RNA–Protein interactions for RNA: ENST00000550018.5

PPFIA2-218, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-218ENST00000550018 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
PPFIA2-218ENST00000550018 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
PPFIA2-218ENST00000550018 CNTNAP1P78357 1384 aa13.2□□□□□ -0.3
PPFIA2-218ENST00000550018 PASKQ96RG2 1323 aa13.2□□□□□ -0.3
PPFIA2-218ENST00000550018 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
PPFIA2-218ENST00000550018 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
PPFIA2-218ENST00000550018 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
PPFIA2-218ENST00000550018 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
PPFIA2-218ENST00000550018 NUP98P52948 1817 aa13.19□□□□□ -0.3
PPFIA2-218ENST00000550018 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-218ENST00000550018 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
PPFIA2-218ENST00000550018 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
PPFIA2-218ENST00000550018 LTBP3Q9NS15 1303 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 ZNF790Q6PG37 636 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 C7orf43Q8WVR3 580 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 PHACTR3Q96KR7 559 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
PPFIA2-218ENST00000550018 LAMB2P55268 1798 aa13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 SRGNP10124 158 aa13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 VEGFBP49765 207 aa13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 ZNF277Q9NRM2 450 aaPredicted RBP13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
PPFIA2-218ENST00000550018 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
PPFIA2-218ENST00000550018 TAF1DQ9H5J8 278 aaPredicted RBP13.16□□□□□ -0.3
PPFIA2-218ENST00000550018 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
PPFIA2-218ENST00000550018 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 TAF1P21675 1872 aa13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
PPFIA2-218ENST00000550018 COL4A1P02462 1669 aa13.15□□□□□ -0.31
PPFIA2-218ENST00000550018 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
PPFIA2-218ENST00000550018 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
PPFIA2-218ENST00000550018 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
PPFIA2-218ENST00000550018 PDE6BP35913 854 aa13.14□□□□□ -0.31
PPFIA2-218ENST00000550018 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
PPFIA2-218ENST00000550018 DZIP3Q86Y13 1208 aaKnown RBP13.14□□□□□ -0.31
PPFIA2-218ENST00000550018 STARD3NLO95772 234 aa13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 HLFQ16534 295 aa13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
PPFIA2-218ENST00000550018 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 LBX1P52954 281 aa13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 MCM10Q7L590 875 aa13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
PPFIA2-218ENST00000550018 A0A087WZG4 1122 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 TEFQ10587 303 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
PPFIA2-218ENST00000550018 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
PPFIA2-218ENST00000550018 ST5P78524 1137 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 WBP1LQ9NX94 342 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 ANKRD36CQ5JPF3 1778 aa13.09□□□□□ -0.31
PPFIA2-218ENST00000550018 TNRC18O15417 2968 aaPredicted RBP13.08□□□□□ -0.31
PPFIA2-218ENST00000550018 DUOX1Q9NRD9 1551 aa13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 KLRG2A4D1S0 409 aaPredicted RBP13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 TRAF5O00463 557 aa13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 EPHX2P34913 555 aa13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
PPFIA2-218ENST00000550018 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 TMEM88BA6NKF7 163 aa13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 NPHP1O15259 732 aa13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 HACL1Q9UJ83 578 aa13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
PPFIA2-218ENST00000550018 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
PPFIA2-218ENST00000550018 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
PPFIA2-218ENST00000550018 FZD9O00144 591 aa13.06□□□□□ -0.32
PPFIA2-218ENST00000550018 NPR1P16066 1061 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms