RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 NLRP13Q86W25 1043 aa4.93□□□□□ -1.62
RAB5B-207ENST00000549915 CNKSR1Q969H4 720 aa4.93□□□□□ -1.62
RAB5B-207ENST00000549915 ZSCAN10Q96SZ4 725 aaPredicted RBP4.93□□□□□ -1.62
RAB5B-207ENST00000549915 GRIP2Q9C0E4 1043 aa4.93□□□□□ -1.62
RAB5B-207ENST00000549915 RRP7BPQ9NSQ0 103 aa4.93□□□□□ -1.62
RAB5B-207ENST00000549915 CLASP1Q7Z460 1538 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 EIF3AQ14152 1382 aaKnown RBP4.92□□□□□ -1.62
RAB5B-207ENST00000549915 PARD3Q8TEW0 1356 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 A0A1B0GTH6 734 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 BACH1O14867 736 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 SKIP12755 728 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 TMEM214Q6NUQ4 689 aaKnown RBP4.92□□□□□ -1.62
RAB5B-207ENST00000549915 CENPQQ7L2Z9 268 aaPredicted RBP4.92□□□□□ -1.62
RAB5B-207ENST00000549915 PLEKHM2Q8IWE5 1019 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 C1orf216Q8TAB5 229 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 XAGE2Q96GT9 111 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 TRERF1Q96PN7 1200 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 ADCY10Q96PN6 1610 aa4.92□□□□□ -1.62
RAB5B-207ENST00000549915 ZMYM3Q14202 1370 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 ADAMTS12P58397 1594 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 CEP170Q5SW79 1584 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 GMPRP36959 345 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 TLR1Q15399 786 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 NFKBIBQ15653 356 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 GLIPR1L2Q4G1C9 344 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 NBPF10Q6P3W6 841 aaKnown RBP4.91□□□□□ -1.62
RAB5B-207ENST00000549915 PRICKLE2Q7Z3G6 844 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 NPM2Q86SE8 214 aaKnown RBP4.91□□□□□ -1.62
RAB5B-207ENST00000549915 TRIM22Q8IYM9 498 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 ZSCAN1Q8NBB4 408 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 EXOC6Q8TAG9 804 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 RHBDD1Q8TEB9 315 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 TIMMDC1Q9NPL8 285 aa4.91□□□□□ -1.62
RAB5B-207ENST00000549915 NSFL1CQ9UNZ2 370 aaKnown RBP4.91□□□□□ -1.62
RAB5B-207ENST00000549915 LAS1LQ9Y4W2 734 aaKnown RBP4.91□□□□□ -1.62
RAB5B-207ENST00000549915 CAMSAP2Q08AD1 1489 aa4.9□□□□□ -1.62
RAB5B-207ENST00000549915 CDC14CA4D256 554 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 USP17L5A8MUK1 530 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 IL2RAP01589 272 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 F11P03951 625 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 INHAP05111 366 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 CSB-PGBD3P0DP91 1061 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 VEGFBP49765 207 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 GDF10P55107 478 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 CENPCQ03188 943 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 PGBD3Q8N328 593 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 POM121Q96HA1 1249 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 CDCA7Q9BWT1 371 aaPredicted RBP4.9□□□□□ -1.63
RAB5B-207ENST00000549915 PHF24Q9UPV7 400 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 CDK13Q14004 1512 aaKnown RBP4.9□□□□□ -1.63
RAB5B-207ENST00000549915 URB2Q14146 1524 aaKnown RBP4.9□□□□□ -1.63
RAB5B-207ENST00000549915 ERBB4Q15303 1308 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 KDM2BQ8NHM5 1336 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 EIF4G3O43432 1585 aaKnown RBP4.9□□□□□ -1.63
RAB5B-207ENST00000549915 VIRMAQ69YN4 1812 aaKnown RBP4.9□□□□□ -1.63
RAB5B-207ENST00000549915 ANKRD30AQ9BXX3 1397 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 EIF2AK4Q9P2K8 1649 aaKnown RBP4.9□□□□□ -1.63
RAB5B-207ENST00000549915 NINLQ9Y2I6 1382 aa4.9□□□□□ -1.63
RAB5B-207ENST00000549915 PTPRGP23470 1445 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 LMTK3Q96Q04 1460 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 COL17A1Q9UMD9 1497 aaPredicted RBP4.89□□□□□ -1.63
RAB5B-207ENST00000549915 ZNF608Q9ULD9 1512 aaPredicted RBP4.89□□□□□ -1.63
RAB5B-207ENST00000549915 ATP9BO43861 1147 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 PSME1Q06323 249 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 NBPF1Q3BBV0 1214 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 L1TD1Q5T7N2 865 aaKnown RBP4.89□□□□□ -1.63
RAB5B-207ENST00000549915 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.89□□□□□ -1.63
RAB5B-207ENST00000549915 NIFKQ9BYG3 293 aaKnown RBP4.89□□□□□ -1.63
RAB5B-207ENST00000549915 RAB6BQ9NRW1 208 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 HRH3Q9Y5N1 445 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 KIAA0556O60303 1618 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 RAPGEF6Q8TEU7 1601 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 PBRM1Q86U86 1689 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 GPRASP1Q5JY77 1395 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 NUP160Q12769 1436 aa4.89□□□□□ -1.63
RAB5B-207ENST00000549915 TROQ12816 1431 aaPredicted RBP4.89□□□□□ -1.63
RAB5B-207ENST00000549915 TARBP1Q13395 1621 aaKnown RBP4.88□□□□□ -1.63
RAB5B-207ENST00000549915 TRPM1Q7Z4N2 1603 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 SENP3-EIF4A1A0A087X0R7 540 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 RNF225M0QZC1 329 aaPredicted RBP4.88□□□□□ -1.63
RAB5B-207ENST00000549915 SMTNP53814 917 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 GTF2IP78347 998 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 POU4F2Q12837 409 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 EFHC2Q5JST6 749 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 HDGFL1Q5TGJ6 251 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 FIGNL1Q6PIW4 674 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 TBC1D9Q6ZT07 1266 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 FRAT1Q92837 279 aaPredicted RBP4.88□□□□□ -1.63
RAB5B-207ENST00000549915 SLC4A9Q96Q91 983 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 FHDC1Q9C0D6 1143 aaPredicted RBP4.88□□□□□ -1.63
RAB5B-207ENST00000549915 ETNK1Q9HBU6 452 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 BRPF3Q9ULD4 1205 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 CHMP3Q9Y3E7 222 aa4.88□□□□□ -1.63
RAB5B-207ENST00000549915 GPC6Q9Y625 555 aaPredicted RBP4.88□□□□□ -1.63
RAB5B-207ENST00000549915 NUP153P49790 1475 aaKnown RBP4.88□□□□□ -1.63
RAB5B-207ENST00000549915 PRDM15P57071 1507 aaPredicted RBP4.87□□□□□ -1.63
RAB5B-207ENST00000549915 KIAA0586Q9BVV6 1533 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 USP17L3A6NCW0 530 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 USP17L4A6NCW7 530 aa4.87□□□□□ -1.63
RAB5B-207ENST00000549915 M0R2N6 131 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms