RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 SOGA3Q5TF21 947 aa22.83■■□□□ 1.25
VDR-205ENST00000548664 ADAMTSL1Q8N6G6 1762 aa22.83■■□□□ 1.24
VDR-205ENST00000548664 PASKQ96RG2 1323 aa22.82■■□□□ 1.24
VDR-205ENST00000548664 ST5P78524 1137 aa22.82■■□□□ 1.24
VDR-205ENST00000548664 MASTLQ96GX5 879 aa22.82■■□□□ 1.24
VDR-205ENST00000548664 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
VDR-205ENST00000548664 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
VDR-205ENST00000548664 CEMIPQ8WUJ3 1361 aa22.81■■□□□ 1.24
VDR-205ENST00000548664 NPHP1O15259 732 aa22.81■■□□□ 1.24
VDR-205ENST00000548664 PER1O15534 1290 aaPredicted RBP22.81■■□□□ 1.24
VDR-205ENST00000548664 GAS2L2Q8NHY3 880 aa22.81■■□□□ 1.24
VDR-205ENST00000548664 L3MBTL3Q96JM7 780 aaPredicted RBP22.81■■□□□ 1.24
VDR-205ENST00000548664 IQCA1LA6NCM1 817 aa22.8■■□□□ 1.24
VDR-205ENST00000548664 FOXN1O15353 648 aa22.8■■□□□ 1.24
VDR-205ENST00000548664 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
VDR-205ENST00000548664 LDHDQ86WU2 507 aa22.8■■□□□ 1.24
VDR-205ENST00000548664 NPM2Q86SE8 214 aaKnown RBP22.79■■□□□ 1.24
VDR-205ENST00000548664 DZIP3Q86Y13 1208 aaKnown RBP22.79■■□□□ 1.24
VDR-205ENST00000548664 C7orf43Q8WVR3 580 aa22.79■■□□□ 1.24
VDR-205ENST00000548664 TAF1DQ9H5J8 278 aaPredicted RBP22.78■■□□□ 1.24
VDR-205ENST00000548664 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
VDR-205ENST00000548664 KCNQ3O43525 872 aa22.77■■□□□ 1.24
VDR-205ENST00000548664 CCDC93Q567U6 631 aa22.76■■□□□ 1.23
VDR-205ENST00000548664 PRDM10Q9NQV6 1147 aa22.76■■□□□ 1.23
VDR-205ENST00000548664 ITGBL1O95965 494 aaPredicted RBP22.75■■□□□ 1.23
VDR-205ENST00000548664 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
VDR-205ENST00000548664 USP16Q9Y5T5 823 aa22.75■■□□□ 1.23
VDR-205ENST00000548664 ZNF541Q9H0D2 1346 aa22.75■■□□□ 1.23
VDR-205ENST00000548664 BTBD11A6QL63 1104 aa22.74■■□□□ 1.23
VDR-205ENST00000548664 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
VDR-205ENST00000548664 NBPF5PQ86XG9 351 aaPredicted RBP22.74■■□□□ 1.23
VDR-205ENST00000548664 TMEM88BA6NKF7 163 aa22.73■■□□□ 1.23
VDR-205ENST00000548664 NPR1P16066 1061 aa22.73■■□□□ 1.23
VDR-205ENST00000548664 VEGFBP49765 207 aa22.73■■□□□ 1.23
VDR-205ENST00000548664 FKBP4Q02790 459 aaKnown RBP eCLIP22.73■■□□□ 1.23
VDR-205ENST00000548664 PRAMEF22A3QJZ6 481 aa22.72■■□□□ 1.23
VDR-205ENST00000548664 KLRG2A4D1S0 409 aaPredicted RBP22.72■■□□□ 1.23
VDR-205ENST00000548664 ZNF277Q9NRM2 450 aaPredicted RBP22.72■■□□□ 1.23
VDR-205ENST00000548664 NPC1L1Q9UHC9 1359 aa22.72■■□□□ 1.23
VDR-205ENST00000548664 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
VDR-205ENST00000548664 CTCFP49711 727 aaPredicted RBP22.71■■□□□ 1.23
VDR-205ENST00000548664 EAPPQ56P03 285 aaPredicted RBP22.71■■□□□ 1.23
VDR-205ENST00000548664 PHACTR3Q96KR7 559 aa22.71■■□□□ 1.23
VDR-205ENST00000548664 HACL1Q9UJ83 578 aa22.71■■□□□ 1.23
VDR-205ENST00000548664 ZNF652Q9Y2D9 606 aa22.71■■□□□ 1.23
VDR-205ENST00000548664 OLFM4Q6UX06 510 aa22.7■■□□□ 1.22
VDR-205ENST00000548664 AIDAQ96BJ3 306 aa22.7■■□□□ 1.22
VDR-205ENST00000548664 EPHX2P34913 555 aa22.69■■□□□ 1.22
VDR-205ENST00000548664 WBP1LQ9NX94 342 aa22.69■■□□□ 1.22
VDR-205ENST00000548664 SNED1Q8TER0 1413 aa22.68■■□□□ 1.22
VDR-205ENST00000548664 RNF123Q5XPI4 1314 aa22.68■■□□□ 1.22
VDR-205ENST00000548664 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
VDR-205ENST00000548664 RTKN2Q8IZC4 609 aa22.68■■□□□ 1.22
VDR-205ENST00000548664 NUP98P52948 1817 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 FZD9O00144 591 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 RGL2O15211 777 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 SNRPA1P09661 255 aaKnown RBP22.67■■□□□ 1.22
VDR-205ENST00000548664 TPTE2Q6XPS3 522 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 NIP7Q9Y221 180 aaKnown RBP eCLIP22.67■■□□□ 1.22
VDR-205ENST00000548664 LTBP1Q14766 1721 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 THSD7BQ9C0I4 1608 aa22.67■■□□□ 1.22
VDR-205ENST00000548664 RASSF10A6NK89 507 aa22.66■■□□□ 1.22
VDR-205ENST00000548664 IARSP41252 1262 aaKnown RBP22.66■■□□□ 1.22
VDR-205ENST00000548664 PNMA8AQ86V59 439 aaPredicted RBP22.66■■□□□ 1.22
VDR-205ENST00000548664 CLEC11AQ9Y240 323 aa22.66■■□□□ 1.22
VDR-205ENST00000548664 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
VDR-205ENST00000548664 LBX1P52954 281 aa22.65■■□□□ 1.22
VDR-205ENST00000548664 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
VDR-205ENST00000548664 MAP1SQ66K74 1059 aaPredicted RBP22.65■■□□□ 1.22
VDR-205ENST00000548664 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
VDR-205ENST00000548664 CNTROBQ8N137 903 aa22.65■■□□□ 1.22
VDR-205ENST00000548664 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
VDR-205ENST00000548664 COL4A5P29400 1685 aa22.65■■□□□ 1.22
VDR-205ENST00000548664 GPC2Q8N158 579 aa22.64■■□□□ 1.21
VDR-205ENST00000548664 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.21
VDR-205ENST00000548664 FAM177BA6PVY3 158 aa22.63■■□□□ 1.21
VDR-205ENST00000548664 ALDH1B1P30837 517 aa22.63■■□□□ 1.21
VDR-205ENST00000548664 DEFB115Q30KQ5 88 aa22.63■■□□□ 1.21
VDR-205ENST00000548664 SYNE4Q8N205 404 aa22.63■■□□□ 1.21
VDR-205ENST00000548664 HLFQ16534 295 aa22.62■■□□□ 1.21
VDR-205ENST00000548664 MCM10Q7L590 875 aa22.62■■□□□ 1.21
VDR-205ENST00000548664 HSPA8P11142 646 aaKnown RBP22.61■■□□□ 1.21
VDR-205ENST00000548664 PSMD1Q99460 953 aa22.61■■□□□ 1.21
VDR-205ENST00000548664 WDR33Q9C0J8 1336 aaKnown RBP22.6■■□□□ 1.21
VDR-205ENST00000548664 CRY2Q49AN0 593 aa22.6■■□□□ 1.21
VDR-205ENST00000548664 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
VDR-205ENST00000548664 DLG5Q8TDM6 1919 aa22.6■■□□□ 1.21
VDR-205ENST00000548664 KDM3BQ7LBC6 1761 aa22.6■■□□□ 1.21
VDR-205ENST00000548664 ABCC12Q96J65 1359 aa22.6■■□□□ 1.21
VDR-205ENST00000548664 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
VDR-205ENST00000548664 ABT1Q9ULW3 272 aaKnown RBP22.59■■□□□ 1.21
VDR-205ENST00000548664 MAP2K1Q02750 393 aaPredicted RBP22.58■■□□□ 1.21
VDR-205ENST00000548664 JDP2Q8WYK2 163 aa22.58■■□□□ 1.21
VDR-205ENST00000548664 CFAP53Q96M91 514 aa22.58■■□□□ 1.21
VDR-205ENST00000548664 GTF2E1P29083 439 aaPredicted RBP22.57■■□□□ 1.2
VDR-205ENST00000548664 DCTN1Q14203 1278 aa22.57■■□□□ 1.2
VDR-205ENST00000548664 ABHD8Q96I13 439 aa22.57■■□□□ 1.2
VDR-205ENST00000548664 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
VDR-205ENST00000548664 RIC1Q4ADV7 1423 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms