RNA–Protein interactions for RNA: ENST00000552688.5

CS-233, Transcript of citrate synthase, humanhuman

TSL 4

Gene CS, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CS-233ENST00000552688 PRDM10Q9NQV6 1147 aa9.18□□□□□ -0.94
CS-233ENST00000552688 CEMIPQ8WUJ3 1361 aa9.17□□□□□ -0.94
CS-233ENST00000552688 NPC1L1Q9UHC9 1359 aa9.17□□□□□ -0.94
CS-233ENST00000552688 KLRG2A4D1S0 409 aaPredicted RBP9.17□□□□□ -0.94
CS-233ENST00000552688 A1BGP04217 495 aa9.17□□□□□ -0.94
CS-233ENST00000552688 NPR1P16066 1061 aa9.17□□□□□ -0.94
CS-233ENST00000552688 ALDH1B1P30837 517 aa9.17□□□□□ -0.94
CS-233ENST00000552688 CC2D1BQ5T0F9 858 aaKnown RBP9.17□□□□□ -0.94
CS-233ENST00000552688 PNMA8AQ86V59 439 aaPredicted RBP9.17□□□□□ -0.94
CS-233ENST00000552688 RTKN2Q8IZC4 609 aa9.17□□□□□ -0.94
CS-233ENST00000552688 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
CS-233ENST00000552688 C7orf43Q8WVR3 580 aa9.17□□□□□ -0.94
CS-233ENST00000552688 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
CS-233ENST00000552688 TAF1DQ9H5J8 278 aaPredicted RBP9.17□□□□□ -0.94
CS-233ENST00000552688 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
CS-233ENST00000552688 CNTNAP1P78357 1384 aa9.16□□□□□ -0.94
CS-233ENST00000552688 PASKQ96RG2 1323 aa9.16□□□□□ -0.94
CS-233ENST00000552688 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
CS-233ENST00000552688 SNRPA1P09661 255 aaKnown RBP9.16□□□□□ -0.94
CS-233ENST00000552688 CTCFP49711 727 aaPredicted RBP9.16□□□□□ -0.94
CS-233ENST00000552688 FKBP4Q02790 459 aaKnown RBP eCLIP9.16□□□□□ -0.94
CS-233ENST00000552688 HACL1Q9UJ83 578 aa9.16□□□□□ -0.94
CS-233ENST00000552688 AFDNP55196 1824 aaKnown RBP9.16□□□□□ -0.94
CS-233ENST00000552688 DLEC1Q9Y238 1755 aa9.16□□□□□ -0.94
CS-233ENST00000552688 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
CS-233ENST00000552688 POTEIP0CG38 1075 aa9.15□□□□□ -0.94
CS-233ENST00000552688 POTEJP0CG39 1038 aa9.15□□□□□ -0.94
CS-233ENST00000552688 GRIPAP1Q4V328 841 aa9.15□□□□□ -0.94
CS-233ENST00000552688 CC2D2BQ6DHV5 1058 aa9.15□□□□□ -0.94
CS-233ENST00000552688 RTF1Q92541 710 aaKnown RBP9.15□□□□□ -0.94
CS-233ENST00000552688 CFAP53Q96M91 514 aa9.15□□□□□ -0.94
CS-233ENST00000552688 NUDCQ9Y266 331 aa9.15□□□□□ -0.94
CS-233ENST00000552688 USP16Q9Y5T5 823 aa9.15□□□□□ -0.94
CS-233ENST00000552688 FZD9O00144 591 aa9.14□□□□□ -0.95
CS-233ENST00000552688 FOXN1O15353 648 aa9.14□□□□□ -0.95
CS-233ENST00000552688 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
CS-233ENST00000552688 EPHX2P34913 555 aa9.14□□□□□ -0.95
CS-233ENST00000552688 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
CS-233ENST00000552688 JDP2Q8WYK2 163 aa9.14□□□□□ -0.95
CS-233ENST00000552688 NIP7Q9Y221 180 aaKnown RBP eCLIP9.14□□□□□ -0.95
CS-233ENST00000552688 CLEC11AQ9Y240 323 aa9.14□□□□□ -0.95
CS-233ENST00000552688 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
CS-233ENST00000552688 TIAM2Q8IVF5 1701 aa9.14□□□□□ -0.95
CS-233ENST00000552688 RASSF10A6NK89 507 aa9.13□□□□□ -0.95
CS-233ENST00000552688 KCNQ3O43525 872 aa9.13□□□□□ -0.95
CS-233ENST00000552688 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
CS-233ENST00000552688 PRKAR2BP31323 418 aa9.13□□□□□ -0.95
CS-233ENST00000552688 VEGFBP49765 207 aa9.13□□□□□ -0.95
CS-233ENST00000552688 MAP2K1Q02750 393 aaPredicted RBP9.13□□□□□ -0.95
CS-233ENST00000552688 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
CS-233ENST00000552688 GPC2Q8N158 579 aa9.13□□□□□ -0.95
CS-233ENST00000552688 PHACTR3Q96KR7 559 aa9.13□□□□□ -0.95
CS-233ENST00000552688 PSMD1Q99460 953 aa9.13□□□□□ -0.95
CS-233ENST00000552688 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
CS-233ENST00000552688 WBP1LQ9NX94 342 aa9.13□□□□□ -0.95
CS-233ENST00000552688 IARSP41252 1262 aaKnown RBP9.12□□□□□ -0.95
CS-233ENST00000552688 DEFB115Q30KQ5 88 aa9.12□□□□□ -0.95
CS-233ENST00000552688 SYNE4Q8N205 404 aa9.12□□□□□ -0.95
CS-233ENST00000552688 NYXQ9GZU5 481 aa9.12□□□□□ -0.95
CS-233ENST00000552688 ZNF277Q9NRM2 450 aaPredicted RBP9.12□□□□□ -0.95
CS-233ENST00000552688 FER1L6Q2WGJ9 1857 aa9.12□□□□□ -0.95
CS-233ENST00000552688 SCN7AQ01118 1682 aa9.11□□□□□ -0.95
CS-233ENST00000552688 COL3A1P02461 1466 aaPredicted RBP9.11□□□□□ -0.95
CS-233ENST00000552688 ERVV-1B6SEH8 477 aa9.11□□□□□ -0.95
CS-233ENST00000552688 EIF6P56537 245 aaKnown RBP9.11□□□□□ -0.95
CS-233ENST00000552688 TAF7Q15545 349 aaPredicted RBP9.11□□□□□ -0.95
CS-233ENST00000552688 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
CS-233ENST00000552688 ANKRD31Q8N7Z5 1873 aa9.11□□□□□ -0.95
CS-233ENST00000552688 ZNF541Q9H0D2 1346 aa9.1□□□□□ -0.95
CS-233ENST00000552688 PRAMEF22A3QJZ6 481 aa9.1□□□□□ -0.95
CS-233ENST00000552688 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
CS-233ENST00000552688 U2AF1L5P0DN76 240 aaPredicted RBP9.1□□□□□ -0.95
CS-233ENST00000552688 LMOD1P29536 600 aaPredicted RBP9.1□□□□□ -0.95
CS-233ENST00000552688 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
CS-233ENST00000552688 LBX1P52954 281 aa9.1□□□□□ -0.95
CS-233ENST00000552688 U2AF1Q01081 240 aaKnown RBP eCLIP9.1□□□□□ -0.95
CS-233ENST00000552688 DDX10Q13206 875 aaKnown RBP9.1□□□□□ -0.95
CS-233ENST00000552688 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
CS-233ENST00000552688 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
CS-233ENST00000552688 MCM10Q7L590 875 aa9.1□□□□□ -0.95
CS-233ENST00000552688 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
CS-233ENST00000552688 PNISRQ8TF01 805 aaKnown RBP9.1□□□□□ -0.95
CS-233ENST00000552688 SCN4AP35499 1836 aa9.1□□□□□ -0.95
CS-233ENST00000552688 DICER1Q9UPY3 1922 aaKnown RBP9.09□□□□□ -0.95
CS-233ENST00000552688 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
CS-233ENST00000552688 WDR33Q9C0J8 1336 aaKnown RBP9.09□□□□□ -0.95
CS-233ENST00000552688 NEFMP07197 916 aa9.09□□□□□ -0.95
CS-233ENST00000552688 HOXA10P31260 410 aaPredicted RBP9.09□□□□□ -0.95
CS-233ENST00000552688 ECE1P42892 770 aa9.09□□□□□ -0.95
CS-233ENST00000552688 USP50Q70EL3 339 aaPredicted RBP9.09□□□□□ -0.95
CS-233ENST00000552688 RPGRQ92834 1020 aaKnown RBP9.09□□□□□ -0.95
CS-233ENST00000552688 BEGAINQ9BUH8 593 aa9.09□□□□□ -0.95
CS-233ENST00000552688 TMX4Q9H1E5 349 aaPredicted RBP9.09□□□□□ -0.95
CS-233ENST00000552688 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
CS-233ENST00000552688 RTN4Q9NQC3 1192 aaKnown RBP9.09□□□□□ -0.95
CS-233ENST00000552688 DDX21Q9NR30 783 aaKnown RBP eCLIP9.09□□□□□ -0.95
CS-233ENST00000552688 ABT1Q9ULW3 272 aaKnown RBP9.09□□□□□ -0.95
CS-233ENST00000552688 SLX4Q8IY92 1834 aa9.09□□□□□ -0.95
CS-233ENST00000552688 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
CS-233ENST00000552688 FAM177BA6PVY3 158 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms