RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MCM10Q7L590 875 aa16.02■□□□□ 0.16
TRAFD1-205ENST00000548277 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
TRAFD1-205ENST00000548277 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
TRAFD1-205ENST00000548277 CNKSR1Q969H4 720 aa16.01■□□□□ 0.15
TRAFD1-205ENST00000548277 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
TRAFD1-205ENST00000548277 POTEIP0CG38 1075 aa16■□□□□ 0.15
TRAFD1-205ENST00000548277 POTEJP0CG39 1038 aa16■□□□□ 0.15
TRAFD1-205ENST00000548277 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
TRAFD1-205ENST00000548277 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
TRAFD1-205ENST00000548277 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
TRAFD1-205ENST00000548277 TNS4Q8IZW8 715 aa16■□□□□ 0.15
TRAFD1-205ENST00000548277 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
TRAFD1-205ENST00000548277 RSPH6AQ9H0K4 717 aa16■□□□□ 0.15
TRAFD1-205ENST00000548277 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
TRAFD1-205ENST00000548277 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
TRAFD1-205ENST00000548277 HSPA1AP0DMV8 641 aaKnown RBP15.99■□□□□ 0.15
TRAFD1-205ENST00000548277 HSPA1BP0DMV9 641 aaKnown RBP15.99■□□□□ 0.15
TRAFD1-205ENST00000548277 SRGNP10124 158 aa15.99■□□□□ 0.15
TRAFD1-205ENST00000548277 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
TRAFD1-205ENST00000548277 MASTLQ96GX5 879 aa15.99■□□□□ 0.15
TRAFD1-205ENST00000548277 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
TRAFD1-205ENST00000548277 STYK1Q6J9G0 422 aa15.98■□□□□ 0.15
TRAFD1-205ENST00000548277 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
TRAFD1-205ENST00000548277 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
TRAFD1-205ENST00000548277 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
TRAFD1-205ENST00000548277 CEMIPQ8WUJ3 1361 aa15.98■□□□□ 0.15
TRAFD1-205ENST00000548277 SNRPA1P09661 255 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-205ENST00000548277 OLFM4Q6UX06 510 aa15.97■□□□□ 0.15
TRAFD1-205ENST00000548277 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
TRAFD1-205ENST00000548277 DLG5Q8TDM6 1919 aa15.97■□□□□ 0.15
TRAFD1-205ENST00000548277 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
TRAFD1-205ENST00000548277 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAFD1-205ENST00000548277 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
TRAFD1-205ENST00000548277 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
TRAFD1-205ENST00000548277 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
TRAFD1-205ENST00000548277 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
TRAFD1-205ENST00000548277 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
TRAFD1-205ENST00000548277 NUP98P52948 1817 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 GTF2E1P29083 439 aaPredicted RBP15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 HLFQ16534 295 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 CLEC4GQ6UXB4 293 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 TPTE2Q6XPS3 522 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 LTBP3Q9NS15 1303 aa15.94■□□□□ 0.14
TRAFD1-205ENST00000548277 PCNTO95613 3336 aa15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 NPR1P16066 1061 aa15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 CCDC93Q567U6 631 aa15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 EAPPQ56P03 285 aaPredicted RBP15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 SOGA3Q5TF21 947 aa15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 SCN4AP35499 1836 aa15.93■□□□□ 0.14
TRAFD1-205ENST00000548277 C7orf43Q8WVR3 580 aa15.92■□□□□ 0.14
TRAFD1-205ENST00000548277 TAF7Q15545 349 aaPredicted RBP15.91■□□□□ 0.14
TRAFD1-205ENST00000548277 RRP7AQ9Y3A4 280 aaKnown RBP15.91■□□□□ 0.14
TRAFD1-205ENST00000548277 ZNF541Q9H0D2 1346 aa15.91■□□□□ 0.14
TRAFD1-205ENST00000548277 FKBP4Q02790 459 aaKnown RBP eCLIP15.9■□□□□ 0.14
TRAFD1-205ENST00000548277 NUTM1Q86Y26 1132 aa15.9■□□□□ 0.14
TRAFD1-205ENST00000548277 SYNE4Q8N205 404 aa15.9■□□□□ 0.14
TRAFD1-205ENST00000548277 TAF1DQ9H5J8 278 aaPredicted RBP15.9■□□□□ 0.14
TRAFD1-205ENST00000548277 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
TRAFD1-205ENST00000548277 IQCA1LA6NCM1 817 aa15.89■□□□□ 0.13
TRAFD1-205ENST00000548277 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
TRAFD1-205ENST00000548277 MYL6BP14649 208 aa15.88■□□□□ 0.13
TRAFD1-205ENST00000548277 LAMB4A4D0S4 1761 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 NEFMP07197 916 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 GPTP24298 496 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 IARSP41252 1262 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 LDHDQ86WU2 507 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 RTKN2Q8IZC4 609 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 RNF123Q5XPI4 1314 aa15.87■□□□□ 0.13
TRAFD1-205ENST00000548277 KLRG2A4D1S0 409 aaPredicted RBP15.86■□□□□ 0.13
TRAFD1-205ENST00000548277 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
TRAFD1-205ENST00000548277 TTLL7Q6ZT98 887 aa15.86■□□□□ 0.13
TRAFD1-205ENST00000548277 GJA3Q9Y6H8 435 aa15.86■□□□□ 0.13
TRAFD1-205ENST00000548277 FOXN1O15353 648 aa15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 EPHX2P34913 555 aa15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 MAP1SQ66K74 1059 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 SLC51AQ86UW1 340 aa15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 PASKQ96RG2 1323 aa15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
TRAFD1-205ENST00000548277 TMEM88BA6NKF7 163 aa15.84■□□□□ 0.13
TRAFD1-205ENST00000548277 ITGBL1O95965 494 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-205ENST00000548277 VEGFBP49765 207 aa15.84■□□□□ 0.13
TRAFD1-205ENST00000548277 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
TRAFD1-205ENST00000548277 ABCC12Q96J65 1359 aa15.84■□□□□ 0.13
TRAFD1-205ENST00000548277 SUSD4Q5VX71 490 aa15.83■□□□□ 0.12
TRAFD1-205ENST00000548277 CNTROBQ8N137 903 aa15.83■□□□□ 0.12
TRAFD1-205ENST00000548277 JDP2Q8WYK2 163 aa15.83■□□□□ 0.12
TRAFD1-205ENST00000548277 RPGRQ92834 1020 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-205ENST00000548277 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
TRAFD1-205ENST00000548277 CNTNAP1P78357 1384 aa15.83■□□□□ 0.12
TRAFD1-205ENST00000548277 FZD9O00144 591 aa15.82■□□□□ 0.12
TRAFD1-205ENST00000548277 EIF4A1P60842 406 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-205ENST00000548277 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms