RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
RFX4-210ENST00000552773 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
RFX4-210ENST00000552773 FSD2A1L4K1 749 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 CUL4AQ13619 759 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 RNF20Q5VTR2 975 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 KDM6AO15550 1401 aaPredicted RBP12.58□□□□□ -0.4
RFX4-210ENST00000552773 WDR17Q8IZU2 1322 aa12.58□□□□□ -0.4
RFX4-210ENST00000552773 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
RFX4-210ENST00000552773 BAG4O95429 457 aaKnown RBP12.57□□□□□ -0.4
RFX4-210ENST00000552773 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
RFX4-210ENST00000552773 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.57□□□□□ -0.4
RFX4-210ENST00000552773 NEURL1BA8MQ27 555 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 GCKRQ14397 625 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 ZSCAN31Q96LW9 406 aaPredicted RBP12.57□□□□□ -0.4
RFX4-210ENST00000552773 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
RFX4-210ENST00000552773 TM6SF1Q9BZW5 370 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
RFX4-210ENST00000552773 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 MBD3O95983 291 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
RFX4-210ENST00000552773 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
RFX4-210ENST00000552773 PSMA5P28066 241 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 PDIA6Q15084 440 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 ZCRB1Q8TBF4 217 aaKnown RBP12.56□□□□□ -0.4
RFX4-210ENST00000552773 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 DDX49Q9Y6V7 483 aaKnown RBP12.56□□□□□ -0.4
RFX4-210ENST00000552773 CRYBG1Q9Y4K1 1723 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 MEGF6O75095 1541 aa12.56□□□□□ -0.4
RFX4-210ENST00000552773 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
RFX4-210ENST00000552773 CSPP1Q1MSJ5 1256 aa12.55□□□□□ -0.4
RFX4-210ENST00000552773 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
RFX4-210ENST00000552773 AACSQ86V21 672 aa12.55□□□□□ -0.4
RFX4-210ENST00000552773 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
RFX4-210ENST00000552773 SYAP1Q96A49 352 aaPredicted RBP12.55□□□□□ -0.4
RFX4-210ENST00000552773 COPRSQ9NQ92 184 aa12.55□□□□□ -0.4
RFX4-210ENST00000552773 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
RFX4-210ENST00000552773 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
RFX4-210ENST00000552773 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
RFX4-210ENST00000552773 ANKRD1Q15327 319 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
RFX4-210ENST00000552773 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 ZNF496Q96IT1 587 aaPredicted RBP12.54□□□□□ -0.4
RFX4-210ENST00000552773 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
RFX4-210ENST00000552773 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 LAMB4A4D0S4 1761 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 ANXA1P04083 346 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 SSFA2P28290 1259 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
RFX4-210ENST00000552773 BRINP3Q76B58 766 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 FAM43AQ8N2R8 423 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 MYD88Q99836 296 aa12.54□□□□□ -0.4
RFX4-210ENST00000552773 BICC1Q9H694 974 aaKnown RBP12.54□□□□□ -0.4
RFX4-210ENST00000552773 MYL6BP14649 208 aa12.53□□□□□ -0.4
RFX4-210ENST00000552773 IL2RBP14784 551 aa12.53□□□□□ -0.4
RFX4-210ENST00000552773 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
RFX4-210ENST00000552773 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
RFX4-210ENST00000552773 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
RFX4-210ENST00000552773 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
RFX4-210ENST00000552773 CYP27B1O15528 508 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 PHF14O94880 888 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 KRT32Q14532 448 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 RABL6Q3YEC7 729 aaPredicted RBP12.52□□□□□ -0.4
RFX4-210ENST00000552773 VPS53Q5VIR6 699 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
RFX4-210ENST00000552773 SNRKQ9NRH2 765 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 ATG3Q9NT62 314 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 FBXO3Q9UK99 471 aa12.52□□□□□ -0.4
RFX4-210ENST00000552773 STRCP1A6NGW2 1772 aa12.52□□□□□ -0.41
RFX4-210ENST00000552773 IGKV5-2P06315 115 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 KCNJ4P48050 445 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 EVA1CP58658 441 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 CWC27Q6UX04 472 aaKnown RBP12.51□□□□□ -0.41
RFX4-210ENST00000552773 KCNB2Q92953 911 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 LSG1Q9H089 658 aaKnown RBP12.51□□□□□ -0.41
RFX4-210ENST00000552773 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 UNC5CLQ8IV45 518 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
RFX4-210ENST00000552773 BRD1O95696 1058 aa12.5□□□□□ -0.41
RFX4-210ENST00000552773 ATP5JP18859 108 aa12.5□□□□□ -0.41
RFX4-210ENST00000552773 ZNF445P59923 1031 aa12.5□□□□□ -0.41
RFX4-210ENST00000552773 CHRNA2Q15822 529 aa12.5□□□□□ -0.41
RFX4-210ENST00000552773 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
RFX4-210ENST00000552773 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms