RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 FSTL1Q12841 308 aa11.62□□□□□ -0.55
TMEM116-217ENST00000552801 RTF1Q92541 710 aaKnown RBP11.62□□□□□ -0.55
TMEM116-217ENST00000552801 ZNF622Q969S3 477 aaKnown RBP eCLIP11.62□□□□□ -0.552e-7■□□□□ 10.2
TMEM116-217ENST00000552801 FMNL2Q96PY5 1086 aa11.62□□□□□ -0.55
TMEM116-217ENST00000552801 RRAGCQ9HB90 399 aa11.62□□□□□ -0.55
TMEM116-217ENST00000552801 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
TMEM116-217ENST00000552801 KCPQ6ZWJ8 1503 aa11.61□□□□□ -0.55
TMEM116-217ENST00000552801 TNRC6CQ9HCJ0 1690 aaKnown RBP11.61□□□□□ -0.55
TMEM116-217ENST00000552801 ST5P78524 1137 aa11.61□□□□□ -0.55
TMEM116-217ENST00000552801 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
TMEM116-217ENST00000552801 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
TMEM116-217ENST00000552801 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
TMEM116-217ENST00000552801 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 CLCN6P51797 869 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 RASSF7Q02833 373 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 SMC1BQ8NDV3 1235 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 SBF1O95248 1867 aa11.6□□□□□ -0.55
TMEM116-217ENST00000552801 PER1O15534 1290 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-217ENST00000552801 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-217ENST00000552801 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
TMEM116-217ENST00000552801 ZNF652Q9Y2D9 606 aa11.59□□□□□ -0.55
TMEM116-217ENST00000552801 CARMIL3Q8ND23 1372 aa11.59□□□□□ -0.55
TMEM116-217ENST00000552801 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
TMEM116-217ENST00000552801 WDR90Q96KV7 1748 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 U2AF1L5P0DN76 240 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-217ENST00000552801 VEGFAP15692 232 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-217ENST00000552801 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 IL6STP40189 918 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-217ENST00000552801 U2AF1Q01081 240 aaKnown RBP eCLIP11.58□□□□□ -0.561e-6■■□□□ 12.9
TMEM116-217ENST00000552801 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
TMEM116-217ENST00000552801 EIF5P55010 431 aaKnown RBP11.57□□□□□ -0.56
TMEM116-217ENST00000552801 TBC1D9BQ66K14 1250 aa11.57□□□□□ -0.56
TMEM116-217ENST00000552801 CNKSR1Q969H4 720 aa11.57□□□□□ -0.56
TMEM116-217ENST00000552801 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
TMEM116-217ENST00000552801 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 GABBR2O75899 941 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
TMEM116-217ENST00000552801 IL17REQ8NFR9 667 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 NRXN2Q9P2S2 1712 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 CEP350Q5VT06 3117 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 TIAM2Q8IVF5 1701 aa11.56□□□□□ -0.56
TMEM116-217ENST00000552801 C21orf2O43822 256 aa11.55□□□□□ -0.56
TMEM116-217ENST00000552801 A1BGP04217 495 aa11.55□□□□□ -0.56
TMEM116-217ENST00000552801 GTF2E1P29083 439 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-217ENST00000552801 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-217ENST00000552801 KLRG1Q96E93 195 aa11.55□□□□□ -0.56
TMEM116-217ENST00000552801 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
TMEM116-217ENST00000552801 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
TMEM116-217ENST00000552801 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
TMEM116-217ENST00000552801 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
TMEM116-217ENST00000552801 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
TMEM116-217ENST00000552801 SIPA1L3O60292 1781 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-217ENST00000552801 COL3A1P02461 1466 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-217ENST00000552801 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
TMEM116-217ENST00000552801 PYGBP11216 843 aa11.54□□□□□ -0.56
TMEM116-217ENST00000552801 KIF12Q96FN5 646 aa11.54□□□□□ -0.56
TMEM116-217ENST00000552801 HTRA3P83110 453 aa11.53□□□□□ -0.56
TMEM116-217ENST00000552801 STYK1Q6J9G0 422 aa11.53□□□□□ -0.56
TMEM116-217ENST00000552801 MCM10Q7L590 875 aa11.53□□□□□ -0.56
TMEM116-217ENST00000552801 MASTLQ96GX5 879 aa11.53□□□□□ -0.56
TMEM116-217ENST00000552801 PHACTR3Q96KR7 559 aa11.53□□□□□ -0.56
TMEM116-217ENST00000552801 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
TMEM116-217ENST00000552801 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
TMEM116-217ENST00000552801 CLEC4GQ6UXB4 293 aa11.52□□□□□ -0.57
TMEM116-217ENST00000552801 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
TMEM116-217ENST00000552801 DNAJC5GQ8N7S2 189 aa11.52□□□□□ -0.57
TMEM116-217ENST00000552801 ANKRD31Q8N7Z5 1873 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 CEMIPQ8WUJ3 1361 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 FAM177BA6PVY3 158 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 NFKBIEO00221 500 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 MAP3K13O43283 966 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 KCNQ3O43525 872 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
TMEM116-217ENST00000552801 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 PIP4K2AP48426 406 aaPredicted RBP11.51□□□□□ -0.57
TMEM116-217ENST00000552801 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
TMEM116-217ENST00000552801 PNNQ9H307 717 aaKnown RBP11.51□□□□□ -0.57
TMEM116-217ENST00000552801 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
TMEM116-217ENST00000552801 USP16Q9Y5T5 823 aa11.51□□□□□ -0.57
TMEM116-217ENST00000552801 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
TMEM116-217ENST00000552801 IQCA1LA6NCM1 817 aa11.5□□□□□ -0.57
TMEM116-217ENST00000552801 TAF7Q15545 349 aaPredicted RBP11.5□□□□□ -0.57
TMEM116-217ENST00000552801 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
TMEM116-217ENST00000552801 KIF6Q6ZMV9 814 aa11.5□□□□□ -0.57
TMEM116-217ENST00000552801 PNISRQ8TF01 805 aaKnown RBP11.5□□□□□ -0.57
TMEM116-217ENST00000552801 BCORQ6W2J9 1755 aa11.5□□□□□ -0.57
TMEM116-217ENST00000552801 MAPK8IP3Q9UPT6 1336 aa11.49□□□□□ -0.57
TMEM116-217ENST00000552801 SRGNP10124 158 aa11.49□□□□□ -0.57
TMEM116-217ENST00000552801 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
TMEM116-217ENST00000552801 NPR1P16066 1061 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms