RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
SVOP-202ENST00000548229 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.01
SVOP-202ENST00000548229 ITGBL1O95965 494 aaPredicted RBP21.39■■□□□ 1.01
SVOP-202ENST00000548229 HSPA5P11021 654 aaKnown RBP21.39■■□□□ 1.01
SVOP-202ENST00000548229 PNMA8AQ86V59 439 aaPredicted RBP21.39■■□□□ 1.01
SVOP-202ENST00000548229 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.01
SVOP-202ENST00000548229 SCN7AQ01118 1682 aa21.38■■□□□ 1.01
SVOP-202ENST00000548229 HACL1Q9UJ83 578 aa21.38■■□□□ 1.01
SVOP-202ENST00000548229 CLEC11AQ9Y240 323 aa21.38■■□□□ 1.01
SVOP-202ENST00000548229 COL11A2P13942 1736 aaPredicted RBP21.38■■□□□ 1.01
SVOP-202ENST00000548229 SLX4Q8IY92 1834 aa21.37■■□□□ 1.01
SVOP-202ENST00000548229 GNAT3A8MTJ3 354 aa21.37■■□□□ 1.01
SVOP-202ENST00000548229 CAMTA2O94983 1202 aa21.37■■□□□ 1.01
SVOP-202ENST00000548229 MAP2K1Q02750 393 aaPredicted RBP21.37■■□□□ 1.01
SVOP-202ENST00000548229 EAPPQ56P03 285 aaPredicted RBP21.37■■□□□ 1.01
SVOP-202ENST00000548229 CLEC4GQ6UXB4 293 aa21.37■■□□□ 1.01
SVOP-202ENST00000548229 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
SVOP-202ENST00000548229 RASSF10A6NK89 507 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 NPR1P16066 1061 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 LBX1P52954 281 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 FKBP4Q02790 459 aaKnown RBP eCLIP21.36■■□□□ 1.01
SVOP-202ENST00000548229 DEFB115Q30KQ5 88 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
SVOP-202ENST00000548229 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 C7orf43Q8WVR3 580 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 ZNF652Q9Y2D9 606 aa21.36■■□□□ 1.01
SVOP-202ENST00000548229 NBPF5PQ86XG9 351 aaPredicted RBP21.35■■□□□ 1.01
SVOP-202ENST00000548229 DZIP3Q86Y13 1208 aaKnown RBP21.35■■□□□ 1.01
SVOP-202ENST00000548229 SLC34A2O95436 690 aa21.34■■□□□ 1.01
SVOP-202ENST00000548229 A1BGP04217 495 aa21.34■■□□□ 1.01
SVOP-202ENST00000548229 EPHX2P34913 555 aa21.34■■□□□ 1.01
SVOP-202ENST00000548229 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
SVOP-202ENST00000548229 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
SVOP-202ENST00000548229 TPTE2Q6XPS3 522 aa21.33■■□□□ 1.01
SVOP-202ENST00000548229 CNTROBQ8N137 903 aa21.33■■□□□ 1.01
SVOP-202ENST00000548229 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
SVOP-202ENST00000548229 KLRG2A4D1S0 409 aaPredicted RBP21.32■■□□□ 1
SVOP-202ENST00000548229 RGL2O15211 777 aa21.32■■□□□ 1
SVOP-202ENST00000548229 ALDH1B1P30837 517 aa21.31■■□□□ 1
SVOP-202ENST00000548229 ABHD8Q96I13 439 aa21.31■■□□□ 1
SVOP-202ENST00000548229 ZNF277Q9NRM2 450 aaPredicted RBP21.31■■□□□ 1
SVOP-202ENST00000548229 WDR33Q9C0J8 1336 aaKnown RBP21.3■■□□□ 1
SVOP-202ENST00000548229 HSPA8P11142 646 aaKnown RBP21.3■■□□□ 1
SVOP-202ENST00000548229 GPC2Q8N158 579 aa21.3■■□□□ 1
SVOP-202ENST00000548229 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
SVOP-202ENST00000548229 CACNA1SQ13698 1873 aa21.29■■□□□ 1
SVOP-202ENST00000548229 BTBD11A6QL63 1104 aa21.29■■□□□ 1
SVOP-202ENST00000548229 FZD9O00144 591 aa21.29■■□□□ 1
SVOP-202ENST00000548229 JDP2Q8WYK2 163 aa21.29■■□□□ 1
SVOP-202ENST00000548229 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
SVOP-202ENST00000548229 ABT1Q9ULW3 272 aaKnown RBP21.29■■□□□ 1
SVOP-202ENST00000548229 IARSP41252 1262 aaKnown RBP21.28■■□□□ 1
SVOP-202ENST00000548229 ECE1P42892 770 aa21.27■■□□□ 1
SVOP-202ENST00000548229 MAP1SQ66K74 1059 aaPredicted RBP21.27■■□□□ 1
SVOP-202ENST00000548229 RNF123Q5XPI4 1314 aa21.27■□□□□ 0.99
SVOP-202ENST00000548229 CEMIPQ8WUJ3 1361 aa21.26■□□□□ 0.99
SVOP-202ENST00000548229 U2SURPO15042 1029 aaKnown RBP21.26■□□□□ 0.99
SVOP-202ENST00000548229 FAM161AQ3B820 660 aa21.26■□□□□ 0.99
SVOP-202ENST00000548229 CC2D2BQ6DHV5 1058 aa21.26■□□□□ 0.99
SVOP-202ENST00000548229 SYNE4Q8N205 404 aa21.26■□□□□ 0.99
SVOP-202ENST00000548229 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
SVOP-202ENST00000548229 LMOD1P29536 600 aaPredicted RBP21.25■□□□□ 0.99
SVOP-202ENST00000548229 EIF6P56537 245 aaKnown RBP21.25■□□□□ 0.99
SVOP-202ENST00000548229 GRIPAP1Q4V328 841 aa21.25■□□□□ 0.99
SVOP-202ENST00000548229 PSMD1Q99460 953 aa21.25■□□□□ 0.99
SVOP-202ENST00000548229 DDX21Q9NR30 783 aaKnown RBP eCLIP21.25■□□□□ 0.99
SVOP-202ENST00000548229 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
SVOP-202ENST00000548229 BCORQ6W2J9 1755 aa21.25■□□□□ 0.99
SVOP-202ENST00000548229 SIPA1L3O60292 1781 aaPredicted RBP21.24■□□□□ 0.99
SVOP-202ENST00000548229 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
SVOP-202ENST00000548229 GTF2E1P29083 439 aaPredicted RBP21.24■□□□□ 0.99
SVOP-202ENST00000548229 USP16Q9Y5T5 823 aa21.24■□□□□ 0.99
SVOP-202ENST00000548229 MLLT1Q03111 559 aaPredicted RBP21.23■□□□□ 0.99
SVOP-202ENST00000548229 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
SVOP-202ENST00000548229 CAPNS2Q96L46 248 aa21.21■□□□□ 0.99
SVOP-202ENST00000548229 GPR101Q96P66 508 aaPredicted RBP21.21■□□□□ 0.99
SVOP-202ENST00000548229 CCDC85CA6NKD9 419 aa21.2■□□□□ 0.98
SVOP-202ENST00000548229 PER1O15534 1290 aaPredicted RBP21.2■□□□□ 0.98
SVOP-202ENST00000548229 KCNQ3O43525 872 aa21.2■□□□□ 0.98
SVOP-202ENST00000548229 RGS19P49795 217 aa21.2■□□□□ 0.98
SVOP-202ENST00000548229 OLFM4Q6UX06 510 aa21.2■□□□□ 0.98
SVOP-202ENST00000548229 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
SVOP-202ENST00000548229 NYXQ9GZU5 481 aa21.2■□□□□ 0.98
SVOP-202ENST00000548229 GJA3Q9Y6H8 435 aa21.2■□□□□ 0.98
SVOP-202ENST00000548229 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
SVOP-202ENST00000548229 USP50Q70EL3 339 aaPredicted RBP21.19■□□□□ 0.98
SVOP-202ENST00000548229 RTF1Q92541 710 aaKnown RBP21.19■□□□□ 0.98
SVOP-202ENST00000548229 PCDH10Q9P2E7 1040 aa21.19■□□□□ 0.98
SVOP-202ENST00000548229 MAP2K2P36507 400 aa21.18■□□□□ 0.98
SVOP-202ENST00000548229 FAM177BA6PVY3 158 aa21.17■□□□□ 0.98
SVOP-202ENST00000548229 CA12O43570 354 aa21.17■□□□□ 0.98
SVOP-202ENST00000548229 CRY2Q49AN0 593 aa21.17■□□□□ 0.98
SVOP-202ENST00000548229 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
SVOP-202ENST00000548229 NPC1L1Q9UHC9 1359 aa21.16■□□□□ 0.98
SVOP-202ENST00000548229 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
SVOP-202ENST00000548229 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
SVOP-202ENST00000548229 LARGE2Q8N3Y3 721 aa21.15■□□□□ 0.98
SVOP-202ENST00000548229 RPGRQ92834 1020 aaKnown RBP21.15■□□□□ 0.98
SVOP-202ENST00000548229 TLL2Q9Y6L7 1015 aa21.15■□□□□ 0.98
SVOP-202ENST00000548229 PRAMEF22A3QJZ6 481 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms