RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CNKSR1Q969H4 720 aa28.88■■■□□ 2.21
SMARCC2-210ENST00000550519 ZNF219Q9P2Y4 722 aaPredicted RBP28.88■■■□□ 2.21
SMARCC2-210ENST00000550519 COL11A2P13942 1736 aaPredicted RBP28.88■■■□□ 2.21
SMARCC2-210ENST00000550519 WDR90Q96KV7 1748 aa28.88■■■□□ 2.21
SMARCC2-210ENST00000550519 BCORQ6W2J9 1755 aa28.88■■■□□ 2.21
SMARCC2-210ENST00000550519 NBPF26B4DH59 902 aa28.87■■■□□ 2.21
SMARCC2-210ENST00000550519 NBPF10Q6P3W6 841 aaKnown RBP28.87■■■□□ 2.21
SMARCC2-210ENST00000550519 NBPF15Q8N660 670 aa28.87■■■□□ 2.21
SMARCC2-210ENST00000550519 RGL2O15211 777 aa28.86■■■□□ 2.21
SMARCC2-210ENST00000550519 MASTLQ96GX5 879 aa28.86■■■□□ 2.21
SMARCC2-210ENST00000550519 ZNF652Q9Y2D9 606 aa28.86■■■□□ 2.21
SMARCC2-210ENST00000550519 LTBP3Q9NS15 1303 aa28.86■■■□□ 2.21
SMARCC2-210ENST00000550519 NBPF5PQ86XG9 351 aaPredicted RBP28.85■■■□□ 2.21
SMARCC2-210ENST00000550519 KLRG1Q96E93 195 aa28.85■■■□□ 2.21
SMARCC2-210ENST00000550519 POTECB2RU33 542 aa28.84■■■□□ 2.21
SMARCC2-210ENST00000550519 PRPF40BQ6NWY9 871 aaKnown RBP28.84■■■□□ 2.21
SMARCC2-210ENST00000550519 TIAM2Q8IVF5 1701 aa28.83■■■□□ 2.21
SMARCC2-210ENST00000550519 ERFEQ4G0M1 354 aa28.83■■■□□ 2.21
SMARCC2-210ENST00000550519 DPY19L2Q6NUT2 758 aa28.83■■■□□ 2.21
SMARCC2-210ENST00000550519 TAOK3Q9H2K8 898 aa28.82■■■□□ 2.2
SMARCC2-210ENST00000550519 MIS18AQ9NYP9 233 aa28.82■■■□□ 2.2
SMARCC2-210ENST00000550519 FER1L6Q2WGJ9 1857 aa28.82■■■□□ 2.2
SMARCC2-210ENST00000550519 CCDC88AQ3V6T2 1871 aa28.82■■■□□ 2.2
SMARCC2-210ENST00000550519 KLRG2A4D1S0 409 aaPredicted RBP28.81■■■□□ 2.2
SMARCC2-210ENST00000550519 SOGA3Q5TF21 947 aa28.81■■■□□ 2.2
SMARCC2-210ENST00000550519 JMYQ8N9B5 988 aa28.81■■■□□ 2.2
SMARCC2-210ENST00000550519 C7orf43Q8WVR3 580 aa28.8■■■□□ 2.2
SMARCC2-210ENST00000550519 PLEKHF1Q96S99 279 aa28.8■■■□□ 2.2
SMARCC2-210ENST00000550519 NIP7Q9Y221 180 aaKnown RBP eCLIP28.8■■■□□ 2.2
SMARCC2-210ENST00000550519 SLX4Q8IY92 1834 aa28.8■■■□□ 2.2
SMARCC2-210ENST00000550519 NEFMP07197 916 aa28.79■■■□□ 2.2
SMARCC2-210ENST00000550519 TPTE2Q6XPS3 522 aa28.79■■■□□ 2.2
SMARCC2-210ENST00000550519 PNISRQ8TF01 805 aaKnown RBP28.78■■■□□ 2.2
SMARCC2-210ENST00000550519 NPR1P16066 1061 aa28.77■■■□□ 2.2
SMARCC2-210ENST00000550519 HLFQ16534 295 aa28.77■■■□□ 2.2
SMARCC2-210ENST00000550519 DICER1Q9UPY3 1922 aaKnown RBP28.75■■■□□ 2.19
SMARCC2-210ENST00000550519 NFE2L2Q16236 605 aa28.74■■■□□ 2.19
SMARCC2-210ENST00000550519 ARFGEF2Q9Y6D5 1785 aa28.73■■■□□ 2.19
SMARCC2-210ENST00000550519 EIF4A1P60842 406 aaKnown RBP28.73■■■□□ 2.19
SMARCC2-210ENST00000550519 CCDC93Q567U6 631 aa28.73■■■□□ 2.19
SMARCC2-210ENST00000550519 FAM177BA6PVY3 158 aa28.71■■■□□ 2.19
SMARCC2-210ENST00000550519 ERVV-1B6SEH8 477 aa28.71■■■□□ 2.19
SMARCC2-210ENST00000550519 DDNO94850 711 aaPredicted RBP28.71■■■□□ 2.19
SMARCC2-210ENST00000550519 THUMPD2Q9BTF0 503 aaKnown RBP28.71■■■□□ 2.19
SMARCC2-210ENST00000550519 LAMB4A4D0S4 1761 aa28.7■■■□□ 2.18
SMARCC2-210ENST00000550519 PNNQ9H307 717 aaKnown RBP28.69■■■□□ 2.18
SMARCC2-210ENST00000550519 KDM3BQ7LBC6 1761 aa28.69■■■□□ 2.18
SMARCC2-210ENST00000550519 DLG5Q8TDM6 1919 aa28.69■■■□□ 2.18
SMARCC2-210ENST00000550519 CACNA1SQ13698 1873 aa28.68■■■□□ 2.18
SMARCC2-210ENST00000550519 FKBP4Q02790 459 aaKnown RBP eCLIP28.68■■■□□ 2.18
SMARCC2-210ENST00000550519 NGEFQ8N5V2 710 aa28.68■■■□□ 2.18
SMARCC2-210ENST00000550519 MAP3K15Q6ZN16 1313 aa28.68■■■□□ 2.18
SMARCC2-210ENST00000550519 GTF2E1P29083 439 aaPredicted RBP28.67■■■□□ 2.18
SMARCC2-210ENST00000550519 RRP7AQ9Y3A4 280 aaKnown RBP28.67■■■□□ 2.18
SMARCC2-210ENST00000550519 ALDH1B1P30837 517 aa28.66■■■□□ 2.18
SMARCC2-210ENST00000550519 OLFM4Q6UX06 510 aa28.66■■■□□ 2.18
SMARCC2-210ENST00000550519 TTLL7Q6ZT98 887 aa28.66■■■□□ 2.18
SMARCC2-210ENST00000550519 NYXQ9GZU5 481 aa28.66■■■□□ 2.18
SMARCC2-210ENST00000550519 MAPK8IP3Q9UPT6 1336 aa28.66■■■□□ 2.18
SMARCC2-210ENST00000550519 CRY2Q49AN0 593 aa28.65■■■□□ 2.18
SMARCC2-210ENST00000550519 CHADLQ6NUI6 762 aa28.65■■■□□ 2.18
SMARCC2-210ENST00000550519 RTKN2Q8IZC4 609 aa28.65■■■□□ 2.18
SMARCC2-210ENST00000550519 L3MBTL3Q96JM7 780 aaPredicted RBP28.65■■■□□ 2.18
SMARCC2-210ENST00000550519 ZNF277Q9NRM2 450 aaPredicted RBP28.64■■■□□ 2.18
SMARCC2-210ENST00000550519 ABCC12Q96J65 1359 aa28.63■■■□□ 2.17
SMARCC2-210ENST00000550519 POTEIP0CG38 1075 aa28.63■■■□□ 2.17
SMARCC2-210ENST00000550519 POTEJP0CG39 1038 aa28.63■■■□□ 2.17
SMARCC2-210ENST00000550519 MYL6BP14649 208 aa28.63■■■□□ 2.17
SMARCC2-210ENST00000550519 KIF6Q6ZMV9 814 aa28.63■■■□□ 2.17
SMARCC2-210ENST00000550519 NUTM1Q86Y26 1132 aa28.63■■■□□ 2.17
SMARCC2-210ENST00000550519 IQCA1LA6NCM1 817 aa28.62■■■□□ 2.17
SMARCC2-210ENST00000550519 ERBB4Q15303 1308 aa28.62■■■□□ 2.17
SMARCC2-210ENST00000550519 UBN2Q6ZU65 1347 aa28.61■■■□□ 2.17
SMARCC2-210ENST00000550519 ZBTB3Q9H5J0 574 aa28.6■■■□□ 2.17
SMARCC2-210ENST00000550519 PCNTO95613 3336 aa28.6■■■□□ 2.17
SMARCC2-210ENST00000550519 IBTKQ9P2D0 1353 aaPredicted RBP28.6■■■□□ 2.17
SMARCC2-210ENST00000550519 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
SMARCC2-210ENST00000550519 ZNF34Q8IZ26 560 aa28.59■■■□□ 2.17
SMARCC2-210ENST00000550519 TAF1DQ9H5J8 278 aaPredicted RBP28.59■■■□□ 2.17
SMARCC2-210ENST00000550519 TSPYL4Q9UJ04 414 aa28.59■■■□□ 2.17
SMARCC2-210ENST00000550519 ZNF541Q9H0D2 1346 aa28.59■■■□□ 2.17
SMARCC2-210ENST00000550519 RIC1Q4ADV7 1423 aa28.59■■■□□ 2.17
SMARCC2-210ENST00000550519 GPTP24298 496 aa28.58■■■□□ 2.17
SMARCC2-210ENST00000550519 HOXA10P31260 410 aaPredicted RBP28.58■■■□□ 2.17
SMARCC2-210ENST00000550519 COL13A1Q5TAT6 717 aaPredicted RBP28.58■■■□□ 2.17
SMARCC2-210ENST00000550519 SUSD4Q5VX71 490 aa28.58■■■□□ 2.17
SMARCC2-210ENST00000550519 GIGYF2Q6Y7W6 1299 aaKnown RBP28.58■■■□□ 2.17
SMARCC2-210ENST00000550519 SYNE4Q8N205 404 aa28.58■■■□□ 2.17
SMARCC2-210ENST00000550519 NUP98P52948 1817 aa28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 IARSP41252 1262 aaKnown RBP28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 RIPK4P57078 832 aa28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 RALBP1Q15311 655 aa28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 LRP10Q7Z4F1 713 aa28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 PSMD1Q99460 953 aa28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 CREBZFQ9NS37 354 aa28.57■■■□□ 2.16
SMARCC2-210ENST00000550519 FZD9O00144 591 aa28.56■■■□□ 2.16
SMARCC2-210ENST00000550519 CC2D2BQ6DHV5 1058 aa28.56■■■□□ 2.16
SMARCC2-210ENST00000550519 LDHDQ86WU2 507 aa28.56■■■□□ 2.16
SMARCC2-210ENST00000550519 NTSR2O95665 410 aa28.55■■■□□ 2.16
SMARCC2-210ENST00000550519 PDIA6Q15084 440 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms