RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 KLHDC4Q8TBB5 520 aa14.47□□□□□ -0.09
RNF41-203ENST00000547967 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
RNF41-203ENST00000547967 SIL1Q9H173 461 aa14.47□□□□□ -0.09
RNF41-203ENST00000547967 HDAC5Q9UQL6 1122 aa14.47□□□□□ -0.09
RNF41-203ENST00000547967 A0A0G2JS52 829 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 UBE3BQ7Z3V4 1068 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 KIF2CQ99661 725 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 EXOC5O00471 708 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 EPHA10Q5JZY3 1008 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 ZBTB3Q9H5J0 574 aa14.46□□□□□ -0.09
RNF41-203ENST00000547967 LTBP4Q8N2S1 1624 aa14.46□□□□□ -0.1
RNF41-203ENST00000547967 UTYO14607 1347 aa14.46□□□□□ -0.1
RNF41-203ENST00000547967 HSP90AB4PQ58FF6 505 aa14.45□□□□□ -0.1
RNF41-203ENST00000547967 PLBD2Q8NHP8 589 aa14.45□□□□□ -0.1
RNF41-203ENST00000547967 ARXQ96QS3 562 aa14.45□□□□□ -0.1
RNF41-203ENST00000547967 A0A087WZG4 1122 aa14.45□□□□□ -0.1
RNF41-203ENST00000547967 STAP2Q9UGK3 403 aa14.45□□□□□ -0.1
RNF41-203ENST00000547967 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
RNF41-203ENST00000547967 USP26Q9BXU7 913 aa14.44□□□□□ -0.1
RNF41-203ENST00000547967 HSCBQ8IWL3 235 aa14.44□□□□□ -0.1
RNF41-203ENST00000547967 DNAJC10Q8IXB1 793 aa14.43□□□□□ -0.1
RNF41-203ENST00000547967 CLASRPQ8N2M8 674 aaKnown RBP14.43□□□□□ -0.1
RNF41-203ENST00000547967 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
RNF41-203ENST00000547967 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
RNF41-203ENST00000547967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.43□□□□□ -0.1
RNF41-203ENST00000547967 AHDC1Q5TGY3 1603 aaPredicted RBP14.43□□□□□ -0.1
RNF41-203ENST00000547967 G3BP1Q13283 466 aaKnown RBP eCLIP14.43□□□□□ -0.1
RNF41-203ENST00000547967 NFKBIBQ15653 356 aa14.43□□□□□ -0.1
RNF41-203ENST00000547967 KCPQ6ZWJ8 1503 aa14.43□□□□□ -0.1
RNF41-203ENST00000547967 ERC2O15083 957 aa14.42□□□□□ -0.1
RNF41-203ENST00000547967 TOM1O60784 492 aa14.42□□□□□ -0.1
RNF41-203ENST00000547967 GLI3P10071 1580 aa14.42□□□□□ -0.1
RNF41-203ENST00000547967 COL14A1Q05707 1796 aaKnown RBP14.42□□□□□ -0.1
RNF41-203ENST00000547967 CD2BP2O95400 341 aaKnown RBP14.42□□□□□ -0.1
RNF41-203ENST00000547967 PI4K2BQ8TCG2 481 aa14.42□□□□□ -0.1
RNF41-203ENST00000547967 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
RNF41-203ENST00000547967 SASH1O94885 1247 aa14.41□□□□□ -0.1
RNF41-203ENST00000547967 REC8O95072 547 aa14.41□□□□□ -0.1
RNF41-203ENST00000547967 IFIT2P09913 472 aaKnown RBP14.41□□□□□ -0.1
RNF41-203ENST00000547967 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
RNF41-203ENST00000547967 AACSQ86V21 672 aa14.41□□□□□ -0.1
RNF41-203ENST00000547967 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
RNF41-203ENST00000547967 TOGARAM1Q9Y4F4 1720 aa14.4□□□□□ -0.1
RNF41-203ENST00000547967 CHMLP26374 656 aa14.4□□□□□ -0.1
RNF41-203ENST00000547967 CHMP3Q9Y3E7 222 aa14.4□□□□□ -0.1
RNF41-203ENST00000547967 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
RNF41-203ENST00000547967 CCDC8Q9H0W5 538 aaPredicted RBP14.4□□□□□ -0.1
RNF41-203ENST00000547967 ANTXR1Q9H6X2 564 aa14.4□□□□□ -0.1
RNF41-203ENST00000547967 DISP2A7MBM2 1401 aa14.4□□□□□ -0.1
RNF41-203ENST00000547967 FRAT2O75474 233 aaPredicted RBP14.39□□□□□ -0.11
RNF41-203ENST00000547967 TNS2Q63HR2 1409 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 UBAP1LF5GYI3 381 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
RNF41-203ENST00000547967 DDB1Q16531 1140 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 ACSBG1Q96GR2 724 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 ANO2Q9NQ90 1003 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 PHLPP1O60346 1717 aa14.39□□□□□ -0.11
RNF41-203ENST00000547967 AOX1Q06278 1338 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 SPATA31A1Q5TZJ5 1347 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 EAF2Q96CJ1 260 aaPredicted RBP14.38□□□□□ -0.11
RNF41-203ENST00000547967 SLC4A9Q96Q91 983 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 CWC25Q9NXE8 425 aaPredicted RBP14.38□□□□□ -0.11
RNF41-203ENST00000547967 UBR2Q8IWV8 1755 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 STARD3NLO95772 234 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 SNX21Q969T3 373 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 LAMB4A4D0S4 1761 aa14.38□□□□□ -0.11
RNF41-203ENST00000547967 IL25Q9H293 177 aa14.37□□□□□ -0.11
RNF41-203ENST00000547967 TLR7Q9NYK1 1049 aaKnown RBP14.37□□□□□ -0.11
RNF41-203ENST00000547967 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
RNF41-203ENST00000547967 COL22A1Q8NFW1 1626 aaPredicted RBP14.37□□□□□ -0.11
RNF41-203ENST00000547967 CASP7P55210 303 aa14.37□□□□□ -0.11
RNF41-203ENST00000547967 TEX13AQ9BXU3 409 aaPredicted RBP14.37□□□□□ -0.11
RNF41-203ENST00000547967 ECHDC1Q9NTX5 307 aa14.37□□□□□ -0.11
RNF41-203ENST00000547967 AFDNP55196 1824 aaKnown RBP14.37□□□□□ -0.11
RNF41-203ENST00000547967 GLRX3O76003 335 aaKnown RBP14.36□□□□□ -0.11
RNF41-203ENST00000547967 HSP90AA1P07900 732 aaKnown RBP14.36□□□□□ -0.11
RNF41-203ENST00000547967 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
RNF41-203ENST00000547967 VSIG10Q8N0Z9 540 aa14.36□□□□□ -0.11
RNF41-203ENST00000547967 CNTROBQ8N137 903 aa14.36□□□□□ -0.11
RNF41-203ENST00000547967 BCL9O00512 1426 aa14.36□□□□□ -0.11
RNF41-203ENST00000547967 H7C1W4 665 aa14.36□□□□□ -0.11
RNF41-203ENST00000547967 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
RNF41-203ENST00000547967 PAPPAQ13219 1627 aa14.36□□□□□ -0.11
RNF41-203ENST00000547967 GPATCH3Q96I76 525 aa14.35□□□□□ -0.11
RNF41-203ENST00000547967 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
RNF41-203ENST00000547967 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
RNF41-203ENST00000547967 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
RNF41-203ENST00000547967 CCDC191Q8NCU4 936 aa14.35□□□□□ -0.11
RNF41-203ENST00000547967 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
RNF41-203ENST00000547967 ITGB4P16144 1822 aa14.35□□□□□ -0.11
RNF41-203ENST00000547967 FOXO4P98177 505 aa14.34□□□□□ -0.11
RNF41-203ENST00000547967 TFCP2Q12800 502 aa14.34□□□□□ -0.11
RNF41-203ENST00000547967 RABEP1Q15276 862 aa14.34□□□□□ -0.11
RNF41-203ENST00000547967 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
RNF41-203ENST00000547967 MARCH10Q8NA82 808 aaPredicted RBP14.34□□□□□ -0.11
RNF41-203ENST00000547967 COPRSQ9NQ92 184 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms