RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 GLI3P10071 1580 aa8.9□□□□□ -0.98
BEST3-212ENST00000553096 MMP14P50281 582 aa8.9□□□□□ -0.99
BEST3-212ENST00000553096 FLIIQ13045 1269 aa8.9□□□□□ -0.99
BEST3-212ENST00000553096 C16orf71Q8IYS4 520 aaPredicted RBP8.9□□□□□ -0.99
BEST3-212ENST00000553096 R3HCC1Q9Y3T6 440 aaKnown RBP8.9□□□□□ -0.99
BEST3-212ENST00000553096 SHANK3Q9BYB0 1731 aa8.9□□□□□ -0.99
BEST3-212ENST00000553096 ANKRD24Q8TF21 1146 aa8.89□□□□□ -0.99
BEST3-212ENST00000553096 PRDM16Q9HAZ2 1276 aa8.89□□□□□ -0.99
BEST3-212ENST00000553096 OVOS2A0A0G2JMS6 1433 aa8.89□□□□□ -0.99
BEST3-212ENST00000553096 CLGNO14967 610 aa8.89□□□□□ -0.99
BEST3-212ENST00000553096 PRPF40AO75400 957 aaKnown RBP8.89□□□□□ -0.99
BEST3-212ENST00000553096 PTMAP06454 111 aaKnown RBP8.89□□□□□ -0.99
BEST3-212ENST00000553096 SMARCA5O60264 1052 aaPredicted RBP8.88□□□□□ -0.99
BEST3-212ENST00000553096 PHF14O94880 888 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
BEST3-212ENST00000553096 SLC4A10Q6U841 1118 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 SASS6Q6UVJ0 657 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 PARP4Q9UKK3 1724 aaKnown RBP8.88□□□□□ -0.99
BEST3-212ENST00000553096 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 MEGF6O75095 1541 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 ABCC6O95255 1503 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 UQCRHLA0A096LP55 91 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 ERC2O15083 957 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 UQCRHP07919 91 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 EIF4A1P60842 406 aaKnown RBP8.88□□□□□ -0.99
BEST3-212ENST00000553096 BRINP3Q76B58 766 aa8.88□□□□□ -0.99
BEST3-212ENST00000553096 PHAXQ9H814 394 aaKnown RBP8.88□□□□□ -0.99
BEST3-212ENST00000553096 HMMRO75330 724 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 LMOD2Q6P5Q4 547 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 MPRIPQ6WCQ1 1025 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 ERBB3P21860 1342 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
BEST3-212ENST00000553096 MCCP23508 829 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 CCT4P50991 539 aaKnown RBP8.87□□□□□ -0.99
BEST3-212ENST00000553096 AKAP4Q5JQC9 854 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 ZNF530Q6P9A1 599 aaPredicted RBP8.87□□□□□ -0.99
BEST3-212ENST00000553096 GPT2Q8TD30 523 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 KDM6AO15550 1401 aaPredicted RBP8.87□□□□□ -0.99
BEST3-212ENST00000553096 TNS3Q68CZ2 1445 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 LAMB4A4D0S4 1761 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 SDSP20132 328 aa8.87□□□□□ -0.99
BEST3-212ENST00000553096 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 SOS1Q07889 1333 aaPredicted RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 AFDNP55196 1824 aaKnown RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 RNMTO43148 476 aaKnown RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 FKBP5Q13451 457 aaPredicted RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 INTS4Q96HW7 963 aaKnown RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 STK31Q9BXU1 1019 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 PSEN1P49768 467 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 ZC3H6P61129 1189 aaKnown RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 FAM184AQ8NB25 1140 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 ZNF526Q8TF50 670 aaPredicted RBP8.86□□□□□ -0.99
BEST3-212ENST00000553096 TSPY26PQ9H489 355 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 OSBPL3Q9H4L5 887 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 FAM13BQ9NYF5 915 aa8.86□□□□□ -0.99
BEST3-212ENST00000553096 MRC1P22897 1456 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 PNMA6EA0A0J9YXQ4 647 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 PRAMEF22A3QJZ6 481 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 ANAPC15P60006 121 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 KIAA2012Q0VF49 1180 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 UVSSAQ2YD98 709 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 TMEM63CQ9P1W3 806 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 ADCY9O60503 1353 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 UBR2Q8IWV8 1755 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 SYCE3A1L190 88 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 APBB1O00213 710 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 APPP05067 770 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 OS9Q13438 667 aaPredicted RBP8.85□□□□□ -0.99
BEST3-212ENST00000553096 CERS3Q8IU89 383 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 SMAP1Q8IYB5 467 aaPredicted RBP8.85□□□□□ -0.99
BEST3-212ENST00000553096 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
BEST3-212ENST00000553096 CABLES1Q8TDN4 633 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 ZDHHC9Q9Y397 364 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 ARFGEF2Q9Y6D5 1785 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 PAPPAQ13219 1627 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 SALL3Q9BXA9 1300 aa8.85□□□□□ -0.99
BEST3-212ENST00000553096 EPB41L2O43491 1005 aaKnown RBP8.84□□□□□ -0.99
BEST3-212ENST00000553096 BRD1O95696 1058 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 ANXA1P04083 346 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 CUL4AQ13619 759 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 PKP1Q13835 747 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 PLEKHO1Q53GL0 409 aaPredicted RBP8.84□□□□□ -0.99
BEST3-212ENST00000553096 PSMD1Q99460 953 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 RBM27Q9P2N5 1060 aaKnown RBP8.84□□□□□ -0.99
BEST3-212ENST00000553096 NHSL1Q5SYE7 1610 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 USP44Q9H0E7 712 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 LETM1O95202 739 aaPredicted RBP8.84□□□□□ -0.99
BEST3-212ENST00000553096 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
BEST3-212ENST00000553096 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
BEST3-212ENST00000553096 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
BEST3-212ENST00000553096 GNAI2P04899 355 aa8.83□□□□□ -1
BEST3-212ENST00000553096 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
BEST3-212ENST00000553096 PROSER3Q2NL68 480 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms