RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-212ENST00000549173 IL17REQ8NFR9 667 aa13.24□□□□□ -0.29
CALCOCO1-212ENST00000549173 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
CALCOCO1-212ENST00000549173 CEMIPQ8WUJ3 1361 aa13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 BCORQ6W2J9 1755 aa13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 PER1O15534 1290 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 C7orf43Q8WVR3 580 aa13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 MKRN1Q9UHC7 482 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-212ENST00000549173 KLRG2A4D1S0 409 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-212ENST00000549173 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-212ENST00000549173 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-212ENST00000549173 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
CALCOCO1-212ENST00000549173 NPHP1O15259 732 aa13.21□□□□□ -0.29
CALCOCO1-212ENST00000549173 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
CALCOCO1-212ENST00000549173 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
CALCOCO1-212ENST00000549173 CCDC93Q567U6 631 aa13.21□□□□□ -0.29
CALCOCO1-212ENST00000549173 TMEM88BA6NKF7 163 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 FOXN1O15353 648 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 A1BGP04217 495 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 NPR1P16066 1061 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 FKBP4Q02790 459 aaKnown RBP eCLIP13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 ADAMTSL1Q8N6G6 1762 aa13.2□□□□□ -0.3
CALCOCO1-212ENST00000549173 PNMA8AQ86V59 439 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-212ENST00000549173 NBPF5PQ86XG9 351 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-212ENST00000549173 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
CALCOCO1-212ENST00000549173 AIDAQ96BJ3 306 aa13.19□□□□□ -0.3
CALCOCO1-212ENST00000549173 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
CALCOCO1-212ENST00000549173 BTBD11A6QL63 1104 aa13.18□□□□□ -0.3
CALCOCO1-212ENST00000549173 TPTE2Q6XPS3 522 aa13.18□□□□□ -0.3
CALCOCO1-212ENST00000549173 WBP1LQ9NX94 342 aa13.18□□□□□ -0.3
CALCOCO1-212ENST00000549173 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
CALCOCO1-212ENST00000549173 RASSF10A6NK89 507 aa13.17□□□□□ -0.3
CALCOCO1-212ENST00000549173 U2SURPO15042 1029 aaKnown RBP13.17□□□□□ -0.3
CALCOCO1-212ENST00000549173 VEGFBP49765 207 aa13.17□□□□□ -0.3
CALCOCO1-212ENST00000549173 FZD9O00144 591 aa13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 EPHX2P34913 555 aa13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 GPC2Q8N158 579 aa13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
CALCOCO1-212ENST00000549173 ZNF541Q9H0D2 1346 aa13.15□□□□□ -0.3
CALCOCO1-212ENST00000549173 PSMD1Q99460 953 aa13.15□□□□□ -0.3
CALCOCO1-212ENST00000549173 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 KCNQ3O43525 872 aa13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 IARSP41252 1262 aaKnown RBP13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 CC2D2BQ6DHV5 1058 aa13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
CALCOCO1-212ENST00000549173 CRY2Q49AN0 593 aa13.13□□□□□ -0.31
CALCOCO1-212ENST00000549173 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
CALCOCO1-212ENST00000549173 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
CALCOCO1-212ENST00000549173 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
CALCOCO1-212ENST00000549173 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 LBX1P52954 281 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 CFAP53Q96M91 514 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 THSD7BQ9C0I4 1608 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 RNF123Q5XPI4 1314 aa13.12□□□□□ -0.31
CALCOCO1-212ENST00000549173 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
CALCOCO1-212ENST00000549173 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
CALCOCO1-212ENST00000549173 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
CALCOCO1-212ENST00000549173 WDR33Q9C0J8 1336 aaKnown RBP13.11□□□□□ -0.31
CALCOCO1-212ENST00000549173 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-212ENST00000549173 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
CALCOCO1-212ENST00000549173 PIP4K2AP48426 406 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-212ENST00000549173 MAP1SQ66K74 1059 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO1-212ENST00000549173 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
CALCOCO1-212ENST00000549173 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
CALCOCO1-212ENST00000549173 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 HOXA10P31260 410 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 ECE1P42892 770 aa13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 EIF6P56537 245 aaKnown RBP13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
CALCOCO1-212ENST00000549173 SLC34A2O95436 690 aa13.08□□□□□ -0.32
CALCOCO1-212ENST00000549173 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO1-212ENST00000549173 HLFQ16534 295 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms