa16.23■□□□□ 0.19
SNRPF-205ENST00000553192 EIF6P56537 245 aaKnown RBP16.23■□□□□ 0.19
SNRPF-205ENST00000553192 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
SNRPF-205ENST00000553192 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
SNRPF-205ENST00000553192 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
SNRPF-205ENST00000553192 IL6STP40189 918 aaPredicted RBP16.22■□□□□ 0.19
SNRPF-205ENST00000553192 NOGQ13253 232 aa16.22■□□□□ 0.19
SNRPF-205ENST00000553192 CDCA8Q53HL2 280 aa16.22■□□□□ 0.19
SNRPF-205ENST00000553192 HABP4Q5JVS0 413 aaKnown RBP16.22■□□□□ 0.19
SNRPF-205ENST00000553192 PSMD1Q99460 953 aa16.22■□□□□ 0.19
SNRPF-205ENST00000553192 BCORQ6W2J9 1755 aa16.22■□□□□ 0.19
SNRPF-205ENST00000553192 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.18
SNRPF-205ENST00000553192 GCC1Q96CN9 775 aa16.2■□□□□ 0.18
SNRPF-205ENST00000553192 ZNF496Q96IT1 587 aaPredicted RBP16.2■□□□□ 0.18
SNRPF-205ENST00000553192 PGAP2Q9UHJ9 254 aa16.2■□□□□ 0.18
SNRPF-205ENST00000553192 A1BGP04217 495 aa16.19■□□□□ 0.18
SNRPF-205ENST00000553192 SLC51AQ86UW1 340 aa16.19■□□□□ 0.18
SNRPF-205ENST00000553192 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
SNRPF-205ENST00000553192 SAGE1Q9NXZ1 904 aa16.19■□□□□ 0.18
SNRPF-205ENST00000553192 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
SNRPF-205ENST00000553192 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
SNRPF-205ENST00000553192 IL13P35225 146 aa16.18■□□□□ 0.18
SNRPF-205ENST00000553192 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
SNRPF-205ENST00000553192 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
SNRPF-205ENST00000553192 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
SNRPF-205ENST00000553192 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
SNRPF-205ENST00000553192 CTU1Q7Z7A3 348 aaKnown RBP16.17■□□□□ 0.18
SNRPF-205ENST00000553192 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
SNRPF-205ENST00000553192 RNF186Q9NXI6 227 aa16.17■□□□□ 0.18
SNRPF-205ENST00000553192 HIRAP54198 1017 aaPredicted RBP16.16■□□□□ 0.18
SNRPF-205ENST00000553192 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
SNRPF-205ENST00000553192 TRPA1O75762 1119 aa16.15■□□□□ 0.18
SNRPF-205ENST00000553192 ALDH1B1P30837 517 aa16.15■□□□□ 0.18
SNRPF-205ENST00000553192 HUNKP57058 714 aa16.15■□□□□ 0.18
SNRPF-205ENST00000553192 KIF23Q02241 960 aaPredicted RBP16.15■□□□□ 0.18
SNRPF-205ENST00000553192 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
SNRPF-205ENST00000553192 DLK2Q6UY11 383 aa16.15■□□□□ 0.18
SNRPF-205ENST00000553192 LARGE2Q8N3Y3 721 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms