RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
CDK4-213ENST00000552713 TAF1DQ9H5J8 278 aaPredicted RBP11.56□□□□□ -0.56
CDK4-213ENST00000552713 A0A087WZG4 1122 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 CAMTA2O94983 1202 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 STARD3NLO95772 234 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 A1BGP04217 495 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 SRGNP10124 158 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 LBX1P52954 281 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 OLFM4Q6UX06 510 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
CDK4-213ENST00000552713 ZNF541Q9H0D2 1346 aa11.55□□□□□ -0.56
CDK4-213ENST00000552713 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
CDK4-213ENST00000552713 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
CDK4-213ENST00000552713 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CDK4-213ENST00000552713 STYK1Q6J9G0 422 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 IL17REQ8NFR9 667 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 PDZRN3Q9UPQ7 1066 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 TRPM7Q96QT4 1865 aa11.54□□□□□ -0.56
CDK4-213ENST00000552713 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 KCNQ3O43525 872 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 SLC34A2O95436 690 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 POLA2Q14181 598 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
CDK4-213ENST00000552713 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 TTC5Q8N0Z6 440 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 MASTLQ96GX5 879 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
CDK4-213ENST00000552713 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.56
CDK4-213ENST00000552713 IQCA1LA6NCM1 817 aa11.52□□□□□ -0.57
CDK4-213ENST00000552713 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.57
CDK4-213ENST00000552713 IL6STP40189 918 aaPredicted RBP11.52□□□□□ -0.57
CDK4-213ENST00000552713 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDK4-213ENST00000552713 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
CDK4-213ENST00000552713 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
CDK4-213ENST00000552713 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
CDK4-213ENST00000552713 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 COL4A5P29400 1685 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 NUP98P52948 1817 aa11.51□□□□□ -0.57
CDK4-213ENST00000552713 COL3A1P02461 1466 aaPredicted RBP11.51□□□□□ -0.57
CDK4-213ENST00000552713 THSD7BQ9C0I4 1608 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 NPHP1O15259 732 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 DIAPH1O60610 1272 aaKnown RBP11.5□□□□□ -0.57
CDK4-213ENST00000552713 EPHX2P34913 555 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 ST5P78524 1137 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDK4-213ENST00000552713 DZIP3Q86Y13 1208 aaKnown RBP11.5□□□□□ -0.57
CDK4-213ENST00000552713 HACL1Q9UJ83 578 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
CDK4-213ENST00000552713 FKBP4Q02790 459 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDK4-213ENST00000552713 TEFQ10587 303 aa11.49□□□□□ -0.57
CDK4-213ENST00000552713 DEFB115Q30KQ5 88 aa11.49□□□□□ -0.57
CDK4-213ENST00000552713 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
CDK4-213ENST00000552713 SOGA3Q5TF21 947 aa11.49□□□□□ -0.57
CDK4-213ENST00000552713 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
CDK4-213ENST00000552713 TEX13AQ9BXU3 409 aaPredicted RBP11.49□□□□□ -0.57
CDK4-213ENST00000552713 WDR33Q9C0J8 1336 aaKnown RBP11.49□□□□□ -0.57
CDK4-213ENST00000552713 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
CDK4-213ENST00000552713 GNAT3A8MTJ3 354 aa11.48□□□□□ -0.57
CDK4-213ENST00000552713 FZD9O00144 591 aa11.48□□□□□ -0.57
CDK4-213ENST00000552713 SLC51AQ86UW1 340 aa11.48□□□□□ -0.57
CDK4-213ENST00000552713 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
CDK4-213ENST00000552713 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
CDK4-213ENST00000552713 CEMIPQ8WUJ3 1361 aa11.48□□□□□ -0.57
CDK4-213ENST00000552713 SNED1Q8TER0 1413 aa11.48□□□□□ -0.57
CDK4-213ENST00000552713 FAM177BA6PVY3 158 aa11.47□□□□□ -0.57
CDK4-213ENST00000552713 NPR1P16066 1061 aa11.47□□□□□ -0.57
CDK4-213ENST00000552713 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
CDK4-213ENST00000552713 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
CDK4-213ENST00000552713 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
CDK4-213ENST00000552713 IARSP41252 1262 aaKnown RBP11.46□□□□□ -0.57
CDK4-213ENST00000552713 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.57
CDK4-213ENST00000552713 SYNE4Q8N205 404 aa11.46□□□□□ -0.57
CDK4-213ENST00000552713 NBPF15Q8N660 670 aa11.46□□□□□ -0.57
CDK4-213ENST00000552713 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
CDK4-213ENST00000552713 ABT1Q9ULW3 272 aaKnown RBP11.46□□□□□ -0.57
CDK4-213ENST00000552713 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
CDK4-213ENST00000552713 BTBD11A6QL63 1104 aa11.45□□□□□ -0.58
CDK4-213ENST00000552713 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
CDK4-213ENST00000552713 HLFQ16534 295 aa11.45□□□□□ -0.58
CDK4-213ENST00000552713 CLEC4GQ6UXB4 293 aa11.45□□□□□ -0.58
CDK4-213ENST00000552713 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
CDK4-213ENST00000552713 PNMA8AQ86V59 439 aaPredicted RBP11.45□□□□□ -0.58
CDK4-213ENST00000552713 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
CDK4-213ENST00000552713 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDK4-213ENST00000552713 TSKSQ9UJT2 592 aa11.45□□□□□ -0.58
CDK4-213ENST00000552713 NIP7Q9Y221 180 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms