RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 MASTLQ96GX5 879 aa15.22■□□□□ 0.03
NEK3-204ENST00000552973 NIP7Q9Y221 180 aaKnown RBP eCLIP15.22■□□□□ 0.03
NEK3-204ENST00000552973 ZNF652Q9Y2D9 606 aa15.22■□□□□ 0.03
NEK3-204ENST00000552973 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.03
NEK3-204ENST00000552973 ZC3H4Q9UPT8 1303 aaKnown RBP15.21■□□□□ 0.03
NEK3-204ENST00000552973 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
NEK3-204ENST00000552973 HLFQ16534 295 aa15.21■□□□□ 0.03
NEK3-204ENST00000552973 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
NEK3-204ENST00000552973 STYK1Q6J9G0 422 aa15.21■□□□□ 0.03
NEK3-204ENST00000552973 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
NEK3-204ENST00000552973 SMC1BQ8NDV3 1235 aa15.21■□□□□ 0.03
NEK3-204ENST00000552973 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
NEK3-204ENST00000552973 DPY19L2Q6NUT2 758 aa15.2■□□□□ 0.02
NEK3-204ENST00000552973 TAOK3Q9H2K8 898 aa15.2■□□□□ 0.02
NEK3-204ENST00000552973 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
NEK3-204ENST00000552973 POTECB2RU33 542 aa15.19■□□□□ 0.02
NEK3-204ENST00000552973 NFE2L2Q16236 605 aa15.19■□□□□ 0.02
NEK3-204ENST00000552973 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
NEK3-204ENST00000552973 PNISRQ8TF01 805 aaKnown RBP15.19■□□□□ 0.02
NEK3-204ENST00000552973 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
NEK3-204ENST00000552973 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
NEK3-204ENST00000552973 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
NEK3-204ENST00000552973 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
NEK3-204ENST00000552973 DDNO94850 711 aaPredicted RBP15.17■□□□□ 0.02
NEK3-204ENST00000552973 MYL6BP14649 208 aa15.17■□□□□ 0.02
NEK3-204ENST00000552973 TTLL7Q6ZT98 887 aa15.17■□□□□ 0.02
NEK3-204ENST00000552973 KLRG1Q96E93 195 aa15.17■□□□□ 0.02
NEK3-204ENST00000552973 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
NEK3-204ENST00000552973 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
NEK3-204ENST00000552973 NPR1P16066 1061 aa15.16■□□□□ 0.02
NEK3-204ENST00000552973 NUTM1Q86Y26 1132 aa15.16■□□□□ 0.02
NEK3-204ENST00000552973 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
NEK3-204ENST00000552973 ANKRD31Q8N7Z5 1873 aa15.16■□□□□ 0.02
NEK3-204ENST00000552973 SBF1O95248 1867 aa15.15■□□□□ 0.02
NEK3-204ENST00000552973 CCDC93Q567U6 631 aa15.15■□□□□ 0.02
NEK3-204ENST00000552973 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
NEK3-204ENST00000552973 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
NEK3-204ENST00000552973 DLEC1Q9Y238 1755 aa15.15■□□□□ 0.02
NEK3-204ENST00000552973 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
NEK3-204ENST00000552973 KLRG2A4D1S0 409 aaPredicted RBP15.14■□□□□ 0.01
NEK3-204ENST00000552973 GPTP24298 496 aa15.14■□□□□ 0.01
NEK3-204ENST00000552973 RIPK4P57078 832 aa15.14■□□□□ 0.01
NEK3-204ENST00000552973 ZBTB3Q9H5J0 574 aa15.14■□□□□ 0.01
NEK3-204ENST00000552973 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
NEK3-204ENST00000552973 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
NEK3-204ENST00000552973 EIF2S2P20042 333 aaKnown RBP15.13■□□□□ 0.01
NEK3-204ENST00000552973 KIF6Q6ZMV9 814 aa15.13■□□□□ 0.01
NEK3-204ENST00000552973 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
NEK3-204ENST00000552973 MAP3K15Q6ZN16 1313 aa15.13■□□□□ 0.01
NEK3-204ENST00000552973 ERVV-1B6SEH8 477 aa15.12■□□□□ 0.01
NEK3-204ENST00000552973 RGL2O15211 777 aa15.12■□□□□ 0.01
NEK3-204ENST00000552973 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
NEK3-204ENST00000552973 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
NEK3-204ENST00000552973 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
NEK3-204ENST00000552973 DDX10Q13206 875 aaKnown RBP15.12■□□□□ 0.01
NEK3-204ENST00000552973 ALDH1B1P30837 517 aa15.11■□□□□ 0.01
NEK3-204ENST00000552973 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
NEK3-204ENST00000552973 JMYQ8N9B5 988 aa15.11■□□□□ 0.01
NEK3-204ENST00000552973 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
NEK3-204ENST00000552973 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
NEK3-204ENST00000552973 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
NEK3-204ENST00000552973 ABCC12Q96J65 1359 aa15.11■□□□□ 0.01
NEK3-204ENST00000552973 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
NEK3-204ENST00000552973 ANXA1P04083 346 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 RALBP1Q15311 655 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 CCDC146Q8IYE0 955 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 RTKN2Q8IZC4 609 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 SYNE4Q8N205 404 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 NECTIN2Q92692 538 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 UBN2Q6ZU65 1347 aa15.1■□□□□ 0.01
NEK3-204ENST00000552973 WDR90Q96KV7 1748 aa15.09■□□□□ 0.01
NEK3-204ENST00000552973 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
NEK3-204ENST00000552973 ZNF541Q9H0D2 1346 aa15.09■□□□□ 0.01
NEK3-204ENST00000552973 TMPOP42166 694 aaKnown RBP15.08■□□□□ 0
NEK3-204ENST00000552973 PROSER3Q2NL68 480 aa15.08■□□□□ 0
NEK3-204ENST00000552973 SLC51AQ86UW1 340 aa15.08■□□□□ 0
NEK3-204ENST00000552973 ZNF34Q8IZ26 560 aa15.08■□□□□ 0
NEK3-204ENST00000552973 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0
NEK3-204ENST00000552973 TIAM2Q8IVF5 1701 aa15.08■□□□□ 0
NEK3-204ENST00000552973 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
NEK3-204ENST00000552973 PDIA6Q15084 440 aa15.07■□□□□ 0
NEK3-204ENST00000552973 CRY2Q49AN0 593 aa15.07■□□□□ 0
NEK3-204ENST00000552973 EAPPQ56P03 285 aaPredicted RBP15.07■□□□□ 0
NEK3-204ENST00000552973 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
NEK3-204ENST00000552973 C3orf67Q6ZVT6 689 aa15.07■□□□□ 0
NEK3-204ENST00000552973 TAF1DQ9H5J8 278 aaPredicted RBP15.07■□□□□ 0
NEK3-204ENST00000552973 IQCA1LA6NCM1 817 aa15.06■□□□□ 0
NEK3-204ENST00000552973 NTSR2O95665 410 aa15.06■□□□□ 0
NEK3-204ENST00000552973 AIMP1Q12904 312 aaKnown RBP15.06■□□□□ 0
NEK3-204ENST00000552973 COL13A1Q5TAT6 717 aaPredicted RBP15.06■□□□□ 0
NEK3-204ENST00000552973 LRP10Q7Z4F1 713 aa15.06■□□□□ 0
NEK3-204ENST00000552973 LAS1LQ9Y4W2 734 aaKnown RBP15.06■□□□□ 0
NEK3-204ENST00000552973 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
NEK3-204ENST00000552973 KRT24Q2M2I5 525 aa15.05■□□□□ -0
NEK3-204ENST00000552973 PPP1R42Q7Z4L9 355 aa15.05■□□□□ -0
NEK3-204ENST00000552973 ZNF428Q96B54 188 aa15.05■□□□□ -0
NEK3-204ENST00000552973 RBM17Q96I25 401 aaKnown RBP15.05■□□□□ -0
NEK3-204ENST00000552973 L3MBTL3Q96JM7 780 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms