RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 PLVAPQ9BX97 442 aa6.25□□□□□ -1.41
CCNT1-203ENST00000550457 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
CCNT1-203ENST00000550457 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
CCNT1-203ENST00000550457 SFSWAPQ12872 951 aaKnown RBP6.24□□□□□ -1.41
CCNT1-203ENST00000550457 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
CCNT1-203ENST00000550457 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
CCNT1-203ENST00000550457 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
CCNT1-203ENST00000550457 SLC30A3Q99726 388 aa6.24□□□□□ -1.41
CCNT1-203ENST00000550457 ZNF232Q9UNY5 417 aa6.24□□□□□ -1.41
CCNT1-203ENST00000550457 SERTM1A2A2V5 107 aa6.23□□□□□ -1.41
CCNT1-203ENST00000550457 PRKCSHP14314 528 aaPredicted RBP6.23□□□□□ -1.41
CCNT1-203ENST00000550457 CLDN10P78369 228 aa6.23□□□□□ -1.41
CCNT1-203ENST00000550457 COL9A3Q14050 684 aaPredicted RBP6.23□□□□□ -1.41
CCNT1-203ENST00000550457 TPCN2Q8NHX9 752 aa6.23□□□□□ -1.41
CCNT1-203ENST00000550457 STARD13Q9Y3M8 1113 aa6.23□□□□□ -1.41
CCNT1-203ENST00000550457 USP17L3A6NCW0 530 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 USP17L4A6NCW7 530 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 SIN3BO75182 1162 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 DOC2BQ14184 412 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 USP17L2Q6R6M4 530 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 USP17L1Q7RTZ2 530 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 PLEKHM2Q8IWE5 1019 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 Q8N3U1 123 aa6.22□□□□□ -1.41
CCNT1-203ENST00000550457 TSPAN10Q9H1Z9 355 aaPredicted RBP6.22□□□□□ -1.41
CCNT1-203ENST00000550457 ADARB2-AS1A8MUL3 147 aa6.21□□□□□ -1.42
CCNT1-203ENST00000550457 CCDC102BQ68D86 513 aa6.21□□□□□ -1.42
CCNT1-203ENST00000550457 POTEAQ6S8J7 498 aa6.21□□□□□ -1.42
CCNT1-203ENST00000550457 TRIM50Q86XT4 487 aa6.21□□□□□ -1.42
CCNT1-203ENST00000550457 RHPN1Q8TCX5 695 aa6.21□□□□□ -1.42
CCNT1-203ENST00000550457 HSH2DQ96JZ2 352 aa6.21□□□□□ -1.42
CCNT1-203ENST00000550457 GPC6Q9Y625 555 aaPredicted RBP6.21□□□□□ -1.42
CCNT1-203ENST00000550457 SPATA31C1P0DKV0 1188 aa6.2□□□□□ -1.42
CCNT1-203ENST00000550457 SPEM2Q0P670 501 aa6.2□□□□□ -1.42
CCNT1-203ENST00000550457 C8orf86Q6ZUL3 223 aa6.2□□□□□ -1.42
CCNT1-203ENST00000550457 RAB44Q7Z6P3 723 aaPredicted RBP6.2□□□□□ -1.42
CCNT1-203ENST00000550457 HCN4Q9Y3Q4 1203 aa6.2□□□□□ -1.42
CCNT1-203ENST00000550457 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 M0R082 166 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 DKK1O94907 266 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 ALBP02768 609 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 ALAS2P22557 587 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 HIRAP54198 1017 aaPredicted RBP6.19□□□□□ -1.42
CCNT1-203ENST00000550457 PSMA6P60900 246 aaKnown RBP6.19□□□□□ -1.42
CCNT1-203ENST00000550457 HDGFL1Q5TGJ6 251 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 C1orf53Q5VUE5 145 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 WWC1Q8IX03 1113 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 TSEN2Q8NCE0 465 aaKnown RBP6.19□□□□□ -1.42
CCNT1-203ENST00000550457 ZNF280CQ8ND82 737 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 ZNF417Q8TAU3 575 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 TNFRSF25Q93038 417 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
CCNT1-203ENST00000550457 PHACTR1Q9C0D0 580 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 SEMA6BQ9H3T3 888 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 NEUROD4Q9HD90 331 aa6.19□□□□□ -1.42
CCNT1-203ENST00000550457 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
CCNT1-203ENST00000550457 C21orf2O43822 256 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 ATP9BO43861 1147 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 RAD21O60216 631 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 GATA4P43694 442 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 ATP1A2P50993 1020 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 MICALL1Q8N3F8 863 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 OGFOD1Q8N543 542 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 CEP63Q96MT8 703 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 PSMG3-AS1Q96PY0 264 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
CCNT1-203ENST00000550457 SFI1A8K8P3 1242 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 M0R2N6 131 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 ADH7P40394 386 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 KCNQ4P56696 695 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 TYRO3Q06418 890 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 C20orf204Q6ZNR8 217 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 LARGE2Q8N3Y3 721 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 SUSD3Q96L08 255 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 BRD7Q9NPI1 651 aa6.17□□□□□ -1.42
CCNT1-203ENST00000550457 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
CCNT1-203ENST00000550457 PALM3A6NDB9 673 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-203ENST00000550457 PPP1R12BO60237 982 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-203ENST00000550457 NID1P14543 1247 aa6.16□□□□□ -1.42
CCNT1-203ENST00000550457 UBTFP17480 764 aaKnown RBP6.16□□□□□ -1.42
CCNT1-203ENST00000550457 RSPO4Q2I0M5 234 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-203ENST00000550457 SIX5Q8N196 739 aa6.16□□□□□ -1.42
CCNT1-203ENST00000550457 ZNF594Q96JF6 807 aaPredicted RBP6.16□□□□□ -1.42
CCNT1-203ENST00000550457 KCNH4Q9UQ05 1017 aa6.16□□□□□ -1.42
CCNT1-203ENST00000550457 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.42
CCNT1-203ENST00000550457 PRRT3Q5FWE3 981 aa6.15□□□□□ -1.42
CCNT1-203ENST00000550457 NKAPLQ5M9Q1 402 aa6.15□□□□□ -1.42
CCNT1-203ENST00000550457 TPSG1Q9NRR2 321 aa6.15□□□□□ -1.42
CCNT1-203ENST00000550457 ANKIB1Q9P2G1 1089 aa6.15□□□□□ -1.42
CCNT1-203ENST00000550457 SPDYE3A6NKU9 549 aa6.14□□□□□ -1.43
CCNT1-203ENST00000550457 FLIIQ13045 1269 aa6.14□□□□□ -1.43
CCNT1-203ENST00000550457 FOXD4L6Q3SYB3 417 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-203ENST00000550457 FOXD4L3Q6VB84 417 aaPredicted RBP6.14□□□□□ -1.43
CCNT1-203ENST00000550457 ALDH16A1Q8IZ83 802 aa6.14□□□□□ -1.43
CCNT1-203ENST00000550457 APBA3O96018 575 aa6.13□□□□□ -1.43
CCNT1-203ENST00000550457 GRIK4Q16099 956 aa6.13□□□□□ -1.43
CCNT1-203ENST00000550457 BTLAQ7Z6A9 289 aa6.13□□□□□ -1.43
CCNT1-203ENST00000550457 BHMTQ93088 406 aa6.13□□□□□ -1.43
CCNT1-203ENST00000550457 C2orf49Q9BVC5 232 aaPredicted RBP6.13□□□□□ -1.43
CCNT1-203ENST00000550457 CHMP3Q9Y3E7 222 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms