RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 DZIP3Q86Y13 1208 aaKnown RBP26.86■■□□□ 1.89
GATC-202ENST00000548171 MASTLQ96GX5 879 aa26.86■■□□□ 1.89
GATC-202ENST00000548171 CFAP53Q96M91 514 aa26.86■■□□□ 1.89
GATC-202ENST00000548171 PRPF40BQ6NWY9 871 aaKnown RBP26.85■■□□□ 1.89
GATC-202ENST00000548171 TNS4Q8IZW8 715 aa26.85■■□□□ 1.89
GATC-202ENST00000548171 SCN4AP35499 1836 aa26.85■■□□□ 1.89
GATC-202ENST00000548171 PCNTO95613 3336 aa26.84■■□□□ 1.89
GATC-202ENST00000548171 PRKAR2BP31323 418 aa26.84■■□□□ 1.89
GATC-202ENST00000548171 CLEC4GQ6UXB4 293 aa26.84■■□□□ 1.89
GATC-202ENST00000548171 PHACTR3Q96KR7 559 aa26.84■■□□□ 1.89
GATC-202ENST00000548171 KCNQ3O43525 872 aa26.83■■□□□ 1.89
GATC-202ENST00000548171 CHADLQ6NUI6 762 aa26.83■■□□□ 1.89
GATC-202ENST00000548171 RSPH6AQ9H0K4 717 aa26.83■■□□□ 1.89
GATC-202ENST00000548171 ZNF652Q9Y2D9 606 aa26.83■■□□□ 1.89
GATC-202ENST00000548171 CNGB1Q14028 1251 aaPredicted RBP26.82■■□□□ 1.88
GATC-202ENST00000548171 RGL2O15211 777 aa26.81■■□□□ 1.88
GATC-202ENST00000548171 HSPA1AP0DMV8 641 aaKnown RBP26.81■■□□□ 1.88
GATC-202ENST00000548171 HSPA1BP0DMV9 641 aaKnown RBP26.81■■□□□ 1.88
GATC-202ENST00000548171 NBPF5PQ86XG9 351 aaPredicted RBP26.81■■□□□ 1.88
GATC-202ENST00000548171 NUDCQ9Y266 331 aa26.81■■□□□ 1.88
GATC-202ENST00000548171 USP16Q9Y5T5 823 aa26.81■■□□□ 1.88
GATC-202ENST00000548171 SNRPA1P09661 255 aaKnown RBP26.8■■□□□ 1.88
GATC-202ENST00000548171 CREBZFQ9NS37 354 aa26.8■■□□□ 1.88
GATC-202ENST00000548171 IQCA1LA6NCM1 817 aa26.79■■□□□ 1.88
GATC-202ENST00000548171 DDNO94850 711 aaPredicted RBP26.79■■□□□ 1.88
GATC-202ENST00000548171 RTF1Q92541 710 aaKnown RBP26.79■■□□□ 1.88
GATC-202ENST00000548171 CCDC93Q567U6 631 aa26.77■■□□□ 1.88
GATC-202ENST00000548171 C7orf43Q8WVR3 580 aa26.77■■□□□ 1.88
GATC-202ENST00000548171 KLRG2A4D1S0 409 aaPredicted RBP26.76■■□□□ 1.87
GATC-202ENST00000548171 NPR1P16066 1061 aa26.76■■□□□ 1.87
GATC-202ENST00000548171 TPTE2Q6XPS3 522 aa26.76■■□□□ 1.87
GATC-202ENST00000548171 L3MBTL3Q96JM7 780 aaPredicted RBP26.76■■□□□ 1.87
GATC-202ENST00000548171 PIP4K2AP48426 406 aaPredicted RBP26.75■■□□□ 1.87
GATC-202ENST00000548171 LAMB4A4D0S4 1761 aa26.74■■□□□ 1.87
GATC-202ENST00000548171 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
GATC-202ENST00000548171 HTATSF1O43719 755 aaKnown RBP26.74■■□□□ 1.87
GATC-202ENST00000548171 CAPN15O75808 1086 aa26.74■■□□□ 1.87
GATC-202ENST00000548171 U2AF1L5P0DN76 240 aaPredicted RBP26.73■■□□□ 1.87
GATC-202ENST00000548171 U2AF1Q01081 240 aaKnown RBP eCLIP26.73■■□□□ 1.87
GATC-202ENST00000548171 MCM10Q7L590 875 aa26.73■■□□□ 1.87
GATC-202ENST00000548171 LDHDQ86WU2 507 aa26.73■■□□□ 1.87
GATC-202ENST00000548171 POTEIP0CG38 1075 aa26.72■■□□□ 1.87
GATC-202ENST00000548171 POTEJP0CG39 1038 aa26.72■■□□□ 1.87
GATC-202ENST00000548171 FKBP4Q02790 459 aaKnown RBP eCLIP26.72■■□□□ 1.87
GATC-202ENST00000548171 NIP7Q9Y221 180 aaKnown RBP eCLIP26.72■■□□□ 1.87
GATC-202ENST00000548171 RTKN2Q8IZC4 609 aa26.71■■□□□ 1.87
GATC-202ENST00000548171 NBPF26B4DH59 902 aa26.7■■□□□ 1.86
GATC-202ENST00000548171 NBPF10Q6P3W6 841 aaKnown RBP26.7■■□□□ 1.86
GATC-202ENST00000548171 NBPF15Q8N660 670 aa26.7■■□□□ 1.86
GATC-202ENST00000548171 TAF1DQ9H5J8 278 aaPredicted RBP26.7■■□□□ 1.86
GATC-202ENST00000548171 ALDH1B1P30837 517 aa26.69■■□□□ 1.86
GATC-202ENST00000548171 MKRN1Q9UHC7 482 aaKnown RBP26.69■■□□□ 1.86
GATC-202ENST00000548171 PASKQ96RG2 1323 aa26.68■■□□□ 1.86
GATC-202ENST00000548171 NUP98P52948 1817 aa26.68■■□□□ 1.86
GATC-202ENST00000548171 PPP2R1AP30153 589 aa26.68■■□□□ 1.86
GATC-202ENST00000548171 ZNF277Q9NRM2 450 aaPredicted RBP26.67■■□□□ 1.86
GATC-202ENST00000548171 CNTNAP1P78357 1384 aa26.67■■□□□ 1.86
GATC-202ENST00000548171 DLG5Q8TDM6 1919 aa26.67■■□□□ 1.86
GATC-202ENST00000548171 ADAMTSL1Q8N6G6 1762 aa26.66■■□□□ 1.86
GATC-202ENST00000548171 TAF7Q15545 349 aaPredicted RBP26.66■■□□□ 1.86
GATC-202ENST00000548171 GTF2E1P29083 439 aaPredicted RBP26.65■■□□□ 1.86
GATC-202ENST00000548171 DCTN1Q14203 1278 aa26.65■■□□□ 1.86
GATC-202ENST00000548171 HACL1Q9UJ83 578 aa26.65■■□□□ 1.86
GATC-202ENST00000548171 KDM3BQ7LBC6 1761 aa26.65■■□□□ 1.86
GATC-202ENST00000548171 ZNF541Q9H0D2 1346 aa26.65■■□□□ 1.86
GATC-202ENST00000548171 FAM177BA6PVY3 158 aa26.63■■□□□ 1.85
GATC-202ENST00000548171 IARSP41252 1262 aaKnown RBP26.63■■□□□ 1.85
GATC-202ENST00000548171 PNMA8AQ86V59 439 aaPredicted RBP26.63■■□□□ 1.85
GATC-202ENST00000548171 NYXQ9GZU5 481 aa26.63■■□□□ 1.85
GATC-202ENST00000548171 TMEM88BA6NKF7 163 aa26.62■■□□□ 1.85
GATC-202ENST00000548171 ITGBL1O95965 494 aaPredicted RBP26.62■■□□□ 1.85
GATC-202ENST00000548171 HLFQ16534 295 aa26.62■■□□□ 1.85
GATC-202ENST00000548171 ERVV-1B6SEH8 477 aa26.61■■□□□ 1.85
GATC-202ENST00000548171 FZD9O00144 591 aa26.61■■□□□ 1.85
GATC-202ENST00000548171 EPHX2P34913 555 aa26.61■■□□□ 1.85
GATC-202ENST00000548171 CRY2Q49AN0 593 aa26.61■■□□□ 1.85
GATC-202ENST00000548171 EAPPQ56P03 285 aaPredicted RBP26.61■■□□□ 1.85
GATC-202ENST00000548171 CC2D2BQ6DHV5 1058 aa26.61■■□□□ 1.85
GATC-202ENST00000548171 OLFM4Q6UX06 510 aa26.61■■□□□ 1.85
GATC-202ENST00000548171 PNISRQ8TF01 805 aaKnown RBP26.61■■□□□ 1.85
GATC-202ENST00000548171 NEFMP07197 916 aa26.6■■□□□ 1.85
GATC-202ENST00000548171 GPC2Q8N158 579 aa26.6■■□□□ 1.85
GATC-202ENST00000548171 SYNE4Q8N205 404 aa26.6■■□□□ 1.85
GATC-202ENST00000548171 PSMD1Q99460 953 aa26.6■■□□□ 1.85
GATC-202ENST00000548171 RIC1Q4ADV7 1423 aa26.59■■□□□ 1.85
GATC-202ENST00000548171 CLEC11AQ9Y240 323 aa26.59■■□□□ 1.85
GATC-202ENST00000548171 SNED1Q8TER0 1413 aa26.58■■□□□ 1.85
GATC-202ENST00000548171 GRIPAP1Q4V328 841 aa26.58■■□□□ 1.85
GATC-202ENST00000548171 JDP2Q8WYK2 163 aa26.58■■□□□ 1.85
GATC-202ENST00000548171 IBTKQ9P2D0 1353 aaPredicted RBP26.58■■□□□ 1.84
GATC-202ENST00000548171 AIDAQ96BJ3 306 aa26.57■■□□□ 1.84
GATC-202ENST00000548171 PRDM10Q9NQV6 1147 aa26.57■■□□□ 1.84
GATC-202ENST00000548171 MIS18AQ9NYP9 233 aa26.57■■□□□ 1.84
GATC-202ENST00000548171 RNF123Q5XPI4 1314 aa26.57■■□□□ 1.84
GATC-202ENST00000548171 FOXN1O15353 648 aa26.56■■□□□ 1.84
GATC-202ENST00000548171 VEGFBP49765 207 aa26.56■■□□□ 1.84
GATC-202ENST00000548171 KIF6Q6ZMV9 814 aa26.56■■□□□ 1.84
GATC-202ENST00000548171 MAP3K15Q6ZN16 1313 aa26.56■■□□□ 1.84
GATC-202ENST00000548171 ABCC12Q96J65 1359 aa26.56■■□□□ 1.84
GATC-202ENST00000548171 HOXA10P31260 410 aaPredicted RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms