RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 JARID2Q92833 1246 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
CALCOCO1-218ENST00000550804 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
CALCOCO1-218ENST00000550804 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
CALCOCO1-218ENST00000550804 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
CALCOCO1-218ENST00000550804 ABCA3Q99758 1704 aa17.25■□□□□ 0.35
CALCOCO1-218ENST00000550804 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
CALCOCO1-218ENST00000550804 KLHDC4Q8TBB5 520 aa17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 MRE11P49959 708 aa17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
CALCOCO1-218ENST00000550804 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 LMBRD1Q9NUN5 540 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 MCCP23508 829 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 AK9Q5TCS8 1911 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 AOX1Q06278 1338 aa17.23■□□□□ 0.35
CALCOCO1-218ENST00000550804 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 SGSM2O43147 1006 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 DTNBO60941 627 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 MTX1Q13505 466 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 RRAGDQ9NQL2 400 aaPredicted RBP17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 SCN11AQ9UI33 1791 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 GRM8O00222 908 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 HSPA4P34932 840 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 LARP1Q6PKG0 1096 aaKnown RBP17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 CLASRPQ8N2M8 674 aaKnown RBP17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 LINS1Q8NG48 757 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 SIL1Q9H173 461 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
CALCOCO1-218ENST00000550804 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
CALCOCO1-218ENST00000550804 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
CALCOCO1-218ENST00000550804 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
CALCOCO1-218ENST00000550804 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
CALCOCO1-218ENST00000550804 SASH1O94885 1247 aa17.21■□□□□ 0.34
CALCOCO1-218ENST00000550804 CPA1P15085 419 aa17.21■□□□□ 0.34
CALCOCO1-218ENST00000550804 ANAPC15P60006 121 aa17.21■□□□□ 0.34
CALCOCO1-218ENST00000550804 CNTROBQ8N137 903 aa17.21■□□□□ 0.34
CALCOCO1-218ENST00000550804 ROBO1Q9Y6N7 1651 aa17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 EVA1CP58658 441 aa17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 AACSQ86V21 672 aa17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 LSG1Q9H089 658 aaKnown RBP17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 CCDC8Q9H0W5 538 aaPredicted RBP17.2■□□□□ 0.34
CALCOCO1-218ENST00000550804 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-218ENST00000550804 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-218ENST00000550804 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
CALCOCO1-218ENST00000550804 TLR7Q9NYK1 1049 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-218ENST00000550804 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
CALCOCO1-218ENST00000550804 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
CALCOCO1-218ENST00000550804 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 PTH1RQ03431 593 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 CUL4AQ13619 759 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 FAM43AQ8N2R8 423 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 GPT2Q8TD30 523 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 DDX54Q8TDD1 881 aaKnown RBP17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 IL2RBP14784 551 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 MYD88Q99836 296 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 RBM27Q9P2N5 1060 aaKnown RBP17.18■□□□□ 0.34
CALCOCO1-218ENST00000550804 DDX58O95786 925 aaKnown RBP17.17■□□□□ 0.34
CALCOCO1-218ENST00000550804 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
CALCOCO1-218ENST00000550804 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
CALCOCO1-218ENST00000550804 RAD50Q92878 1312 aa17.17■□□□□ 0.34
CALCOCO1-218ENST00000550804 PTMSP20962 102 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 MCM2P49736 904 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 MRC1P22897 1456 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 AHDC1Q5TGY3 1603 aaPredicted RBP17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 ATP5J2-PTCD1G3V325 749 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 CABP4P57796 275 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 G3BP1Q13283 466 aaKnown RBP eCLIP17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 GCKRQ14397 625 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
CALCOCO1-218ENST00000550804 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 UTYO14607 1347 aa17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 BRD1O95696 1058 aa17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
CALCOCO1-218ENST00000550804 KIAA1211Q6ZU35 1233 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms