RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 RPGRQ92834 1020 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 CENPTQ96BT3 561 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 VMP1Q96GC9 406 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 SLC39A13Q96H72 371 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZNF496Q96IT1 587 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 SPAG5Q96R06 1193 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 UIMC1Q96RL1 719 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 SLC26A8Q96RN1 970 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 KIF2CQ99661 725 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 SLX1AQ9BQ83 275 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 TINF2Q9BSI4 451 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 MMTAG2Q9BU76 263 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 XPO4Q9C0E2 1151 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZNF700Q9H0M5 742 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 RBSNQ9H1K0 784 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 RWDD1Q9H446 243 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 DEF6Q9H4E7 631 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZSWIM4Q9H7M6 989 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 AS3MTQ9HBK9 375 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 LGR6Q9HBX8 967 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 CLIC5Q9NZA1 410 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 ZMAT5Q9UDW3 170 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 PRKAG2Q9UGJ0 569 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 STAG3Q9UJ98 1225 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 DDX41Q9UJV9 622 aaKnown RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 RABL2BQ9UNT1 228 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 IQSEC3Q9UPP2 1182 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 ATF5Q9Y2D1 282 aaPredicted RBP2.34□□□□□ -2.03
CFTR-207ENST00000546407 SLC45A1Q9Y2W3 748 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 PCDHGA4Q9Y5G9 962 aa2.34□□□□□ -2.03
CFTR-207ENST00000546407 GTPBP10A4D1E9 387 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 ERICH4A6NGS2 130 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 H0YHG0 523 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 ENPP3O14638 875 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 TBX3O15119 743 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 PER1O15534 1290 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 ORC4O43929 436 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 DIAPH1O60610 1272 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 KIAA0754O94854 1291 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 KRT18P05783 430 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 C7P10643 843 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 NAT2P11245 290 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 CAPN2P17655 700 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 RRM1P23921 792 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 ALDH1B1P30837 517 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 GTF2F1P35269 517 aaKnown RBP eCLIP2.33□□□□□ -2.04
CFTR-207ENST00000546407 GTF2A1P52655 376 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 RBL2Q08999 1139 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 CCDC15Q0P6D6 951 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 CHAF1AQ13111 956 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 PTK7Q13308 1070 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 BMS1Q14692 1282 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 WTAPQ15007 396 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 EP400NLQ6ZTU2 488 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 NYAP1Q6ZVC0 841 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 HDGFL2Q7Z4V5 671 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 C11orf74Q86VG3 221 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 LRRC49Q8IUZ0 686 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 CCDC144CPQ8IYA2 1237 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 ELOA2Q8IYF1 753 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 TEX9Q8N6V9 391 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 APPL2Q8NEU8 664 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 RTF1Q92541 710 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 TSC1Q92574 1164 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 TRIM52Q96A61 297 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 ZNF594Q96JF6 807 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 TIGD1Q96MW7 591 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 GBP4Q96PP9 640 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 GSDMAQ96QA5 445 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 FAM167BQ9BTA0 163 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 UTP14AQ9BVJ6 771 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 MAK16Q9BXY0 300 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 TRIM6Q9C030 488 aaPredicted RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 OSBPL2Q9H1P3 480 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 RMI1Q9H9A7 625 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 VEZTQ9HBM0 779 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 EXOC1Q9NV70 894 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 QPCTLQ9NXS2 382 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 TMOD4Q9NZQ9 345 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 CWC15Q9P013 229 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 CALCOCO1Q9P1Z2 691 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 EPS15L1Q9UBC2 864 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 DKK3Q9UBP4 350 aa2.33□□□□□ -2.04
CFTR-207ENST00000546407 MKRN1Q9UHC7 482 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 DMGDHQ9UI17 866 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 TTF2Q9UNY4 1162 aaKnown RBP2.33□□□□□ -2.04
CFTR-207ENST00000546407 CARNS1A5YM72 827 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 F8VZ95 297 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 CPLX1O14810 134 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 MTRF1O75570 445 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 CDKL5O76039 1030 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 RAPGEF3O95398 923 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 BAG4O95429 457 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 MYL1P05976 194 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 MYL3P08590 195 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 HARSP12081 509 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 XRCC5P13010 732 aaKnown RBP2.32□□□□□ -2.04
CFTR-207ENST00000546407 XBP1P17861 261 aa2.32□□□□□ -2.04
CFTR-207ENST00000546407 CCNCP24863 283 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms