RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
SLC48A1-206ENST00000548498 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-206ENST00000548498 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
SLC48A1-206ENST00000548498 TAF1DQ9H5J8 278 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-206ENST00000548498 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-206ENST00000548498 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
SLC48A1-206ENST00000548498 COL4A5P29400 1685 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 A0A087WZG4 1122 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 SRGNP10124 158 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 LBX1P52954 281 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 CNBD1Q8NA66 436 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
SLC48A1-206ENST00000548498 CASP8AP2Q9UKL3 1982 aa13.12□□□□□ -0.31
SLC48A1-206ENST00000548498 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
SLC48A1-206ENST00000548498 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
SLC48A1-206ENST00000548498 STARD3NLO95772 234 aa13.12□□□□□ -0.31
SLC48A1-206ENST00000548498 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
SLC48A1-206ENST00000548498 WBP1LQ9NX94 342 aa13.12□□□□□ -0.31
SLC48A1-206ENST00000548498 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
SLC48A1-206ENST00000548498 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 MASTLQ96GX5 879 aa13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 RNF123Q5XPI4 1314 aa13.1□□□□□ -0.31
SLC48A1-206ENST00000548498 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 A1BGP04217 495 aa13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 ST5P78524 1137 aa13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
SLC48A1-206ENST00000548498 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 NPHP1O15259 732 aa13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 EPHX2P34913 555 aa13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 HACL1Q9UJ83 578 aa13.08□□□□□ -0.32
SLC48A1-206ENST00000548498 LAMB2P55268 1798 aa13.07□□□□□ -0.32
SLC48A1-206ENST00000548498 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLC48A1-206ENST00000548498 DZIP3Q86Y13 1208 aaKnown RBP13.07□□□□□ -0.32
SLC48A1-206ENST00000548498 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
SLC48A1-206ENST00000548498 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
SLC48A1-206ENST00000548498 TNRC18O15417 2968 aaPredicted RBP13.07□□□□□ -0.32
SLC48A1-206ENST00000548498 KCNQ3O43525 872 aa13.06□□□□□ -0.32
SLC48A1-206ENST00000548498 TEFQ10587 303 aa13.06□□□□□ -0.32
SLC48A1-206ENST00000548498 DEFB115Q30KQ5 88 aa13.06□□□□□ -0.32
SLC48A1-206ENST00000548498 KDM3BQ7LBC6 1761 aa13.06□□□□□ -0.32
SLC48A1-206ENST00000548498 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
SLC48A1-206ENST00000548498 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
SLC48A1-206ENST00000548498 FMR1Q06787 632 aaKnown RBP eCLIP13.05□□□□□ -0.32
SLC48A1-206ENST00000548498 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
SLC48A1-206ENST00000548498 TEX13AQ9BXU3 409 aaPredicted RBP13.05□□□□□ -0.32
SLC48A1-206ENST00000548498 ABT1Q9ULW3 272 aaKnown RBP13.05□□□□□ -0.32
SLC48A1-206ENST00000548498 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
SLC48A1-206ENST00000548498 PRAMEF22A3QJZ6 481 aa13.04□□□□□ -0.32
SLC48A1-206ENST00000548498 NPR1P16066 1061 aa13.04□□□□□ -0.32
SLC48A1-206ENST00000548498 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
SLC48A1-206ENST00000548498 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
SLC48A1-206ENST00000548498 FMNL2Q96PY5 1086 aa13.04□□□□□ -0.32
SLC48A1-206ENST00000548498 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
SLC48A1-206ENST00000548498 FZD9O00144 591 aa13.03□□□□□ -0.32
SLC48A1-206ENST00000548498 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
SLC48A1-206ENST00000548498 PNMA8AQ86V59 439 aaPredicted RBP13.03□□□□□ -0.32
SLC48A1-206ENST00000548498 TAF1P21675 1872 aa13.03□□□□□ -0.32
SLC48A1-206ENST00000548498 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
SLC48A1-206ENST00000548498 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.32
SLC48A1-206ENST00000548498 POLR2AP24928 1970 aaKnown RBP13.02□□□□□ -0.32
SLC48A1-206ENST00000548498 KLRG2A4D1S0 409 aaPredicted RBP13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 GPC2Q8N158 579 aa13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 DDX21Q9NR30 783 aaKnown RBP eCLIP13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 PDE4DIPQ5VU43 2346 aa13.02□□□□□ -0.33
SLC48A1-206ENST00000548498 CCDC85CA6NKD9 419 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 CYP4F22Q6NT55 531 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 CAPNS2Q96L46 248 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
SLC48A1-206ENST00000548498 MLLT1Q03111 559 aaPredicted RBP13□□□□□ -0.33
SLC48A1-206ENST00000548498 GRM1Q13255 1194 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms