RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 GDF10P55107 478 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 USP17L24Q0WX57 530 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 CRTC2Q53ET0 693 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-215ENST00000551391 CDCA8Q53HL2 280 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 SUV39H2Q9H5I1 410 aa6.66□□□□□ -1.34
SCAF11-215ENST00000551391 NBPF1Q3BBV0 1214 aa6.65□□□□□ -1.34
SCAF11-215ENST00000551391 CCDC102BQ68D86 513 aa6.65□□□□□ -1.34
SCAF11-215ENST00000551391 ANKMY2Q8IV38 441 aa6.65□□□□□ -1.34
SCAF11-215ENST00000551391 GJA3Q9Y6H8 435 aa6.65□□□□□ -1.34
SCAF11-215ENST00000551391 C1QTNF9BB2RNN3 333 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 M0R2N6 131 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 TATP17735 454 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-215ENST00000551391 ADH6P28332 368 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 SMTNP53814 917 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 PDE4CQ08493 712 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 PRR12Q9ULL5 1215 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 KIAA1024Q9UPX6 916 aa6.64□□□□□ -1.35
SCAF11-215ENST00000551391 A0A1W2PNR3 127 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 DCDC2BA2VCK2 349 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 KHNYNO15037 678 aaKnown RBP6.63□□□□□ -1.35
SCAF11-215ENST00000551391 HOXB4P17483 251 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-215ENST00000551391 DGKGP49619 791 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 SCNN1DP51172 638 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 CHSY3Q70JA7 882 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 TPCN2Q8NHX9 752 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 FAM200AQ8TCP9 573 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 ZMIZ1Q9ULJ6 1067 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 NOVA2Q9UNW9 492 aaKnown RBP6.63□□□□□ -1.35
SCAF11-215ENST00000551391 USTQ9Y2C2 406 aa6.63□□□□□ -1.35
SCAF11-215ENST00000551391 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
SCAF11-215ENST00000551391 TMEM229AB2RXF0 380 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 MAPTP10636 758 aaKnown RBP6.62□□□□□ -1.35
SCAF11-215ENST00000551391 SEC13P55735 322 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 PSME1Q06323 249 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 DPYDQ12882 1025 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 FAM182BQ5T319 152 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 HOMEZQ8IX15 550 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 ZNF594Q96JF6 807 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-215ENST00000551391 SLC4A9Q96Q91 983 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 AVENQ9NQS1 362 aaPredicted RBP6.62□□□□□ -1.35
SCAF11-215ENST00000551391 SERTAD1Q9UHV2 236 aa6.62□□□□□ -1.35
SCAF11-215ENST00000551391 BACH1O14867 736 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 CD33P20138 364 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 ATP4AP20648 1035 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 TNP2Q05952 138 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 SWI5Q1ZZU3 235 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 BICDL1Q6ZP65 573 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 CD163Q86VB7 1156 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 Q8N3U1 123 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 CABP1Q9NZU7 370 aa6.61□□□□□ -1.35
SCAF11-215ENST00000551391 TMEM88BA6NKF7 163 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 CDK2AP1O14519 115 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 ALAS2P22557 587 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 PCBP4P57723 403 aaKnown RBP6.6□□□□□ -1.35
SCAF11-215ENST00000551391 FAM69CQ0P6D2 419 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 RETREG2Q8NC44 543 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 ZNF358Q9NW07 568 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 ZDHHC3Q9NYG2 299 aa6.6□□□□□ -1.35
SCAF11-215ENST00000551391 A6NJY4 79 aa6.59□□□□□ -1.35
SCAF11-215ENST00000551391 SFI1A8K8P3 1242 aa6.59□□□□□ -1.35
SCAF11-215ENST00000551391 CHRNA4P43681 627 aa6.59□□□□□ -1.35
SCAF11-215ENST00000551391 TMEM164Q5U3C3 297 aa6.59□□□□□ -1.35
SCAF11-215ENST00000551391 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
SCAF11-215ENST00000551391 STK32AQ8WU08 396 aa6.59□□□□□ -1.35
SCAF11-215ENST00000551391 SPDYE3A6NKU9 549 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 DOC2BQ14184 412 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 MTFR1Q15390 333 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 CLP1Q92989 425 aaKnown RBP6.58□□□□□ -1.36
SCAF11-215ENST00000551391 ZIC5Q96T25 663 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 SEMA6BQ9H3T3 888 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 NEUROD4Q9HD90 331 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 MARK1Q9P0L2 795 aa6.58□□□□□ -1.36
SCAF11-215ENST00000551391 FAM157BP0CG42 384 aa6.57□□□□□ -1.36
SCAF11-215ENST00000551391 GATA4P43694 442 aa6.57□□□□□ -1.36
SCAF11-215ENST00000551391 EPHA4P54764 986 aa6.57□□□□□ -1.36
SCAF11-215ENST00000551391 ZNF468Q5VIY5 522 aaPredicted RBP6.57□□□□□ -1.36
SCAF11-215ENST00000551391 FCHSD1Q86WN1 690 aa6.57□□□□□ -1.36
SCAF11-215ENST00000551391 TRAIPQ9BWF2 469 aa6.57□□□□□ -1.36
SCAF11-215ENST00000551391 KLF15Q9UIH9 416 aa6.57□□□□□ -1.36
SCAF11-215ENST00000551391 SPATA31C1P0DKV0 1188 aa6.56□□□□□ -1.36
SCAF11-215ENST00000551391 LAMC2Q13753 1193 aa6.56□□□□□ -1.36
SCAF11-215ENST00000551391 PRRT3Q5FWE3 981 aa6.56□□□□□ -1.36
SCAF11-215ENST00000551391 GAS2L2Q8NHY3 880 aa6.56□□□□□ -1.36
SCAF11-215ENST00000551391 SCHIP1Q9P0W5 487 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-215ENST00000551391 APBA3O96018 575 aa6.55□□□□□ -1.36
SCAF11-215ENST00000551391 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
SCAF11-215ENST00000551391 TSEN2Q8NCE0 465 aaKnown RBP6.55□□□□□ -1.36
SCAF11-215ENST00000551391 PARP3Q9Y6F1 533 aa6.55□□□□□ -1.36
SCAF11-215ENST00000551391 ELOA3CA0A087WX78 387 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-215ENST00000551391 ELOA3DA6NLF2 546 aaPredicted RBP6.54□□□□□ -1.36
SCAF11-215ENST00000551391 PDIA4P13667 645 aaKnown RBP6.54□□□□□ -1.36
SCAF11-215ENST00000551391 WEE1P30291 646 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 ELOA3BQ3SY89 546 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 SYT9Q86SS6 491 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 TNS4Q8IZW8 715 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 ELOA3Q8NG57 546 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 TRIM11Q96F44 468 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 HINFPQ9BQA5 517 aa6.54□□□□□ -1.36
SCAF11-215ENST00000551391 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms