RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 SRGNP10124 158 aa27.48■■□□□ 1.99
CACNB3-218ENST00000550771 TAF7Q15545 349 aaPredicted RBP27.48■■□□□ 1.99
CACNB3-218ENST00000550771 BCORQ6W2J9 1755 aa27.48■■□□□ 1.99
CACNB3-218ENST00000550771 LTBP3Q9NS15 1303 aa27.47■■□□□ 1.99
CACNB3-218ENST00000550771 MASTLQ96GX5 879 aa27.47■■□□□ 1.99
CACNB3-218ENST00000550771 WDR90Q96KV7 1748 aa27.47■■□□□ 1.99
CACNB3-218ENST00000550771 NBPF26B4DH59 902 aa27.46■■□□□ 1.99
CACNB3-218ENST00000550771 SOGA3Q5TF21 947 aa27.46■■□□□ 1.99
CACNB3-218ENST00000550771 DPY19L2Q6NUT2 758 aa27.46■■□□□ 1.99
CACNB3-218ENST00000550771 NBPF10Q6P3W6 841 aaKnown RBP27.46■■□□□ 1.99
CACNB3-218ENST00000550771 NBPF5PQ86XG9 351 aaPredicted RBP27.46■■□□□ 1.99
CACNB3-218ENST00000550771 NBPF15Q8N660 670 aa27.46■■□□□ 1.99
CACNB3-218ENST00000550771 KLRG1Q96E93 195 aa27.46■■□□□ 1.99
CACNB3-218ENST00000550771 COL11A2P13942 1736 aaPredicted RBP27.46■■□□□ 1.99
CACNB3-218ENST00000550771 NEFMP07197 916 aa27.45■■□□□ 1.98
CACNB3-218ENST00000550771 ERFEQ4G0M1 354 aa27.45■■□□□ 1.98
CACNB3-218ENST00000550771 TAOK3Q9H2K8 898 aa27.45■■□□□ 1.98
CACNB3-218ENST00000550771 ZNF219Q9P2Y4 722 aaPredicted RBP27.45■■□□□ 1.98
CACNB3-218ENST00000550771 HTRA3P83110 453 aa27.44■■□□□ 1.98
CACNB3-218ENST00000550771 PRPF40BQ6NWY9 871 aaKnown RBP27.44■■□□□ 1.98
CACNB3-218ENST00000550771 TIAM2Q8IVF5 1701 aa27.43■■□□□ 1.98
CACNB3-218ENST00000550771 TPTE2Q6XPS3 522 aa27.42■■□□□ 1.98
CACNB3-218ENST00000550771 PNISRQ8TF01 805 aaKnown RBP27.42■■□□□ 1.98
CACNB3-218ENST00000550771 FER1L6Q2WGJ9 1857 aa27.41■■□□□ 1.98
CACNB3-218ENST00000550771 KLRG2A4D1S0 409 aaPredicted RBP27.41■■□□□ 1.98
CACNB3-218ENST00000550771 JMYQ8N9B5 988 aa27.41■■□□□ 1.98
CACNB3-218ENST00000550771 NIP7Q9Y221 180 aaKnown RBP eCLIP27.41■■□□□ 1.98
CACNB3-218ENST00000550771 POTECB2RU33 542 aa27.4■■□□□ 1.98
CACNB3-218ENST00000550771 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
CACNB3-218ENST00000550771 CCDC88AQ3V6T2 1871 aa27.4■■□□□ 1.98
CACNB3-218ENST00000550771 NPR1P16066 1061 aa27.39■■□□□ 1.98
CACNB3-218ENST00000550771 PLEKHF1Q96S99 279 aa27.39■■□□□ 1.98
CACNB3-218ENST00000550771 C7orf43Q8WVR3 580 aa27.38■■□□□ 1.97
CACNB3-218ENST00000550771 SLX4Q8IY92 1834 aa27.38■■□□□ 1.97
CACNB3-218ENST00000550771 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
CACNB3-218ENST00000550771 NFE2L2Q16236 605 aa27.35■■□□□ 1.97
CACNB3-218ENST00000550771 HLFQ16534 295 aa27.35■■□□□ 1.97
CACNB3-218ENST00000550771 CCDC93Q567U6 631 aa27.35■■□□□ 1.97
CACNB3-218ENST00000550771 DICER1Q9UPY3 1922 aaKnown RBP27.35■■□□□ 1.97
CACNB3-218ENST00000550771 ARFGEF2Q9Y6D5 1785 aa27.35■■□□□ 1.97
CACNB3-218ENST00000550771 ERVV-1B6SEH8 477 aa27.33■■□□□ 1.97
CACNB3-218ENST00000550771 EIF4A1P60842 406 aaKnown RBP27.33■■□□□ 1.97
CACNB3-218ENST00000550771 LAMB4A4D0S4 1761 aa27.31■■□□□ 1.96
CACNB3-218ENST00000550771 DDNO94850 711 aaPredicted RBP27.31■■□□□ 1.96
CACNB3-218ENST00000550771 FAM177BA6PVY3 158 aa27.3■■□□□ 1.96
CACNB3-218ENST00000550771 GTF2E1P29083 439 aaPredicted RBP27.3■■□□□ 1.96
CACNB3-218ENST00000550771 ALDH1B1P30837 517 aa27.3■■□□□ 1.96
CACNB3-218ENST00000550771 FKBP4Q02790 459 aaKnown RBP eCLIP27.3■■□□□ 1.96
CACNB3-218ENST00000550771 NYXQ9GZU5 481 aa27.3■■□□□ 1.96
CACNB3-218ENST00000550771 MAPK8IP3Q9UPT6 1336 aa27.3■■□□□ 1.96
CACNB3-218ENST00000550771 KDM3BQ7LBC6 1761 aa27.3■■□□□ 1.96
CACNB3-218ENST00000550771 RTKN2Q8IZC4 609 aa27.29■■□□□ 1.96
CACNB3-218ENST00000550771 THUMPD2Q9BTF0 503 aaKnown RBP27.29■■□□□ 1.96
CACNB3-218ENST00000550771 MAP3K15Q6ZN16 1313 aa27.29■■□□□ 1.96
CACNB3-218ENST00000550771 KIF6Q6ZMV9 814 aa27.28■■□□□ 1.96
CACNB3-218ENST00000550771 NGEFQ8N5V2 710 aa27.28■■□□□ 1.96
CACNB3-218ENST00000550771 DLG5Q8TDM6 1919 aa27.28■■□□□ 1.96
CACNB3-218ENST00000550771 L3MBTL3Q96JM7 780 aaPredicted RBP27.27■■□□□ 1.96
CACNB3-218ENST00000550771 RRP7AQ9Y3A4 280 aaKnown RBP27.27■■□□□ 1.96
CACNB3-218ENST00000550771 CACNA1SQ13698 1873 aa27.27■■□□□ 1.96
CACNB3-218ENST00000550771 IQCA1LA6NCM1 817 aa27.26■■□□□ 1.95
CACNB3-218ENST00000550771 CRY2Q49AN0 593 aa27.26■■□□□ 1.95
CACNB3-218ENST00000550771 CHADLQ6NUI6 762 aa27.26■■□□□ 1.95
CACNB3-218ENST00000550771 ERBB4Q15303 1308 aa27.25■■□□□ 1.95
CACNB3-218ENST00000550771 TTLL7Q6ZT98 887 aa27.25■■□□□ 1.95
CACNB3-218ENST00000550771 ZNF277Q9NRM2 450 aaPredicted RBP27.25■■□□□ 1.95
CACNB3-218ENST00000550771 IBTKQ9P2D0 1353 aaPredicted RBP27.24■■□□□ 1.95
CACNB3-218ENST00000550771 ABCC12Q96J65 1359 aa27.23■■□□□ 1.95
CACNB3-218ENST00000550771 MYL6BP14649 208 aa27.23■■□□□ 1.95
CACNB3-218ENST00000550771 OLFM4Q6UX06 510 aa27.23■■□□□ 1.95
CACNB3-218ENST00000550771 NUTM1Q86Y26 1132 aa27.23■■□□□ 1.95
CACNB3-218ENST00000550771 RALBP1Q15311 655 aa27.22■■□□□ 1.95
CACNB3-218ENST00000550771 POTEIP0CG38 1075 aa27.21■■□□□ 1.95
CACNB3-218ENST00000550771 POTEJP0CG39 1038 aa27.21■■□□□ 1.95
CACNB3-218ENST00000550771 CC2D2BQ6DHV5 1058 aa27.21■■□□□ 1.95
CACNB3-218ENST00000550771 TAF1DQ9H5J8 278 aaPredicted RBP27.21■■□□□ 1.95
CACNB3-218ENST00000550771 TSPYL4Q9UJ04 414 aa27.21■■□□□ 1.95
CACNB3-218ENST00000550771 RIC1Q4ADV7 1423 aa27.21■■□□□ 1.95
CACNB3-218ENST00000550771 UBN2Q6ZU65 1347 aa27.2■■□□□ 1.95
CACNB3-218ENST00000550771 HOXA10P31260 410 aaPredicted RBP27.2■■□□□ 1.94
CACNB3-218ENST00000550771 IARSP41252 1262 aaKnown RBP27.2■■□□□ 1.94
CACNB3-218ENST00000550771 LDHDQ86WU2 507 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 ZNF34Q8IZ26 560 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 SYNE4Q8N205 404 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 PSMD1Q99460 953 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 ZBTB3Q9H5J0 574 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 CREBZFQ9NS37 354 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 BABAM1Q9NWV8 329 aa27.2■■□□□ 1.94
CACNB3-218ENST00000550771 SNED1Q8TER0 1413 aa27.19■■□□□ 1.94
CACNB3-218ENST00000550771 GPTP24298 496 aa27.19■■□□□ 1.94
CACNB3-218ENST00000550771 GIGYF2Q6Y7W6 1299 aaKnown RBP27.19■■□□□ 1.94
CACNB3-218ENST00000550771 ZNF541Q9H0D2 1346 aa27.18■■□□□ 1.94
CACNB3-218ENST00000550771 FZD9O00144 591 aa27.18■■□□□ 1.94
CACNB3-218ENST00000550771 RIPK4P57078 832 aa27.18■■□□□ 1.94
CACNB3-218ENST00000550771 SUSD4Q5VX71 490 aa27.18■■□□□ 1.94
CACNB3-218ENST00000550771 RPGRQ92834 1020 aaKnown RBP27.18■■□□□ 1.94
CACNB3-218ENST00000550771 GRIPAP1Q4V328 841 aa27.17■■□□□ 1.94
CACNB3-218ENST00000550771 NUP98P52948 1817 aa27.17■■□□□ 1.94
CACNB3-218ENST00000550771 SCN4AP35499 1836 aa27.16■■□□□ 1.94
CACNB3-218ENST00000550771 LMOD3Q0VAK6 560 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms