RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TFCP2L1Q9NZI6 479 aa17.3■□□□□ 0.36
ERBB3-215ENST00000550828 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
ERBB3-215ENST00000550828 TBC1D2BQ9UPU7 963 aa17.3■□□□□ 0.36
ERBB3-215ENST00000550828 CAMTA2O94983 1202 aa17.29■□□□□ 0.36
ERBB3-215ENST00000550828 AIMP1Q12904 312 aaKnown RBP17.29■□□□□ 0.36
ERBB3-215ENST00000550828 ZNF784Q8NCA9 323 aaPredicted RBP17.29■□□□□ 0.36
ERBB3-215ENST00000550828 BCL2L12Q9HB09 334 aa17.29■□□□□ 0.36
ERBB3-215ENST00000550828 ADRA2BP18089 450 aa17.28■□□□□ 0.36
ERBB3-215ENST00000550828 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
ERBB3-215ENST00000550828 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
ERBB3-215ENST00000550828 MAP3K15Q6ZN16 1313 aa17.27■□□□□ 0.36
ERBB3-215ENST00000550828 USP42Q9H9J4 1324 aaKnown RBP17.27■□□□□ 0.36
ERBB3-215ENST00000550828 HLFQ16534 295 aa17.27■□□□□ 0.36
ERBB3-215ENST00000550828 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
ERBB3-215ENST00000550828 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
ERBB3-215ENST00000550828 F6X3S4 739 aa17.26■□□□□ 0.35
ERBB3-215ENST00000550828 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
ERBB3-215ENST00000550828 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
ERBB3-215ENST00000550828 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
ERBB3-215ENST00000550828 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 A0A087WZG4 1122 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 PI4KAP2A4QPH2 592 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 PLIN1O60240 522 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 ZBTB7AO95365 584 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 GYS1P13807 737 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 PTGER2P43116 358 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
ERBB3-215ENST00000550828 USPL1Q5W0Q7 1092 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 PI4KAP1Q8N8J0 262 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
ERBB3-215ENST00000550828 PTPRCP08575 1304 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 TRIM27P14373 513 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 RFC4P35249 363 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 ANKRD13DQ6ZTN6 518 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
ERBB3-215ENST00000550828 ARXQ96QS3 562 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
ERBB3-215ENST00000550828 ATP10DQ9P241 1426 aa17.22■□□□□ 0.35
ERBB3-215ENST00000550828 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
ERBB3-215ENST00000550828 RLBP1P12271 317 aa17.22■□□□□ 0.35
ERBB3-215ENST00000550828 FKBP8Q14318 412 aa17.22■□□□□ 0.35
ERBB3-215ENST00000550828 FLAD1Q8NFF5 587 aa17.22■□□□□ 0.35
ERBB3-215ENST00000550828 PXDNLA1KZ92 1463 aa17.22■□□□□ 0.35
ERBB3-215ENST00000550828 ABCC4O15439 1325 aa17.21■□□□□ 0.35
ERBB3-215ENST00000550828 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
ERBB3-215ENST00000550828 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
ERBB3-215ENST00000550828 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
ERBB3-215ENST00000550828 FHDC1Q9C0D6 1143 aaPredicted RBP17.21■□□□□ 0.35
ERBB3-215ENST00000550828 MTFR1LQ9H019 292 aa17.21■□□□□ 0.35
ERBB3-215ENST00000550828 LAMB2P55268 1798 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 MSH5O43196 834 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 RRP1P56182 461 aaKnown RBP17.2■□□□□ 0.34
ERBB3-215ENST00000550828 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 RIC3Q7Z5B4 369 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 DNAAF4Q8WXU2 420 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
ERBB3-215ENST00000550828 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
ERBB3-215ENST00000550828 DDX60Q8IY21 1712 aaKnown RBP17.2■□□□□ 0.34
ERBB3-215ENST00000550828 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
ERBB3-215ENST00000550828 ZPR1O75312 459 aa17.19■□□□□ 0.34
ERBB3-215ENST00000550828 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
ERBB3-215ENST00000550828 IGKV5-2P06315 115 aa17.19■□□□□ 0.34
ERBB3-215ENST00000550828 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
ERBB3-215ENST00000550828 MYD88Q99836 296 aa17.19■□□□□ 0.34
ERBB3-215ENST00000550828 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
ERBB3-215ENST00000550828 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
ERBB3-215ENST00000550828 ATP5J2-PTCD1G3V325 749 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 RGL2O15211 777 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 GPTP24298 496 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 NFIXQ14938 502 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 BEND3Q5T5X7 828 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 NPM2Q86SE8 214 aaKnown RBP17.18■□□□□ 0.34
ERBB3-215ENST00000550828 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
ERBB3-215ENST00000550828 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
ERBB3-215ENST00000550828 MYH3P11055 1940 aa17.17■□□□□ 0.34
ERBB3-215ENST00000550828 TNRC6CQ9HCJ0 1690 aaKnown RBP17.17■□□□□ 0.34
ERBB3-215ENST00000550828 DDR1Q08345 913 aa17.17■□□□□ 0.34
ERBB3-215ENST00000550828 CWF19L2Q2TBE0 894 aaKnown RBP17.17■□□□□ 0.34
ERBB3-215ENST00000550828 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
ERBB3-215ENST00000550828 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
ERBB3-215ENST00000550828 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
ERBB3-215ENST00000550828 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
ERBB3-215ENST00000550828 TM4SF1P30408 202 aa17.16■□□□□ 0.34
ERBB3-215ENST00000550828 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
ERBB3-215ENST00000550828 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
ERBB3-215ENST00000550828 KIF13BQ9NQT8 1826 aa17.16■□□□□ 0.34
ERBB3-215ENST00000550828 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
ERBB3-215ENST00000550828 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
ERBB3-215ENST00000550828 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms