RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 PAPPAQ13219 1627 aa11.17□□□□□ -0.62
RAB3IP-218ENST00000553099 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
RAB3IP-218ENST00000553099 ITGB4P16144 1822 aa11.17□□□□□ -0.62
RAB3IP-218ENST00000553099 COL22A1Q8NFW1 1626 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 A1BGP04217 495 aa11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 GCKRQ14397 625 aa11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 HSP90AB4PQ58FF6 505 aa11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 HSCBQ8IWL3 235 aa11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 A0A0G2JS52 829 aa11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 SYTL4Q96C24 671 aaPredicted RBP11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 PLCH1Q4KWH8 1693 aa11.16□□□□□ -0.62
RAB3IP-218ENST00000553099 NBPF26B4DH59 902 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 MTX1Q13505 466 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 NBPF14Q5TI25 921 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 NBPF10Q6P3W6 841 aaKnown RBP11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 NBPF15Q8N660 670 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 MAP4K4O95819 1239 aaPredicted RBP11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 UBE3BQ7Z3V4 1068 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 KAZALD1Q96I82 304 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 SIL1Q9H173 461 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
RAB3IP-218ENST00000553099 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 UTYO14607 1347 aa11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 EIF5BO60841 1220 aaKnown RBP11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 PLBD2Q8NHP8 589 aa11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 PIGBQ92521 554 aa11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 ARXQ96QS3 562 aa11.14□□□□□ -0.63
RAB3IP-218ENST00000553099 A0A087WZG4 1122 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 EXOC5O00471 708 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 CLASRPQ8N2M8 674 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 KLHDC4Q8TBB5 520 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 ERBB4Q15303 1308 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 REC8O95072 547 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 UNC5CLQ8IV45 518 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 KIF2CQ99661 725 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 STAP2Q9UGK3 403 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 CCDC9Q9Y3X0 531 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 WNK3Q9BYP7 1800 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 TNS2Q63HR2 1409 aa11.13□□□□□ -0.63
RAB3IP-218ENST00000553099 ERC2O15083 957 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 G3BP1Q13283 466 aaKnown RBP eCLIP11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 NFKBIBQ15653 356 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 USP26Q9BXU7 913 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 TOM1O60784 492 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 DNAJC10Q8IXB1 793 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
RAB3IP-218ENST00000553099 AOX1Q06278 1338 aa11.11□□□□□ -0.63
RAB3IP-218ENST00000553099 AACSQ86V21 672 aa11.11□□□□□ -0.63
RAB3IP-218ENST00000553099 ATG3Q9NT62 314 aa11.11□□□□□ -0.63
RAB3IP-218ENST00000553099 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
RAB3IP-218ENST00000553099 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 ANO2Q9NQ90 1003 aa11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 CHMLP26374 656 aa11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 MYT1Q01538 1121 aa11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 ESYT1Q9BSJ8 1104 aa11.1□□□□□ -0.63
RAB3IP-218ENST00000553099 NRAPQ86VF7 1730 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 FRAT2O75474 233 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 SASH1O94885 1247 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 DDB1Q16531 1140 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 CNTROBQ8N137 903 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 STARD3NLO95772 234 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 SNX21Q969T3 373 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
RAB3IP-218ENST00000553099 BCL9O00512 1426 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 GLRX3O76003 335 aaKnown RBP11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 TEX13AQ9BXU3 409 aaPredicted RBP11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 ECHDC1Q9NTX5 307 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 SPATA31A1Q5TZJ5 1347 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 TTC41PQ6P2S7 1318 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 TJP1Q07157 1748 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 RABEP1Q15276 862 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 LMBR1LQ6UX01 489 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 KIF6Q6ZMV9 814 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
RAB3IP-218ENST00000553099 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-218ENST00000553099 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
RAB3IP-218ENST00000553099 K7ELQ4 463 aaPredicted RBP11.07□□□□□ -0.64
RAB3IP-218ENST00000553099 TLR7Q9NYK1 1049 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-218ENST00000553099 LRP6O75581 1613 aa11.07□□□□□ -0.64
RAB3IP-218ENST00000553099 CASP7P55210 303 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms