RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 PSMA5P28066 241 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 PTH1RQ03431 593 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
PPFIA2-227ENST00000552948 NBPF7P0C2Y1 421 aaPredicted RBP13.71□□□□□ -0.21
PPFIA2-227ENST00000552948 CDC37L1Q7L3B6 337 aa13.71□□□□□ -0.21
PPFIA2-227ENST00000552948 CBX8Q9HC52 389 aa13.71□□□□□ -0.21
PPFIA2-227ENST00000552948 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.21
PPFIA2-227ENST00000552948 NRDCO43847 1150 aa13.71□□□□□ -0.22
PPFIA2-227ENST00000552948 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.22
PPFIA2-227ENST00000552948 SF3A1Q15459 793 aaKnown RBP13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 ME3Q16798 604 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 SCAND2PQ9GZW5 306 aaPredicted RBP13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 ABCC3O15438 1527 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 KIAA0232Q92628 1395 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 AP5Z1O43299 807 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 CEP135Q66GS9 1140 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
PPFIA2-227ENST00000552948 CHD1O14646 1710 aa13.69□□□□□ -0.22
PPFIA2-227ENST00000552948 EYA1Q99502 592 aa13.69□□□□□ -0.22
PPFIA2-227ENST00000552948 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
PPFIA2-227ENST00000552948 STAP2Q9UGK3 403 aa13.69□□□□□ -0.22
PPFIA2-227ENST00000552948 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
PPFIA2-227ENST00000552948 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
PPFIA2-227ENST00000552948 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 LARP1Q6PKG0 1096 aaKnown RBP13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 KINO60870 393 aaKnown RBP13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 DNAAF4Q8WXU2 420 aa13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 SYTL4Q96C24 671 aaPredicted RBP13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
PPFIA2-227ENST00000552948 SMC2O95347 1197 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 RPAP1Q9BWH6 1393 aaPredicted RBP13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 A0A087WWV3 80 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 KIF20AO95235 890 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 SKILP12757 684 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 ME1P48163 572 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 CREB3L3Q68CJ9 461 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
PPFIA2-227ENST00000552948 ERCC4Q92889 916 aaPredicted RBP13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 ZNF75DP51815 510 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 TMEM87AQ8NBN3 555 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 OGFRQ9NZT2 677 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 CD163L1Q9NR16 1453 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 SSH3Q8TE77 659 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 MYO3AQ8NEV4 1616 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 ARHGEF40Q8TER5 1519 aa13.66□□□□□ -0.22
PPFIA2-227ENST00000552948 UHRF1BP1LA0JNW5 1464 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 NR1I2O75469 434 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 FAM177A1Q8N128 213 aaPredicted RBP13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 TTC14Q96N46 770 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 FEZ1Q99689 392 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
PPFIA2-227ENST00000552948 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.23
PPFIA2-227ENST00000552948 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 BRF1Q92994 677 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 GNL2Q13823 731 aaKnown RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 CCAR2Q8N163 923 aaKnown RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 JAK2O60674 1132 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 LEO1Q8WVC0 666 aaPredicted RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 EVI5LQ96CN4 794 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 DEPDC5O75140 1603 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
PPFIA2-227ENST00000552948 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 PTPRMP28827 1452 aa13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
PPFIA2-227ENST00000552948 ZNF215Q9UL58 517 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms