RNA–Protein interactions for RNA: ENST00000546340.1

AL662844.1-201, humanhuman

BASIC

Gene AL662844.1, Length 181 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662844.1-201ENST00000546340 NEFMP07197 916 aa23.3■■□□□ 1.32
AL662844.1-201ENST00000546340 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
AL662844.1-201ENST00000546340 PRELPP51888 382 aa23.29■■□□□ 1.32
AL662844.1-201ENST00000546340 FER1L6Q2WGJ9 1857 aa23.29■■□□□ 1.32
AL662844.1-201ENST00000546340 MASTLQ96GX5 879 aa23.29■■□□□ 1.32
AL662844.1-201ENST00000546340 DICER1Q9UPY3 1922 aaKnown RBP23.29■■□□□ 1.32
AL662844.1-201ENST00000546340 COL11A2P13942 1736 aaPredicted RBP23.28■■□□□ 1.32
AL662844.1-201ENST00000546340 C21orf2O43822 256 aa23.28■■□□□ 1.32
AL662844.1-201ENST00000546340 SRGNP10124 158 aa23.28■■□□□ 1.32
AL662844.1-201ENST00000546340 MCM10Q7L590 875 aa23.28■■□□□ 1.32
AL662844.1-201ENST00000546340 TAOK3Q9H2K8 898 aa23.28■■□□□ 1.32
AL662844.1-201ENST00000546340 ERFEQ4G0M1 354 aa23.27■■□□□ 1.32
AL662844.1-201ENST00000546340 NBPF5PQ86XG9 351 aaPredicted RBP23.27■■□□□ 1.32
AL662844.1-201ENST00000546340 JMYQ8N9B5 988 aa23.27■■□□□ 1.32
AL662844.1-201ENST00000546340 TAF7Q15545 349 aaPredicted RBP23.26■■□□□ 1.31
AL662844.1-201ENST00000546340 ARFGEF2Q9Y6D5 1785 aa23.26■■□□□ 1.31
AL662844.1-201ENST00000546340 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
AL662844.1-201ENST00000546340 PNISRQ8TF01 805 aaKnown RBP23.25■■□□□ 1.31
AL662844.1-201ENST00000546340 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
AL662844.1-201ENST00000546340 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
AL662844.1-201ENST00000546340 NPR1P16066 1061 aa23.23■■□□□ 1.31
AL662844.1-201ENST00000546340 KLRG2A4D1S0 409 aaPredicted RBP23.22■■□□□ 1.31
AL662844.1-201ENST00000546340 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
AL662844.1-201ENST00000546340 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
AL662844.1-201ENST00000546340 SLX4Q8IY92 1834 aa23.22■■□□□ 1.31
AL662844.1-201ENST00000546340 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
AL662844.1-201ENST00000546340 PIP4K2AP48426 406 aaPredicted RBP23.2■■□□□ 1.3
AL662844.1-201ENST00000546340 HTRA3P83110 453 aa23.2■■□□□ 1.3
AL662844.1-201ENST00000546340 DCTN1Q14203 1278 aa23.2■■□□□ 1.3
AL662844.1-201ENST00000546340 NIP7Q9Y221 180 aaKnown RBP eCLIP23.2■■□□□ 1.3
AL662844.1-201ENST00000546340 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
AL662844.1-201ENST00000546340 NBPF26B4DH59 902 aa23.19■■□□□ 1.3
AL662844.1-201ENST00000546340 CCDC93Q567U6 631 aa23.19■■□□□ 1.3
AL662844.1-201ENST00000546340 NBPF10Q6P3W6 841 aaKnown RBP23.19■■□□□ 1.3
AL662844.1-201ENST00000546340 NBPF15Q8N660 670 aa23.19■■□□□ 1.3
AL662844.1-201ENST00000546340 CACNA1SQ13698 1873 aa23.18■■□□□ 1.3
AL662844.1-201ENST00000546340 POTECB2RU33 542 aa23.18■■□□□ 1.3
AL662844.1-201ENST00000546340 ALDH1B1P30837 517 aa23.17■■□□□ 1.3
AL662844.1-201ENST00000546340 C7orf43Q8WVR3 580 aa23.17■■□□□ 1.3
AL662844.1-201ENST00000546340 PCNTO95613 3336 aa23.16■■□□□ 1.3
AL662844.1-201ENST00000546340 IQCA1LA6NCM1 817 aa23.16■■□□□ 1.3
AL662844.1-201ENST00000546340 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
AL662844.1-201ENST00000546340 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
AL662844.1-201ENST00000546340 RTKN2Q8IZC4 609 aa23.16■■□□□ 1.3
AL662844.1-201ENST00000546340 NYXQ9GZU5 481 aa23.16■■□□□ 1.3
AL662844.1-201ENST00000546340 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.3
AL662844.1-201ENST00000546340 FKBP4Q02790 459 aaKnown RBP eCLIP23.14■■□□□ 1.29
AL662844.1-201ENST00000546340 CHADLQ6NUI6 762 aa23.14■■□□□ 1.29
AL662844.1-201ENST00000546340 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
AL662844.1-201ENST00000546340 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
AL662844.1-201ENST00000546340 KIF6Q6ZMV9 814 aa23.13■■□□□ 1.29
AL662844.1-201ENST00000546340 L3MBTL3Q96JM7 780 aaPredicted RBP23.13■■□□□ 1.29
AL662844.1-201ENST00000546340 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
AL662844.1-201ENST00000546340 SCN4AP35499 1836 aa23.12■■□□□ 1.29
AL662844.1-201ENST00000546340 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
AL662844.1-201ENST00000546340 DDNO94850 711 aaPredicted RBP23.12■■□□□ 1.29
AL662844.1-201ENST00000546340 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
AL662844.1-201ENST00000546340 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
AL662844.1-201ENST00000546340 HLFQ16534 295 aa23.11■■□□□ 1.29
AL662844.1-201ENST00000546340 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
AL662844.1-201ENST00000546340 IBTKQ9P2D0 1353 aaPredicted RBP23.11■■□□□ 1.29
AL662844.1-201ENST00000546340 ERBB4Q15303 1308 aa23.1■■□□□ 1.29
AL662844.1-201ENST00000546340 MAP3K15Q6ZN16 1313 aa23.1■■□□□ 1.29
AL662844.1-201ENST00000546340 CC2D2BQ6DHV5 1058 aa23.1■■□□□ 1.29
AL662844.1-201ENST00000546340 CRY2Q49AN0 593 aa23.09■■□□□ 1.29
AL662844.1-201ENST00000546340 LDHDQ86WU2 507 aa23.09■■□□□ 1.29
AL662844.1-201ENST00000546340 CREBZFQ9NS37 354 aa23.09■■□□□ 1.29
AL662844.1-201ENST00000546340 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.29
AL662844.1-201ENST00000546340 NUP98P52948 1817 aa23.08■■□□□ 1.29
AL662844.1-201ENST00000546340 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
AL662844.1-201ENST00000546340 PSMD1Q99460 953 aa23.07■■□□□ 1.28
AL662844.1-201ENST00000546340 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
AL662844.1-201ENST00000546340 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
AL662844.1-201ENST00000546340 ZNF277Q9NRM2 450 aaPredicted RBP23.06■■□□□ 1.28
AL662844.1-201ENST00000546340 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
AL662844.1-201ENST00000546340 IARSP41252 1262 aaKnown RBP23.05■■□□□ 1.28
AL662844.1-201ENST00000546340 RPGRQ92834 1020 aaKnown RBP23.05■■□□□ 1.28
AL662844.1-201ENST00000546340 TAF1DQ9H5J8 278 aaPredicted RBP23.05■■□□□ 1.28
AL662844.1-201ENST00000546340 HOXA10P31260 410 aaPredicted RBP23.04■■□□□ 1.28
AL662844.1-201ENST00000546340 SYNE4Q8N205 404 aa23.04■■□□□ 1.28
AL662844.1-201ENST00000546340 JDP2Q8WYK2 163 aa23.04■■□□□ 1.28
AL662844.1-201ENST00000546340 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
AL662844.1-201ENST00000546340 FZD9O00144 591 aa23.03■■□□□ 1.28
AL662844.1-201ENST00000546340 MYL6BP14649 208 aa23.03■■□□□ 1.28
AL662844.1-201ENST00000546340 LMOD3Q0VAK6 560 aa23.03■■□□□ 1.28
AL662844.1-201ENST00000546340 RALBP1Q15311 655 aa23.03■■□□□ 1.28
AL662844.1-201ENST00000546340 TTLL7Q6ZT98 887 aa23.03■■□□□ 1.28
AL662844.1-201ENST00000546340 PNMA8AQ86V59 439 aaPredicted RBP23.03■■□□□ 1.28
AL662844.1-201ENST00000546340 PARP10Q53GL7 1025 aa23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 COL13A1Q5TAT6 717 aaPredicted RBP23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 GIGYF2Q6Y7W6 1299 aaKnown RBP23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 PPP1R42Q7Z4L9 355 aa23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 NUTM1Q86Y26 1132 aa23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 ZNF34Q8IZ26 560 aa23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 TSPYL4Q9UJ04 414 aa23.02■■□□□ 1.28
AL662844.1-201ENST00000546340 ABCC12Q96J65 1359 aa23.01■■□□□ 1.27
AL662844.1-201ENST00000546340 HSPA1AP0DMV8 641 aaKnown RBP23.01■■□□□ 1.27
AL662844.1-201ENST00000546340 HSPA1BP0DMV9 641 aaKnown RBP23.01■■□□□ 1.27
AL662844.1-201ENST00000546340 GPC2Q8N158 579 aa23.01■■□□□ 1.27
AL662844.1-201ENST00000546340 RBM17Q96I25 401 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms