RNA–Protein interactions for RNA: ENST00000551644.5

PRKD1-208, Transcript of protein kinase D1, human

TSL 4

Gene PRKD1, Length 560 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD1-208	ENST00000551644	POTEC	B2RU33	542 aa		13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	EIF5	P55010	431 aa	Known RBP	13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	TAF7	Q15545	349 aa	Predicted RBP	13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	BICDL1	Q6ZP65	573 aa		13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	RTF1	Q92541	710 aa	Known RBP	13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	CNKSR1	Q969H4	720 aa		13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	ADAMTS8	Q9UP79	889 aa		13.24	□□□□□ -0.29
PRKD1-208	ENST00000551644	HEG1	Q9ULI3	1381 aa		13.23	□□□□□ -0.29
PRKD1-208	ENST00000551644	BTBD11	A6QL63	1104 aa		13.23	□□□□□ -0.29
PRKD1-208	ENST00000551644	C21orf2	O43822	256 aa		13.23	□□□□□ -0.29
PRKD1-208	ENST00000551644	TMPO	P42166	694 aa	Known RBP	13.23	□□□□□ -0.29
PRKD1-208	ENST00000551644	ST5	P78524	1137 aa		13.23	□□□□□ -0.29
PRKD1-208	ENST00000551644	AIDA	Q96BJ3	306 aa		13.23	□□□□□ -0.29
PRKD1-208	ENST00000551644	TBC1D9B	Q66K14	1250 aa		13.22	□□□□□ -0.29
PRKD1-208	ENST00000551644	STYK1	Q6J9G0	422 aa		13.22	□□□□□ -0.29
PRKD1-208	ENST00000551644	CNBD1	Q8NA66	436 aa		13.22	□□□□□ -0.29
PRKD1-208	ENST00000551644	CNTNAP1	P78357	1384 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	DICER1	Q9UPY3	1922 aa	Known RBP	13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	FER1L6	Q2WGJ9	1857 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	NEFM	P07197	916 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	IL6ST	P40189	918 aa	Predicted RBP	13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	CCDC184	Q52MB2	194 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	PRR5L	Q6MZQ0	368 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	LDHD	Q86WU2	507 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	RUNDC1	Q96C34	613 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	FMNL2	Q96PY5	1086 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	SETDB2	Q96T68	719 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	PRDM10	Q9NQV6	1147 aa		13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	MKRN1	Q9UHC7	482 aa	Known RBP	13.21	□□□□□ -0.29
PRKD1-208	ENST00000551644	CCDC88A	Q3V6T2	1871 aa		13.21	□□□□□ -0.3
PRKD1-208	ENST00000551644	RIPK4	P57078	832 aa		13.2	□□□□□ -0.3
PRKD1-208	ENST00000551644	PRPF40B	Q6NWY9	871 aa	Known RBP	13.2	□□□□□ -0.3
PRKD1-208	ENST00000551644	MASTL	Q96GX5	879 aa		13.2	□□□□□ -0.3
PRKD1-208	ENST00000551644	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.2	□□□□□ -0.3
PRKD1-208	ENST00000551644	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.2	□□□□□ -0.3
PRKD1-208	ENST00000551644	USP16	Q9Y5T5	823 aa		13.2	□□□□□ -0.3
PRKD1-208	ENST00000551644	COL11A2	P13942	1736 aa	Predicted RBP	13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	ANKRD31	Q8N7Z5	1873 aa		13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	DDN	O94850	711 aa	Predicted RBP	13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	CTCF	P49711	727 aa	Predicted RBP	13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	BABAM1	Q9NWV8	329 aa		13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	TRIM35	Q9UPQ4	493 aa		13.19	□□□□□ -0.3
PRKD1-208	ENST00000551644	MAPK8IP3	Q9UPT6	1336 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	ARFGEF2	Q9Y6D5	1785 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	TMEM88B	A6NKF7	163 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	SNRPA1	P09661	255 aa	Known RBP	13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	SRGN	P10124	158 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	CCDC93	Q567U6	631 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	PNISR	Q8TF01	805 aa	Known RBP	13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	THUMPD2	Q9BTF0	503 aa	Known RBP	13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	MIS18A	Q9NYP9	233 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	SCN4A	P35499	1836 aa		13.18	□□□□□ -0.3
PRKD1-208	ENST00000551644	PASK	Q96RG2	1323 aa		13.17	□□□□□ -0.3
PRKD1-208	ENST00000551644	FOXN1	O15353	648 aa		13.17	□□□□□ -0.3
PRKD1-208	ENST00000551644	EIF4A1	P60842	406 aa	Known RBP	13.17	□□□□□ -0.3
PRKD1-208	ENST00000551644	WDR43	Q15061	677 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
PRKD1-208	ENST00000551644	TBC1D2B	Q9UPU7	963 aa		13.17	□□□□□ -0.3
PRKD1-208	ENST00000551644	ZNF652	Q9Y2D9	606 aa		13.17	□□□□□ -0.3
PRKD1-208	ENST00000551644	PRAMEF22	A3QJZ6	481 aa		13.16	□□□□□ -0.3
PRKD1-208	ENST00000551644	CAMTA2	O94983	1202 aa		13.16	□□□□□ -0.3
PRKD1-208	ENST00000551644	A1BG	P04217	495 aa		13.16	□□□□□ -0.3
PRKD1-208	ENST00000551644	CCDC146	Q8IYE0	955 aa		13.16	□□□□□ -0.3
PRKD1-208	ENST00000551644	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.16	□□□□□ -0.3
PRKD1-208	ENST00000551644	KDM3B	Q7LBC6	1761 aa		13.16	□□□□□ -0.3
PRKD1-208	ENST00000551644	BCOR	Q6W2J9	1755 aa		13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	CHL1	O00533	1208 aa		13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	NPR1	P16066	1061 aa		13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	CLEC4G	Q6UXB4	293 aa		13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	PNMA8A	Q86V59	439 aa	Predicted RBP	13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	DZIP3	Q86Y13	1208 aa	Known RBP	13.15	□□□□□ -0.3
PRKD1-208	ENST00000551644	NBPF26	B4DH59	902 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	RGL2	O15211	777 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	ANP32C	O43423	234 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	POTEI	P0CG38	1075 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	POTEJ	P0CG39	1038 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	LMOD3	Q0VAK6	560 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	NCBP3	Q53F19	620 aa	Known RBP	13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	NBPF10	Q6P3W6	841 aa	Known RBP	13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	RTKN2	Q8IZC4	609 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	CCDC24	Q8N4L8	307 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	NBPF15	Q8N660	670 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	HACL1	Q9UJ83	578 aa		13.14	□□□□□ -0.31
PRKD1-208	ENST00000551644	VEGFB	P49765	207 aa		13.13	□□□□□ -0.31
PRKD1-208	ENST00000551644	EAPP	Q56P03	285 aa	Predicted RBP	13.13	□□□□□ -0.31
PRKD1-208	ENST00000551644	CLEC11A	Q9Y240	323 aa		13.13	□□□□□ -0.31
PRKD1-208	ENST00000551644	RRP7A	Q9Y3A4	280 aa	Known RBP	13.13	□□□□□ -0.31
PRKD1-208	ENST00000551644	SLX4	Q8IY92	1834 aa		13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	APAF1	O14727	1248 aa		13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	ZNF853	P0CG23	659 aa		13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	EPHX2	P34913	555 aa		13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	MAP2K1	Q02750	393 aa	Predicted RBP	13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	TPTE2	Q6XPS3	522 aa		13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	WBP1L	Q9NX94	342 aa		13.12	□□□□□ -0.31
PRKD1-208	ENST00000551644	CACNA1S	Q13698	1873 aa		13.11	□□□□□ -0.31
PRKD1-208	ENST00000551644	KLRG2	A4D1S0	409 aa	Predicted RBP	13.11	□□□□□ -0.31
PRKD1-208	ENST00000551644	RASSF10	A6NK89	507 aa		13.11	□□□□□ -0.31
PRKD1-208	ENST00000551644	ITGBL1	O95965	494 aa	Predicted RBP	13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms