RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MYD88Q99836 296 aa17.17■□□□□ 0.34
RAB3IP-216ENST00000552199 UBR2Q8IWV8 1755 aa17.17■□□□□ 0.34
RAB3IP-216ENST00000552199 GCKRQ14397 625 aa17.16■□□□□ 0.34
RAB3IP-216ENST00000552199 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
RAB3IP-216ENST00000552199 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
RAB3IP-216ENST00000552199 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
RAB3IP-216ENST00000552199 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
RAB3IP-216ENST00000552199 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
RAB3IP-216ENST00000552199 ERC1Q8IUD2 1116 aa17.15■□□□□ 0.34
RAB3IP-216ENST00000552199 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-216ENST00000552199 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
RAB3IP-216ENST00000552199 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
RAB3IP-216ENST00000552199 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
RAB3IP-216ENST00000552199 AK9Q5TCS8 1911 aa17.14■□□□□ 0.34
RAB3IP-216ENST00000552199 ARFGEF2Q9Y6D5 1785 aa17.14■□□□□ 0.33
RAB3IP-216ENST00000552199 AFDNP55196 1824 aaKnown RBP17.13■□□□□ 0.33
RAB3IP-216ENST00000552199 CLASRPQ8N2M8 674 aaKnown RBP17.13■□□□□ 0.33
RAB3IP-216ENST00000552199 KCPQ6ZWJ8 1503 aa17.13■□□□□ 0.33
RAB3IP-216ENST00000552199 TTC41PQ6P2S7 1318 aa17.13■□□□□ 0.33
RAB3IP-216ENST00000552199 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
RAB3IP-216ENST00000552199 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
RAB3IP-216ENST00000552199 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 NBPF14Q5TI25 921 aa17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 GSE1Q14687 1217 aa17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
RAB3IP-216ENST00000552199 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 GLRX3O76003 335 aaKnown RBP17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 HSP90AA1P07900 732 aaKnown RBP17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 COL15A1P39059 1388 aa17.1■□□□□ 0.33
RAB3IP-216ENST00000552199 SASH1O94885 1247 aa17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 EPB41L2O43491 1005 aaKnown RBP17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 IFIT2P09913 472 aaKnown RBP17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 MCCP23508 829 aa17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 ROBO1Q9Y6N7 1651 aa17.09■□□□□ 0.33
RAB3IP-216ENST00000552199 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.33
RAB3IP-216ENST00000552199 ST18O60284 1047 aa17.08■□□□□ 0.33
RAB3IP-216ENST00000552199 A1BGP04217 495 aa17.08■□□□□ 0.33
RAB3IP-216ENST00000552199 MCM4P33991 863 aa17.08■□□□□ 0.33
RAB3IP-216ENST00000552199 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.33
RAB3IP-216ENST00000552199 AACSQ86V21 672 aa17.08■□□□□ 0.32
RAB3IP-216ENST00000552199 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 A0A087WZG4 1122 aa17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 ANAPC15P60006 121 aa17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 TMOD3Q9NYL9 352 aa17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
RAB3IP-216ENST00000552199 CASP7P55210 303 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 RABL6Q3YEC7 729 aaPredicted RBP17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 IL17RAQ96F46 866 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 SGSM2O43147 1006 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 RFX5P48382 616 aaPredicted RBP17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 SIL1Q9H173 461 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 IL25Q9H293 177 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.06■□□□□ 0.32
RAB3IP-216ENST00000552199 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
RAB3IP-216ENST00000552199 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
RAB3IP-216ENST00000552199 KLHDC4Q8TBB5 520 aa17.05■□□□□ 0.32
RAB3IP-216ENST00000552199 H7C1W4 665 aa17.04■□□□□ 0.32
RAB3IP-216ENST00000552199 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
RAB3IP-216ENST00000552199 PIGBQ92521 554 aa17.04■□□□□ 0.32
RAB3IP-216ENST00000552199 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
RAB3IP-216ENST00000552199 COL16A1Q07092 1604 aaPredicted RBP17.04■□□□□ 0.32
RAB3IP-216ENST00000552199 ITGB4P16144 1822 aa17.03■□□□□ 0.32
RAB3IP-216ENST00000552199 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
RAB3IP-216ENST00000552199 TNPO1Q92973 898 aaKnown RBP17.03■□□□□ 0.32
RAB3IP-216ENST00000552199 CWC25Q9NXE8 425 aaPredicted RBP17.03■□□□□ 0.32
RAB3IP-216ENST00000552199 HSPA4P34932 840 aa17.02■□□□□ 0.32
RAB3IP-216ENST00000552199 NEK4P51957 841 aa17.02■□□□□ 0.32
RAB3IP-216ENST00000552199 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
RAB3IP-216ENST00000552199 EVI5LQ96CN4 794 aa17.02■□□□□ 0.32
RAB3IP-216ENST00000552199 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
RAB3IP-216ENST00000552199 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
RAB3IP-216ENST00000552199 PLCH1Q4KWH8 1693 aa17.02■□□□□ 0.31
RAB3IP-216ENST00000552199 TJP1Q07157 1748 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 MCM2P49736 904 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 FOXO4P98177 505 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 CCDC191Q8NCU4 936 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 DIAPH3Q9NSV4 1193 aa17.01■□□□□ 0.31
RAB3IP-216ENST00000552199 RAD50Q92878 1312 aa17■□□□□ 0.31
RAB3IP-216ENST00000552199 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms