RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 EXOSC9Q06265 439 aaKnown RBP22.83■■□□□ 1.25
RAPGEF3-220ENST00000549347 SLFN5Q08AF3 891 aa22.83■■□□□ 1.25
RAPGEF3-220ENST00000549347 MAP3K15Q6ZN16 1313 aa22.82■■□□□ 1.24
RAPGEF3-220ENST00000549347 DDR1Q08345 913 aa22.82■■□□□ 1.24
RAPGEF3-220ENST00000549347 CCDC30Q5VVM6 783 aa22.82■■□□□ 1.24
RAPGEF3-220ENST00000549347 CLEC4GQ6UXB4 293 aa22.82■■□□□ 1.24
RAPGEF3-220ENST00000549347 ARFGEF2Q9Y6D5 1785 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 ERVV-1B6SEH8 477 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 NFIXQ14938 502 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 KIF6Q6ZMV9 814 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 TTLL7Q6ZT98 887 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 ZNF652Q9Y2D9 606 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 C10orf71Q711Q0 1435 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 ATP10DQ9P241 1426 aa22.81■■□□□ 1.24
RAPGEF3-220ENST00000549347 KIAA1551Q9HCM1 1747 aa22.8■■□□□ 1.24
RAPGEF3-220ENST00000549347 POLRMTO00411 1230 aaKnown RBP22.8■■□□□ 1.24
RAPGEF3-220ENST00000549347 HYPKQ9NX55 129 aa22.8■■□□□ 1.24
RAPGEF3-220ENST00000549347 VAMP4O75379 141 aa22.79■■□□□ 1.24
RAPGEF3-220ENST00000549347 TBC1D9BQ66K14 1250 aa22.79■■□□□ 1.24
RAPGEF3-220ENST00000549347 TRMT2AQ8IZ69 625 aaKnown RBP22.79■■□□□ 1.24
RAPGEF3-220ENST00000549347 CDCA7LQ96GN5 454 aa22.79■■□□□ 1.24
RAPGEF3-220ENST00000549347 FHDC1Q9C0D6 1143 aaPredicted RBP22.79■■□□□ 1.24
RAPGEF3-220ENST00000549347 PARP3Q9Y6F1 533 aa22.79■■□□□ 1.24
RAPGEF3-220ENST00000549347 CARMIL3Q8ND23 1372 aa22.78■■□□□ 1.24
RAPGEF3-220ENST00000549347 COPS6Q7L5N1 327 aa22.78■■□□□ 1.24
RAPGEF3-220ENST00000549347 XAGE3Q8WTP9 111 aa22.78■■□□□ 1.24
RAPGEF3-220ENST00000549347 HLFQ16534 295 aa22.77■■□□□ 1.24
RAPGEF3-220ENST00000549347 ZBTB3Q9H5J0 574 aa22.77■■□□□ 1.24
RAPGEF3-220ENST00000549347 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
RAPGEF3-220ENST00000549347 GIGYF2Q6Y7W6 1299 aaKnown RBP22.75■■□□□ 1.23
RAPGEF3-220ENST00000549347 STK31Q9BXU1 1019 aa22.75■■□□□ 1.23
RAPGEF3-220ENST00000549347 CD2APQ9Y5K6 639 aa22.75■■□□□ 1.23
RAPGEF3-220ENST00000549347 AIMP1Q12904 312 aaKnown RBP22.74■■□□□ 1.23
RAPGEF3-220ENST00000549347 BICDL1Q6ZP65 573 aa22.74■■□□□ 1.23
RAPGEF3-220ENST00000549347 SYT17Q9BSW7 474 aa22.74■■□□□ 1.23
RAPGEF3-220ENST00000549347 ANKRD31Q8N7Z5 1873 aa22.74■■□□□ 1.23
RAPGEF3-220ENST00000549347 SERPINB2P05120 415 aa22.73■■□□□ 1.23
RAPGEF3-220ENST00000549347 SETDB2Q96T68 719 aa22.73■■□□□ 1.23
RAPGEF3-220ENST00000549347 PHAXQ9H814 394 aaKnown RBP22.73■■□□□ 1.23
RAPGEF3-220ENST00000549347 DLEC1Q9Y238 1755 aa22.72■■□□□ 1.23
RAPGEF3-220ENST00000549347 KLHL34Q8N239 644 aa22.72■■□□□ 1.23
RAPGEF3-220ENST00000549347 PLBD2Q8NHP8 589 aa22.72■■□□□ 1.23
RAPGEF3-220ENST00000549347 NIP7Q9Y221 180 aaKnown RBP eCLIP22.72■■□□□ 1.23
RAPGEF3-220ENST00000549347 IBTKQ9P2D0 1353 aaPredicted RBP22.72■■□□□ 1.23
RAPGEF3-220ENST00000549347 BRCA1P38398 1863 aaKnown RBP22.71■■□□□ 1.23
RAPGEF3-220ENST00000549347 TCERG1O14776 1098 aaKnown RBP22.71■■□□□ 1.23
RAPGEF3-220ENST00000549347 PXDNLA1KZ92 1463 aa22.71■■□□□ 1.23
RAPGEF3-220ENST00000549347 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
RAPGEF3-220ENST00000549347 HSP90AB3PQ58FF7 597 aa22.7■■□□□ 1.22
RAPGEF3-220ENST00000549347 ANKRD13DQ6ZTN6 518 aa22.7■■□□□ 1.22
RAPGEF3-220ENST00000549347 UBN2Q6ZU65 1347 aa22.7■■□□□ 1.22
RAPGEF3-220ENST00000549347 SLC4A2P04920 1241 aa22.69■■□□□ 1.22
RAPGEF3-220ENST00000549347 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
RAPGEF3-220ENST00000549347 NLGN2Q8NFZ4 835 aa22.69■■□□□ 1.22
RAPGEF3-220ENST00000549347 ZNF428Q96B54 188 aa22.69■■□□□ 1.22
RAPGEF3-220ENST00000549347 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF3-220ENST00000549347 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
RAPGEF3-220ENST00000549347 PRR5LQ6MZQ0 368 aa22.68■■□□□ 1.22
RAPGEF3-220ENST00000549347 DDX58O95786 925 aaKnown RBP22.67■■□□□ 1.22
RAPGEF3-220ENST00000549347 TCIRG1Q13488 830 aa22.67■■□□□ 1.22
RAPGEF3-220ENST00000549347 CNBD1Q8NA66 436 aa22.67■■□□□ 1.22
RAPGEF3-220ENST00000549347 ADCY9O60503 1353 aa22.66■■□□□ 1.22
RAPGEF3-220ENST00000549347 TNRC6CQ9HCJ0 1690 aaKnown RBP22.66■■□□□ 1.22
RAPGEF3-220ENST00000549347 GPTP24298 496 aa22.66■■□□□ 1.22
RAPGEF3-220ENST00000549347 FLIIQ13045 1269 aa22.66■■□□□ 1.22
RAPGEF3-220ENST00000549347 PARP10Q53GL7 1025 aa22.66■■□□□ 1.22
RAPGEF3-220ENST00000549347 G2E3Q7L622 706 aa22.66■■□□□ 1.22
RAPGEF3-220ENST00000549347 TGFB2P61812 414 aa22.65■■□□□ 1.22
RAPGEF3-220ENST00000549347 NBPF5PQ86XG9 351 aaPredicted RBP22.65■■□□□ 1.22
RAPGEF3-220ENST00000549347 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
RAPGEF3-220ENST00000549347 RIC3Q7Z5B4 369 aa22.64■■□□□ 1.21
RAPGEF3-220ENST00000549347 NYXQ9GZU5 481 aa22.64■■□□□ 1.21
RAPGEF3-220ENST00000549347 LAMB2P55268 1798 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 NTSR2O95665 410 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 ST5P78524 1137 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 SUSD4Q5VX71 490 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 KSR2Q6VAB6 950 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 TPTE2Q6XPS3 522 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 ISCA1Q9BUE6 129 aa22.63■■□□□ 1.21
RAPGEF3-220ENST00000549347 ALDH1L2Q3SY69 923 aa22.62■■□□□ 1.21
RAPGEF3-220ENST00000549347 NLRP10Q86W26 655 aa22.62■■□□□ 1.21
RAPGEF3-220ENST00000549347 BRIP1Q9BX63 1249 aa22.62■■□□□ 1.21
RAPGEF3-220ENST00000549347 ABCC12Q96J65 1359 aa22.62■■□□□ 1.21
RAPGEF3-220ENST00000549347 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 PI4KAP2A4QPH2 592 aa22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 NPHP1O15259 732 aa22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 PI4KAP1Q8N8J0 262 aa22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 METTL22Q9BUU2 404 aaPredicted RBP22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 MAP3K2Q9Y2U5 619 aa22.61■■□□□ 1.21
RAPGEF3-220ENST00000549347 DDX60Q8IY21 1712 aaKnown RBP22.6■■□□□ 1.21
RAPGEF3-220ENST00000549347 FAM177BA6PVY3 158 aa22.6■■□□□ 1.21
RAPGEF3-220ENST00000549347 TRIM28Q13263 835 aaKnown RBP22.6■■□□□ 1.21
RAPGEF3-220ENST00000549347 MRPL50Q8N5N7 158 aaKnown RBP22.6■■□□□ 1.21
RAPGEF3-220ENST00000549347 SSH1Q8WYL5 1049 aa22.6■■□□□ 1.21
RAPGEF3-220ENST00000549347 ARFGEF1Q9Y6D6 1849 aa22.59■■□□□ 1.21
RAPGEF3-220ENST00000549347 ATP5J2-PTCD1G3V325 749 aa22.58■■□□□ 1.21
RAPGEF3-220ENST00000549347 DPEP1P16444 411 aa22.58■■□□□ 1.21
RAPGEF3-220ENST00000549347 NUTM1Q86Y26 1132 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms