RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 SMC5Q8IY18 1101 aa17.8■□□□□ 0.44
LETMD1-229ENST00000551261 LY75O60449 1722 aa17.8■□□□□ 0.44
LETMD1-229ENST00000551261 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
LETMD1-229ENST00000551261 AIMP1Q12904 312 aaKnown RBP17.79■□□□□ 0.44
LETMD1-229ENST00000551261 HSP90AB3PQ58FF7 597 aa17.79■□□□□ 0.44
LETMD1-229ENST00000551261 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
LETMD1-229ENST00000551261 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
LETMD1-229ENST00000551261 IGHDP01880 384 aa17.78■□□□□ 0.44
LETMD1-229ENST00000551261 A1BGP04217 495 aa17.78■□□□□ 0.44
LETMD1-229ENST00000551261 CEP85Q6P2H3 762 aa17.78■□□□□ 0.44
LETMD1-229ENST00000551261 USP44Q9H0E7 712 aa17.78■□□□□ 0.44
LETMD1-229ENST00000551261 CCDC87Q9NVE4 849 aa17.78■□□□□ 0.44
LETMD1-229ENST00000551261 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.44
LETMD1-229ENST00000551261 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.44
LETMD1-229ENST00000551261 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.44
LETMD1-229ENST00000551261 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
LETMD1-229ENST00000551261 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
LETMD1-229ENST00000551261 GRM8O00222 908 aa17.76■□□□□ 0.43
LETMD1-229ENST00000551261 KCNQ2O43526 872 aa17.76■□□□□ 0.43
LETMD1-229ENST00000551261 RXRBP28702 533 aa17.76■□□□□ 0.43
LETMD1-229ENST00000551261 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
LETMD1-229ENST00000551261 MAP3K15Q6ZN16 1313 aa17.75■□□□□ 0.43
LETMD1-229ENST00000551261 A0A087WZG4 1122 aa17.75■□□□□ 0.43
LETMD1-229ENST00000551261 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
LETMD1-229ENST00000551261 MTX1Q13505 466 aa17.75■□□□□ 0.43
LETMD1-229ENST00000551261 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
LETMD1-229ENST00000551261 ANKRD36CQ5JPF3 1778 aa17.75■□□□□ 0.43
LETMD1-229ENST00000551261 CRKLP46109 303 aaKnown RBP17.74■□□□□ 0.43
LETMD1-229ENST00000551261 GCKRQ14397 625 aa17.74■□□□□ 0.43
LETMD1-229ENST00000551261 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
LETMD1-229ENST00000551261 MYD88Q99836 296 aa17.74■□□□□ 0.43
LETMD1-229ENST00000551261 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
LETMD1-229ENST00000551261 ZBTB1Q9Y2K1 713 aa17.74■□□□□ 0.43
LETMD1-229ENST00000551261 IGKV5-2P06315 115 aa17.73■□□□□ 0.43
LETMD1-229ENST00000551261 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
LETMD1-229ENST00000551261 DCTPP1Q9H773 170 aa17.73■□□□□ 0.43
LETMD1-229ENST00000551261 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
LETMD1-229ENST00000551261 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
LETMD1-229ENST00000551261 ATP8B2P98198 1209 aa17.72■□□□□ 0.43
LETMD1-229ENST00000551261 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
LETMD1-229ENST00000551261 GIGYF2Q6Y7W6 1299 aaKnown RBP17.72■□□□□ 0.43
LETMD1-229ENST00000551261 SIRT2Q8IXJ6 389 aa17.72■□□□□ 0.43
LETMD1-229ENST00000551261 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
LETMD1-229ENST00000551261 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
LETMD1-229ENST00000551261 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
LETMD1-229ENST00000551261 BCORQ6W2J9 1755 aa17.71■□□□□ 0.43
LETMD1-229ENST00000551261 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
LETMD1-229ENST00000551261 NUCB1Q02818 461 aa17.71■□□□□ 0.43
LETMD1-229ENST00000551261 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
LETMD1-229ENST00000551261 ITPK1Q13572 414 aa17.71■□□□□ 0.43
LETMD1-229ENST00000551261 CWF19L2Q2TBE0 894 aaKnown RBP17.71■□□□□ 0.43
LETMD1-229ENST00000551261 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
LETMD1-229ENST00000551261 INTS5Q6P9B9 1019 aaKnown RBP17.71■□□□□ 0.43
LETMD1-229ENST00000551261 TTLL7Q6ZT98 887 aa17.71■□□□□ 0.43
LETMD1-229ENST00000551261 TAF1LQ8IZX4 1826 aa17.7■□□□□ 0.42
LETMD1-229ENST00000551261 NBPF7P0C2Y1 421 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-229ENST00000551261 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
LETMD1-229ENST00000551261 SSH3Q8TE77 659 aa17.7■□□□□ 0.42
LETMD1-229ENST00000551261 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
LETMD1-229ENST00000551261 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
LETMD1-229ENST00000551261 ZNF652Q9Y2D9 606 aa17.7■□□□□ 0.42
LETMD1-229ENST00000551261 SCN7AQ01118 1682 aa17.7■□□□□ 0.42
LETMD1-229ENST00000551261 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
LETMD1-229ENST00000551261 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
LETMD1-229ENST00000551261 C4BP0C0L5 1744 aa17.68■□□□□ 0.42
LETMD1-229ENST00000551261 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
LETMD1-229ENST00000551261 POLA2Q14181 598 aa17.68■□□□□ 0.42
LETMD1-229ENST00000551261 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
LETMD1-229ENST00000551261 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
LETMD1-229ENST00000551261 RAB11FIP3O75154 756 aa17.67■□□□□ 0.42
LETMD1-229ENST00000551261 CLEC4GQ6UXB4 293 aa17.67■□□□□ 0.42
LETMD1-229ENST00000551261 MYH14Q7Z406 1995 aaKnown RBP17.66■□□□□ 0.42
LETMD1-229ENST00000551261 H7C1W4 665 aa17.66■□□□□ 0.42
LETMD1-229ENST00000551261 ADRA2BP18089 450 aa17.66■□□□□ 0.42
LETMD1-229ENST00000551261 PARP10Q53GL7 1025 aa17.66■□□□□ 0.42
LETMD1-229ENST00000551261 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
LETMD1-229ENST00000551261 CDHR2Q9BYE9 1310 aa17.66■□□□□ 0.42
LETMD1-229ENST00000551261 NUP98P52948 1817 aa17.65■□□□□ 0.42
LETMD1-229ENST00000551261 SRGAP3O43295 1099 aa17.65■□□□□ 0.42
LETMD1-229ENST00000551261 RPS6KA4O75676 772 aa17.65■□□□□ 0.42
LETMD1-229ENST00000551261 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-229ENST00000551261 RABL6Q3YEC7 729 aaPredicted RBP17.65■□□□□ 0.42
LETMD1-229ENST00000551261 ERC1Q8IUD2 1116 aa17.65■□□□□ 0.42
LETMD1-229ENST00000551261 AK7Q96M32 723 aa17.65■□□□□ 0.42
LETMD1-229ENST00000551261 PLSCR1O15162 318 aa17.64■□□□□ 0.41
LETMD1-229ENST00000551261 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
LETMD1-229ENST00000551261 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
LETMD1-229ENST00000551261 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
LETMD1-229ENST00000551261 CASP7P55210 303 aa17.63■□□□□ 0.41
LETMD1-229ENST00000551261 UBE3BQ7Z3V4 1068 aa17.63■□□□□ 0.41
LETMD1-229ENST00000551261 ZBTB38Q8NAP3 1195 aaPredicted RBP17.63■□□□□ 0.41
LETMD1-229ENST00000551261 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
LETMD1-229ENST00000551261 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
LETMD1-229ENST00000551261 NOP58Q9Y2X3 529 aaKnown RBP17.63■□□□□ 0.41
LETMD1-229ENST00000551261 RTCBQ9Y3I0 505 aaKnown RBP17.63■□□□□ 0.41
LETMD1-229ENST00000551261 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
LETMD1-229ENST00000551261 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
LETMD1-229ENST00000551261 CAMTA2O94983 1202 aa17.62■□□□□ 0.41
LETMD1-229ENST00000551261 ANKRD45Q5TZF3 282 aa17.62■□□□□ 0.41
LETMD1-229ENST00000551261 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms