RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
TUBA1C-209ENST00000552448 CDC45O75419 566 aa13.34□□□□□ -0.27
TUBA1C-209ENST00000552448 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
TUBA1C-209ENST00000552448 UVSSAQ2YD98 709 aa13.34□□□□□ -0.27
TUBA1C-209ENST00000552448 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
TUBA1C-209ENST00000552448 PHF14O94880 888 aa13.33□□□□□ -0.28
TUBA1C-209ENST00000552448 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.28
TUBA1C-209ENST00000552448 USP44Q9H0E7 712 aa13.33□□□□□ -0.28
TUBA1C-209ENST00000552448 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.28
TUBA1C-209ENST00000552448 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 TOM1O60784 492 aa13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 ATP8B2P98198 1209 aa13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 MEGF6O75095 1541 aa13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 APBB1O00213 710 aa13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
TUBA1C-209ENST00000552448 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
TUBA1C-209ENST00000552448 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
TUBA1C-209ENST00000552448 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
TUBA1C-209ENST00000552448 ST18O60284 1047 aa13.3□□□□□ -0.28
TUBA1C-209ENST00000552448 IFNL2Q8IZJ0 200 aa13.3□□□□□ -0.28
TUBA1C-209ENST00000552448 PIBF1Q8WXW3 757 aa13.3□□□□□ -0.28
TUBA1C-209ENST00000552448 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
TUBA1C-209ENST00000552448 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 CD2BP2O95400 341 aaKnown RBP13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 TOM1L2Q6ZVM7 507 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 ZHX1Q9UKY1 873 aaPredicted RBP13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 KIF3AQ9Y496 699 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 TPM3P06753 285 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 SDSP20132 328 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 DNTTIP2Q5QJE6 756 aaKnown RBP13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 TSPY26PQ9H489 355 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 DBF4Q9UBU7 674 aaPredicted RBP13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 MRC1P22897 1456 aa13.29□□□□□ -0.28
TUBA1C-209ENST00000552448 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 PRPF40AO75400 957 aaKnown RBP13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 PHKG2P15735 406 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 EVA1CP58658 441 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 PI4KAP1Q8N8J0 262 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 DNAAF4Q8WXU2 420 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 FEZ1Q99689 392 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 ADCY9O60503 1353 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
TUBA1C-209ENST00000552448 ANXA1P04083 346 aa13.27□□□□□ -0.28
TUBA1C-209ENST00000552448 PDE1AP54750 535 aa13.27□□□□□ -0.28
TUBA1C-209ENST00000552448 DCAF5Q96JK2 942 aa13.27□□□□□ -0.28
TUBA1C-209ENST00000552448 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.28
TUBA1C-209ENST00000552448 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 MCM2P49736 904 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 GPT2Q8TD30 523 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 SSH3Q8TE77 659 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 SPTLC3Q9NUV7 552 aa13.27□□□□□ -0.29
TUBA1C-209ENST00000552448 KDM6AO15550 1401 aaPredicted RBP13.26□□□□□ -0.29
TUBA1C-209ENST00000552448 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
TUBA1C-209ENST00000552448 IL2RBP14784 551 aa13.26□□□□□ -0.29
TUBA1C-209ENST00000552448 CHAF1AQ13111 956 aaPredicted RBP13.26□□□□□ -0.29
TUBA1C-209ENST00000552448 NOLC1Q14978 699 aaKnown RBP eCLIP13.26□□□□□ -0.293e-8■□□□□ 10.8
TUBA1C-209ENST00000552448 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
TUBA1C-209ENST00000552448 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.26□□□□□ -0.296e-12■■■□□ 14.6
TUBA1C-209ENST00000552448 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
TUBA1C-209ENST00000552448 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
TUBA1C-209ENST00000552448 POLA2Q14181 598 aa13.25□□□□□ -0.29
TUBA1C-209ENST00000552448 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
TUBA1C-209ENST00000552448 SYCE3A1L190 88 aa13.25□□□□□ -0.29
TUBA1C-209ENST00000552448 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
TUBA1C-209ENST00000552448 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 SYCP1Q15431 976 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 PDCL2Q8N4E4 241 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 TMEM63CQ9P1W3 806 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 TUBGCP6Q96RT7 1819 aa13.24□□□□□ -0.29
TUBA1C-209ENST00000552448 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 ZNF710Q8N1W2 664 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 STAP2Q9UGK3 403 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 CYP27B1O15528 508 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 MX1P20591 662 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 PDE4CQ08493 712 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 PDIA6Q15084 440 aa13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
TUBA1C-209ENST00000552448 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms