RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
RAB5C-208ENST00000551338 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
RAB5C-208ENST00000551338 KIF2CQ99661 725 aa14.19□□□□□ -0.14
RAB5C-208ENST00000551338 IL1RAPL2Q9NP60 686 aa14.19□□□□□ -0.14
RAB5C-208ENST00000551338 HDAC5Q9UQL6 1122 aa14.19□□□□□ -0.14
RAB5C-208ENST00000551338 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
RAB5C-208ENST00000551338 KIF1BPQ96EK5 621 aa14.18□□□□□ -0.14
RAB5C-208ENST00000551338 USP35Q9P2H5 1018 aa14.18□□□□□ -0.14
RAB5C-208ENST00000551338 COL15A1P39059 1388 aa14.18□□□□□ -0.14
RAB5C-208ENST00000551338 CICQ96RK0 1608 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-208ENST00000551338 EIF5BO60841 1220 aaKnown RBP14.17□□□□□ -0.14
RAB5C-208ENST00000551338 GCKRQ14397 625 aa14.17□□□□□ -0.14
RAB5C-208ENST00000551338 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
RAB5C-208ENST00000551338 NUP98P52948 1817 aa14.17□□□□□ -0.14
RAB5C-208ENST00000551338 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
RAB5C-208ENST00000551338 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
RAB5C-208ENST00000551338 SNX21Q969T3 373 aa14.16□□□□□ -0.14
RAB5C-208ENST00000551338 BICC1Q9H694 974 aaKnown RBP14.16□□□□□ -0.14
RAB5C-208ENST00000551338 RREB1Q92766 1687 aa14.16□□□□□ -0.14
RAB5C-208ENST00000551338 USP42Q9H9J4 1324 aaKnown RBP14.15□□□□□ -0.14
RAB5C-208ENST00000551338 MYH3P11055 1940 aa14.15□□□□□ -0.14
RAB5C-208ENST00000551338 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
RAB5C-208ENST00000551338 TMOD3Q9NYL9 352 aa14.15□□□□□ -0.14
RAB5C-208ENST00000551338 PA2G4Q9UQ80 394 aaKnown RBP14.15□□□□□ -0.14
RAB5C-208ENST00000551338 BCL9O00512 1426 aa14.15□□□□□ -0.14
RAB5C-208ENST00000551338 PTCD1O75127 700 aaKnown RBP14.14□□□□□ -0.15
RAB5C-208ENST00000551338 EPHA10Q5JZY3 1008 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 CASC1Q6TDU7 716 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 TTLL7Q6ZT98 887 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 PI4K2BQ8TCG2 481 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 USP26Q9BXU7 913 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 ANTXR1Q9H6X2 564 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 SLIT2O94813 1529 aa14.14□□□□□ -0.15
RAB5C-208ENST00000551338 A1BGP04217 495 aa14.13□□□□□ -0.15
RAB5C-208ENST00000551338 CASP7P55210 303 aa14.13□□□□□ -0.15
RAB5C-208ENST00000551338 MYT1Q01538 1121 aa14.13□□□□□ -0.15
RAB5C-208ENST00000551338 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
RAB5C-208ENST00000551338 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
RAB5C-208ENST00000551338 ERC2O15083 957 aa14.12□□□□□ -0.15
RAB5C-208ENST00000551338 OS9Q13438 667 aaPredicted RBP14.12□□□□□ -0.15
RAB5C-208ENST00000551338 ERC1Q8IUD2 1116 aa14.12□□□□□ -0.15
RAB5C-208ENST00000551338 PIGBQ92521 554 aa14.12□□□□□ -0.15
RAB5C-208ENST00000551338 SLKQ9H2G2 1235 aaPredicted RBP14.12□□□□□ -0.15
RAB5C-208ENST00000551338 ATG3Q9NT62 314 aa14.12□□□□□ -0.15
RAB5C-208ENST00000551338 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 SASH1O94885 1247 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 COL5A3P25940 1745 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-208ENST00000551338 CHMLP26374 656 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 NFKBIBQ15653 356 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 RABL6Q3YEC7 729 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-208ENST00000551338 RTL5Q5HYW3 569 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-208ENST00000551338 DNAJC10Q8IXB1 793 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 ESYT1Q9BSJ8 1104 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 ASAP1Q9ULH1 1129 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 SPATA31A1Q5TZJ5 1347 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 TTC41PQ6P2S7 1318 aa14.11□□□□□ -0.15
RAB5C-208ENST00000551338 TRIM6-TRIM34B2RNG4 842 aa14.1□□□□□ -0.15
RAB5C-208ENST00000551338 REC8O95072 547 aa14.1□□□□□ -0.15
RAB5C-208ENST00000551338 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
RAB5C-208ENST00000551338 RFX5P48382 616 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-208ENST00000551338 UBE3BQ7Z3V4 1068 aa14.1□□□□□ -0.15
RAB5C-208ENST00000551338 VSIG10Q8N0Z9 540 aa14.1□□□□□ -0.15
RAB5C-208ENST00000551338 JARID2Q92833 1246 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-208ENST00000551338 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
RAB5C-208ENST00000551338 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
RAB5C-208ENST00000551338 A0A087WZG4 1122 aa14.09□□□□□ -0.15
RAB5C-208ENST00000551338 H7C1W4 665 aa14.09□□□□□ -0.15
RAB5C-208ENST00000551338 ADAMTS2O95450 1211 aa14.09□□□□□ -0.15
RAB5C-208ENST00000551338 CLASRPQ8N2M8 674 aaKnown RBP14.09□□□□□ -0.15
RAB5C-208ENST00000551338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.09□□□□□ -0.15
RAB5C-208ENST00000551338 ZNF831Q5JPB2 1677 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 EXOC5O00471 708 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 G3BP1Q13283 466 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB5C-208ENST00000551338 RABEP1Q15276 862 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 ZBTB3Q9H5J0 574 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 COPRSQ9NQ92 184 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 BCORQ6W2J9 1755 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 CASZ1Q86V15 1759 aa14.08□□□□□ -0.16
RAB5C-208ENST00000551338 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 LAMB2P55268 1798 aa14.07□□□□□ -0.16
RAB5C-208ENST00000551338 GLRX3O76003 335 aaKnown RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 AACSQ86V21 672 aa14.07□□□□□ -0.16
RAB5C-208ENST00000551338 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
RAB5C-208ENST00000551338 KLHDC4Q8TBB5 520 aa14.07□□□□□ -0.16
RAB5C-208ENST00000551338 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
RAB5C-208ENST00000551338 ISCA1Q9BUE6 129 aa14.07□□□□□ -0.16
RAB5C-208ENST00000551338 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 TEX13AQ9BXU3 409 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 CWC25Q9NXE8 425 aaPredicted RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 THRAP3Q9Y2W1 955 aaKnown RBP14.07□□□□□ -0.16
RAB5C-208ENST00000551338 TOM1O60784 492 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 DDIT3P35638 169 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 FOXO4P98177 505 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 EAF2Q96CJ1 260 aaPredicted RBP14.06□□□□□ -0.16
RAB5C-208ENST00000551338 SIL1Q9H173 461 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 IL25Q9H293 177 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 ECHDC1Q9NTX5 307 aa14.06□□□□□ -0.16
RAB5C-208ENST00000551338 SPATA31A5Q5VU36 1347 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms