RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 IQSEC3Q9UPP2 1182 aaPredicted RBP13.95□□□□□ -0.18
CHERP-203ENST00000546361 MRPL50Q8N5N7 158 aaKnown RBP13.95□□□□□ -0.18
CHERP-203ENST00000546361 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
CHERP-203ENST00000546361 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
CHERP-203ENST00000546361 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
CHERP-203ENST00000546361 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
CHERP-203ENST00000546361 ARID3AQ99856 593 aa13.95□□□□□ -0.18
CHERP-203ENST00000546361 CWF19L2Q2TBE0 894 aaKnown RBP13.94□□□□□ -0.18
CHERP-203ENST00000546361 FERMT3Q86UX7 667 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 ZHX3Q9H4I2 956 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 EPS15P42566 896 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 TTF1Q15361 905 aaPredicted RBP13.94□□□□□ -0.18
CHERP-203ENST00000546361 TMEM132AQ24JP5 1023 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
CHERP-203ENST00000546361 PCDHB15Q9Y5E8 787 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 IGHDP01880 384 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 CTCFLQ8NI51 663 aaPredicted RBP13.94□□□□□ -0.18
CHERP-203ENST00000546361 ZNF592Q92610 1267 aa13.94□□□□□ -0.18
CHERP-203ENST00000546361 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHERP-203ENST00000546361 ZNF790Q6PG37 636 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 RNF41Q9H4P4 317 aaPredicted RBP13.93□□□□□ -0.18
CHERP-203ENST00000546361 CCDC196A0A1B0GTZ2 297 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 BAG3O95817 575 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 IL13P35225 146 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 ANKRD44Q8N8A2 993 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 EDC4Q6P2E9 1401 aaKnown RBP13.93□□□□□ -0.18
CHERP-203ENST00000546361 CCDC83Q8IWF9 413 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 UTP14AQ9BVJ6 771 aaKnown RBP13.93□□□□□ -0.18
CHERP-203ENST00000546361 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 UQCRFS1P1P0C7P4 283 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
CHERP-203ENST00000546361 WASF1Q92558 559 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 PRM3Q9NNZ6 103 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 ZFYVE16Q7Z3T8 1539 aa13.93□□□□□ -0.18
CHERP-203ENST00000546361 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHERP-203ENST00000546361 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
CHERP-203ENST00000546361 EIF2AK4Q9P2K8 1649 aaKnown RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
CHERP-203ENST00000546361 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 BMP2KLQ5H9B9 411 aa13.92□□□□□ -0.18
CHERP-203ENST00000546361 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
CHERP-203ENST00000546361 NSFL1CQ9UNZ2 370 aaKnown RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 A0A0U1RQG5 324 aaPredicted RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 ZNF76P36508 570 aa13.92□□□□□ -0.18
CHERP-203ENST00000546361 PRIM1P49642 420 aaKnown RBP13.92□□□□□ -0.18
CHERP-203ENST00000546361 ATP8B2P98198 1209 aa13.92□□□□□ -0.18
CHERP-203ENST00000546361 SPTY2D1Q68D10 685 aaPredicted RBP13.91□□□□□ -0.18
CHERP-203ENST00000546361 TRIM5Q9C035 493 aa13.91□□□□□ -0.18
CHERP-203ENST00000546361 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
CHERP-203ENST00000546361 GNPATO15228 680 aa13.91□□□□□ -0.18
CHERP-203ENST00000546361 HAND2P61296 217 aa13.91□□□□□ -0.18
CHERP-203ENST00000546361 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
CHERP-203ENST00000546361 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
CHERP-203ENST00000546361 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
CHERP-203ENST00000546361 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
CHERP-203ENST00000546361 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
CHERP-203ENST00000546361 IRS4O14654 1257 aaPredicted RBP13.9□□□□□ -0.18
CHERP-203ENST00000546361 NBPF14Q5TI25 921 aa13.9□□□□□ -0.18
CHERP-203ENST00000546361 PDILTQ8N807 584 aa13.9□□□□□ -0.18
CHERP-203ENST00000546361 HELBQ8NG08 1087 aaPredicted RBP13.9□□□□□ -0.18
CHERP-203ENST00000546361 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
CHERP-203ENST00000546361 ZC3H12CQ9C0D7 883 aaKnown RBP13.9□□□□□ -0.18
CHERP-203ENST00000546361 FAM13BQ9NYF5 915 aa13.9□□□□□ -0.18
CHERP-203ENST00000546361 MAST1Q9Y2H9 1570 aa13.9□□□□□ -0.18
CHERP-203ENST00000546361 ARHGEF10O15013 1369 aa13.9□□□□□ -0.18
CHERP-203ENST00000546361 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.19
CHERP-203ENST00000546361 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.19
CHERP-203ENST00000546361 NYXQ9GZU5 481 aa13.9□□□□□ -0.19
CHERP-203ENST00000546361 SEC63Q9UGP8 760 aaKnown RBP13.9□□□□□ -0.19
CHERP-203ENST00000546361 TNNQ9UQP3 1299 aa13.9□□□□□ -0.19
CHERP-203ENST00000546361 PLEKHH1Q9ULM0 1364 aa13.89□□□□□ -0.19
CHERP-203ENST00000546361 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
CHERP-203ENST00000546361 CT47A1Q5JQC4 288 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
CHERP-203ENST00000546361 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
CHERP-203ENST00000546361 NASPP49321 788 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
CHERP-203ENST00000546361 TRAPPC3LQ5T215 181 aa13.89□□□□□ -0.19
CHERP-203ENST00000546361 TMEM94Q12767 1356 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 LARP6Q9BRS8 491 aaKnown RBP13.88□□□□□ -0.19
CHERP-203ENST00000546361 USP21Q9UK80 565 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 COL17A1Q9UMD9 1497 aaPredicted RBP13.88□□□□□ -0.19
CHERP-203ENST00000546361 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 PDE1AP54750 535 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 FILIP1LQ4L180 1135 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 WDHD1O75717 1129 aaPredicted RBP13.88□□□□□ -0.19
CHERP-203ENST00000546361 A1BGP04217 495 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 FAM89AQ96GI7 184 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 FEZ1Q99689 392 aa13.88□□□□□ -0.19
CHERP-203ENST00000546361 TNMDQ9H2S6 317 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms