RNA–Protein interactions for RNA: ENST00000546619.5

CALCOCO1-204, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-204ENST00000546619 PPP2R1AP30153 589 aa20.3■□□□□ 0.84
CALCOCO1-204ENST00000546619 ERFEQ4G0M1 354 aa20.3■□□□□ 0.84
CALCOCO1-204ENST00000546619 STYK1Q6J9G0 422 aa20.3■□□□□ 0.84
CALCOCO1-204ENST00000546619 CNKSR1Q969H4 720 aa20.3■□□□□ 0.84
CALCOCO1-204ENST00000546619 BCORQ6W2J9 1755 aa20.29■□□□□ 0.84
CALCOCO1-204ENST00000546619 SRGNP10124 158 aa20.29■□□□□ 0.84
CALCOCO1-204ENST00000546619 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
CALCOCO1-204ENST00000546619 TAOK3Q9H2K8 898 aa20.29■□□□□ 0.84
CALCOCO1-204ENST00000546619 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
CALCOCO1-204ENST00000546619 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
CALCOCO1-204ENST00000546619 NBPF5PQ86XG9 351 aaPredicted RBP20.28■□□□□ 0.84
CALCOCO1-204ENST00000546619 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
CALCOCO1-204ENST00000546619 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
CALCOCO1-204ENST00000546619 POTECB2RU33 542 aa20.27■□□□□ 0.84
CALCOCO1-204ENST00000546619 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
CALCOCO1-204ENST00000546619 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
CALCOCO1-204ENST00000546619 FER1L6Q2WGJ9 1857 aa20.26■□□□□ 0.83
CALCOCO1-204ENST00000546619 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
CALCOCO1-204ENST00000546619 SLX4Q8IY92 1834 aa20.25■□□□□ 0.83
CALCOCO1-204ENST00000546619 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
CALCOCO1-204ENST00000546619 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
CALCOCO1-204ENST00000546619 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
CALCOCO1-204ENST00000546619 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
CALCOCO1-204ENST00000546619 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
CALCOCO1-204ENST00000546619 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
CALCOCO1-204ENST00000546619 DDNO94850 711 aaPredicted RBP20.22■□□□□ 0.83
CALCOCO1-204ENST00000546619 NPR1P16066 1061 aa20.22■□□□□ 0.83
CALCOCO1-204ENST00000546619 TAF7Q15545 349 aaPredicted RBP20.22■□□□□ 0.83
CALCOCO1-204ENST00000546619 TPTE2Q6XPS3 522 aa20.22■□□□□ 0.83
CALCOCO1-204ENST00000546619 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
CALCOCO1-204ENST00000546619 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
CALCOCO1-204ENST00000546619 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
CALCOCO1-204ENST00000546619 RGL2O15211 777 aa20.21■□□□□ 0.83
CALCOCO1-204ENST00000546619 CCDC93Q567U6 631 aa20.21■□□□□ 0.83
CALCOCO1-204ENST00000546619 COL13A1Q5TAT6 717 aaPredicted RBP20.21■□□□□ 0.83
CALCOCO1-204ENST00000546619 PCNTO95613 3336 aa20.2■□□□□ 0.82
CALCOCO1-204ENST00000546619 C7orf43Q8WVR3 580 aa20.2■□□□□ 0.82
CALCOCO1-204ENST00000546619 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
CALCOCO1-204ENST00000546619 NEFMP07197 916 aa20.19■□□□□ 0.82
CALCOCO1-204ENST00000546619 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
CALCOCO1-204ENST00000546619 KLRG2A4D1S0 409 aaPredicted RBP20.18■□□□□ 0.82
CALCOCO1-204ENST00000546619 GTF2E1P29083 439 aaPredicted RBP20.18■□□□□ 0.82
CALCOCO1-204ENST00000546619 POTEIP0CG38 1075 aa20.17■□□□□ 0.82
CALCOCO1-204ENST00000546619 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
CALCOCO1-204ENST00000546619 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
CALCOCO1-204ENST00000546619 HLFQ16534 295 aa20.17■□□□□ 0.82
CALCOCO1-204ENST00000546619 IQCA1LA6NCM1 817 aa20.16■□□□□ 0.82
CALCOCO1-204ENST00000546619 OLFM4Q6UX06 510 aa20.16■□□□□ 0.82
CALCOCO1-204ENST00000546619 NGEFQ8N5V2 710 aa20.16■□□□□ 0.82
CALCOCO1-204ENST00000546619 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
CALCOCO1-204ENST00000546619 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
CALCOCO1-204ENST00000546619 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
CALCOCO1-204ENST00000546619 HSPA1AP0DMV8 641 aaKnown RBP20.15■□□□□ 0.82
CALCOCO1-204ENST00000546619 HSPA1BP0DMV9 641 aaKnown RBP20.15■□□□□ 0.82
CALCOCO1-204ENST00000546619 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
CALCOCO1-204ENST00000546619 L3MBTL3Q96JM7 780 aaPredicted RBP20.14■□□□□ 0.81
CALCOCO1-204ENST00000546619 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
CALCOCO1-204ENST00000546619 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
CALCOCO1-204ENST00000546619 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
CALCOCO1-204ENST00000546619 TNS4Q8IZW8 715 aa20.13■□□□□ 0.81
CALCOCO1-204ENST00000546619 NYXQ9GZU5 481 aa20.13■□□□□ 0.81
CALCOCO1-204ENST00000546619 TAF1DQ9H5J8 278 aaPredicted RBP20.13■□□□□ 0.81
CALCOCO1-204ENST00000546619 RRP7AQ9Y3A4 280 aaKnown RBP20.13■□□□□ 0.81
CALCOCO1-204ENST00000546619 ABCC12Q96J65 1359 aa20.12■□□□□ 0.81
CALCOCO1-204ENST00000546619 KIF6Q6ZMV9 814 aa20.12■□□□□ 0.81
CALCOCO1-204ENST00000546619 LDHDQ86WU2 507 aa20.12■□□□□ 0.81
CALCOCO1-204ENST00000546619 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
CALCOCO1-204ENST00000546619 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 MAP3K15Q6ZN16 1313 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 ERVV-1B6SEH8 477 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 MYL6BP14649 208 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 NUTM1Q86Y26 1132 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
CALCOCO1-204ENST00000546619 CAPN15O75808 1086 aa20.1■□□□□ 0.81
CALCOCO1-204ENST00000546619 IARSP41252 1262 aaKnown RBP20.1■□□□□ 0.81
CALCOCO1-204ENST00000546619 CRY2Q49AN0 593 aa20.1■□□□□ 0.81
CALCOCO1-204ENST00000546619 EAPPQ56P03 285 aaPredicted RBP20.1■□□□□ 0.81
CALCOCO1-204ENST00000546619 TTLL7Q6ZT98 887 aa20.1■□□□□ 0.81
CALCOCO1-204ENST00000546619 MAPK8IP3Q9UPT6 1336 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 GPTP24298 496 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 SYNE4Q8N205 404 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 ZBTB3Q9H5J0 574 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 HACL1Q9UJ83 578 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 DLG5Q8TDM6 1919 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 SCN4AP35499 1836 aa20.09■□□□□ 0.81
CALCOCO1-204ENST00000546619 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
CALCOCO1-204ENST00000546619 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
CALCOCO1-204ENST00000546619 EPHX2P34913 555 aa20.07■□□□□ 0.8
CALCOCO1-204ENST00000546619 PSMD1Q99460 953 aa20.07■□□□□ 0.8
CALCOCO1-204ENST00000546619 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
CALCOCO1-204ENST00000546619 CLEC11AQ9Y240 323 aa20.07■□□□□ 0.8
CALCOCO1-204ENST00000546619 IBTKQ9P2D0 1353 aaPredicted RBP20.07■□□□□ 0.8
CALCOCO1-204ENST00000546619 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
CALCOCO1-204ENST00000546619 UBN2Q6ZU65 1347 aa20.06■□□□□ 0.8
CALCOCO1-204ENST00000546619 FZD9O00144 591 aa20.06■□□□□ 0.8
CALCOCO1-204ENST00000546619 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
CALCOCO1-204ENST00000546619 JDP2Q8WYK2 163 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms