RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 CACNA1SQ13698 1873 aa25.05■■□□□ 1.6
RPAP3-207ENST00000551293 STYK1Q6J9G0 422 aa25.05■■□□□ 1.6
RPAP3-207ENST00000551293 DZIP3Q86Y13 1208 aaKnown RBP25.05■■□□□ 1.6
RPAP3-207ENST00000551293 LTBP3Q9NS15 1303 aa25.05■■□□□ 1.6
RPAP3-207ENST00000551293 FOXN1O15353 648 aa25.04■■□□□ 1.6
RPAP3-207ENST00000551293 OLFM4Q6UX06 510 aa25.04■■□□□ 1.6
RPAP3-207ENST00000551293 MASTLQ96GX5 879 aa25.04■■□□□ 1.6
RPAP3-207ENST00000551293 DICER1Q9UPY3 1922 aaKnown RBP25.04■■□□□ 1.6
RPAP3-207ENST00000551293 PRAMEF22A3QJZ6 481 aa25.03■■□□□ 1.6
RPAP3-207ENST00000551293 GAS2L2Q8NHY3 880 aa25.03■■□□□ 1.6
RPAP3-207ENST00000551293 PER1O15534 1290 aaPredicted RBP25.02■■□□□ 1.6
RPAP3-207ENST00000551293 EAPPQ56P03 285 aaPredicted RBP25.02■■□□□ 1.6
RPAP3-207ENST00000551293 FAM177BA6PVY3 158 aa25.01■■□□□ 1.59
RPAP3-207ENST00000551293 BTBD11A6QL63 1104 aa25.01■■□□□ 1.59
RPAP3-207ENST00000551293 NBPF5PQ86XG9 351 aaPredicted RBP25.01■■□□□ 1.59
RPAP3-207ENST00000551293 TAF1DQ9H5J8 278 aaPredicted RBP25.01■■□□□ 1.59
RPAP3-207ENST00000551293 ZNF277Q9NRM2 450 aaPredicted RBP25.01■■□□□ 1.59
RPAP3-207ENST00000551293 USP16Q9Y5T5 823 aa25.01■■□□□ 1.59
RPAP3-207ENST00000551293 COL3A1P02461 1466 aaPredicted RBP25.01■■□□□ 1.59
RPAP3-207ENST00000551293 PHACTR3Q96KR7 559 aa25■■□□□ 1.59
RPAP3-207ENST00000551293 ZNF541Q9H0D2 1346 aa25■■□□□ 1.59
RPAP3-207ENST00000551293 CNTNAP1P78357 1384 aa25■■□□□ 1.59
RPAP3-207ENST00000551293 LDHDQ86WU2 507 aa24.99■■□□□ 1.59
RPAP3-207ENST00000551293 CLEC11AQ9Y240 323 aa24.99■■□□□ 1.59
RPAP3-207ENST00000551293 SIPA1L3O60292 1781 aaPredicted RBP24.98■■□□□ 1.59
RPAP3-207ENST00000551293 PASKQ96RG2 1323 aa24.98■■□□□ 1.59
RPAP3-207ENST00000551293 IQCA1LA6NCM1 817 aa24.98■■□□□ 1.59
RPAP3-207ENST00000551293 CCDC93Q567U6 631 aa24.98■■□□□ 1.59
RPAP3-207ENST00000551293 SOGA3Q5TF21 947 aa24.98■■□□□ 1.59
RPAP3-207ENST00000551293 CCER1Q8TC90 406 aaPredicted RBP24.98■■□□□ 1.59
RPAP3-207ENST00000551293 C7orf43Q8WVR3 580 aa24.98■■□□□ 1.59
RPAP3-207ENST00000551293 VEGFBP49765 207 aa24.97■■□□□ 1.59
RPAP3-207ENST00000551293 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
RPAP3-207ENST00000551293 L3MBTL3Q96JM7 780 aaPredicted RBP24.95■■□□□ 1.58
RPAP3-207ENST00000551293 BCORQ6W2J9 1755 aa24.95■■□□□ 1.58
RPAP3-207ENST00000551293 CEMIPQ8WUJ3 1361 aa24.94■■□□□ 1.58
RPAP3-207ENST00000551293 TMEM88BA6NKF7 163 aa24.94■■□□□ 1.58
RPAP3-207ENST00000551293 NPR1P16066 1061 aa24.94■■□□□ 1.58
RPAP3-207ENST00000551293 FKBP4Q02790 459 aaKnown RBP eCLIP24.94■■□□□ 1.58
RPAP3-207ENST00000551293 AIDAQ96BJ3 306 aa24.94■■□□□ 1.58
RPAP3-207ENST00000551293 ITGBL1O95965 494 aaPredicted RBP24.93■■□□□ 1.58
RPAP3-207ENST00000551293 MCM10Q7L590 875 aa24.93■■□□□ 1.58
RPAP3-207ENST00000551293 HACL1Q9UJ83 578 aa24.93■■□□□ 1.58
RPAP3-207ENST00000551293 NIP7Q9Y221 180 aaKnown RBP eCLIP24.93■■□□□ 1.58
RPAP3-207ENST00000551293 RNF123Q5XPI4 1314 aa24.92■■□□□ 1.58
RPAP3-207ENST00000551293 MAP1SQ66K74 1059 aaPredicted RBP24.92■■□□□ 1.58
RPAP3-207ENST00000551293 ARFGEF2Q9Y6D5 1785 aa24.92■■□□□ 1.58
RPAP3-207ENST00000551293 EPHX2P34913 555 aa24.91■■□□□ 1.58
RPAP3-207ENST00000551293 ZNF652Q9Y2D9 606 aa24.91■■□□□ 1.58
RPAP3-207ENST00000551293 NBPF26B4DH59 902 aa24.9■■□□□ 1.58
RPAP3-207ENST00000551293 CTCFP49711 727 aaPredicted RBP24.9■■□□□ 1.58
RPAP3-207ENST00000551293 LBX1P52954 281 aa24.9■■□□□ 1.58
RPAP3-207ENST00000551293 DCTN1Q14203 1278 aa24.9■■□□□ 1.58
RPAP3-207ENST00000551293 NBPF10Q6P3W6 841 aaKnown RBP24.9■■□□□ 1.58
RPAP3-207ENST00000551293 NBPF15Q8N660 670 aa24.9■■□□□ 1.58
RPAP3-207ENST00000551293 RSPH6AQ9H0K4 717 aa24.9■■□□□ 1.58
RPAP3-207ENST00000551293 SNRPA1P09661 255 aaKnown RBP24.89■■□□□ 1.58
RPAP3-207ENST00000551293 CLEC4GQ6UXB4 293 aa24.89■■□□□ 1.58
RPAP3-207ENST00000551293 TPTE2Q6XPS3 522 aa24.89■■□□□ 1.58
RPAP3-207ENST00000551293 SYNE4Q8N205 404 aa24.89■■□□□ 1.58
RPAP3-207ENST00000551293 PRDM10Q9NQV6 1147 aa24.89■■□□□ 1.58
RPAP3-207ENST00000551293 HLFQ16534 295 aa24.88■■□□□ 1.57
RPAP3-207ENST00000551293 SCN4AP35499 1836 aa24.88■■□□□ 1.57
RPAP3-207ENST00000551293 GTF2E1P29083 439 aaPredicted RBP24.87■■□□□ 1.57
RPAP3-207ENST00000551293 IARSP41252 1262 aaKnown RBP24.87■■□□□ 1.57
RPAP3-207ENST00000551293 RTKN2Q8IZC4 609 aa24.87■■□□□ 1.57
RPAP3-207ENST00000551293 CNTROBQ8N137 903 aa24.87■■□□□ 1.57
RPAP3-207ENST00000551293 NGEFQ8N5V2 710 aa24.87■■□□□ 1.57
RPAP3-207ENST00000551293 KLRG2A4D1S0 409 aaPredicted RBP24.86■■□□□ 1.57
RPAP3-207ENST00000551293 RTF1Q92541 710 aaKnown RBP24.86■■□□□ 1.57
RPAP3-207ENST00000551293 WBP1LQ9NX94 342 aa24.86■■□□□ 1.57
RPAP3-207ENST00000551293 GJA3Q9Y6H8 435 aa24.86■■□□□ 1.57
RPAP3-207ENST00000551293 SLC51AQ86UW1 340 aa24.85■■□□□ 1.57
RPAP3-207ENST00000551293 MIS18AQ9NYP9 233 aa24.85■■□□□ 1.57
RPAP3-207ENST00000551293 ABT1Q9ULW3 272 aaKnown RBP24.85■■□□□ 1.57
RPAP3-207ENST00000551293 FMR1Q06787 632 aaKnown RBP eCLIP24.84■■□□□ 1.57
RPAP3-207ENST00000551293 DEFB115Q30KQ5 88 aa24.84■■□□□ 1.57
RPAP3-207ENST00000551293 NUTM1Q86Y26 1132 aa24.84■■□□□ 1.57
RPAP3-207ENST00000551293 FZD9O00144 591 aa24.83■■□□□ 1.57
RPAP3-207ENST00000551293 U2AF1L5P0DN76 240 aaPredicted RBP24.83■■□□□ 1.57
RPAP3-207ENST00000551293 U2AF1Q01081 240 aaKnown RBP eCLIP24.83■■□□□ 1.57
RPAP3-207ENST00000551293 CFAP53Q96M91 514 aa24.83■■□□□ 1.57
RPAP3-207ENST00000551293 TCERG1O14776 1098 aaKnown RBP24.82■■□□□ 1.56
RPAP3-207ENST00000551293 ALDH1B1P30837 517 aa24.82■■□□□ 1.56
RPAP3-207ENST00000551293 GRM1Q13255 1194 aa24.82■■□□□ 1.56
RPAP3-207ENST00000551293 PNMA8AQ86V59 439 aaPredicted RBP24.82■■□□□ 1.56
RPAP3-207ENST00000551293 ABCC12Q96J65 1359 aa24.81■■□□□ 1.56
RPAP3-207ENST00000551293 ADAMTSL1Q8N6G6 1762 aa24.81■■□□□ 1.56
RPAP3-207ENST00000551293 RASSF10A6NK89 507 aa24.81■■□□□ 1.56
RPAP3-207ENST00000551293 HSPA8P11142 646 aaKnown RBP24.81■■□□□ 1.56
RPAP3-207ENST00000551293 GPC2Q8N158 579 aa24.81■■□□□ 1.56
RPAP3-207ENST00000551293 WDR33Q9C0J8 1336 aaKnown RBP24.81■■□□□ 1.56
RPAP3-207ENST00000551293 PAXIP1Q6ZW49 1069 aaPredicted RBP24.8■■□□□ 1.56
RPAP3-207ENST00000551293 JDP2Q8WYK2 163 aa24.8■■□□□ 1.56
RPAP3-207ENST00000551293 NPC1L1Q9UHC9 1359 aa24.8■■□□□ 1.56
RPAP3-207ENST00000551293 COL4A5P29400 1685 aa24.79■■□□□ 1.56
RPAP3-207ENST00000551293 NUDCQ9Y266 331 aa24.78■■□□□ 1.56
RPAP3-207ENST00000551293 GPTP24298 496 aa24.77■■□□□ 1.56
RPAP3-207ENST00000551293 EIF6P56537 245 aaKnown RBP24.77■■□□□ 1.56
RPAP3-207ENST00000551293 ABHD8Q96I13 439 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms