RNA–Protein interactions for RNA: ENST00000546284.1

AP002840.1-201, humanhuman

TSL 3 BASIC

Gene AP002840.1, Length 524 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002840.1-201ENST00000546284 RFC4P35249 363 aa12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 KIF6Q6ZMV9 814 aa12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 NARFQ9UHQ1 456 aa12.66□□□□□ -0.38
AP002840.1-201ENST00000546284 PTPRCP08575 1304 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 MSH5O43196 834 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 ZPR1O75312 459 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 HLFQ16534 295 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 ARFGEF2Q9Y6D5 1785 aa12.65□□□□□ -0.38
AP002840.1-201ENST00000546284 PI4KAP2A4QPH2 592 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 ERVV-1B6SEH8 477 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 F6X3S4 739 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 KSR2Q6VAB6 950 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 PI4KAP1Q8N8J0 262 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
AP002840.1-201ENST00000546284 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
AP002840.1-201ENST00000546284 GYS1P13807 737 aa12.63□□□□□ -0.39
AP002840.1-201ENST00000546284 TRIM27P14373 513 aa12.63□□□□□ -0.39
AP002840.1-201ENST00000546284 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
AP002840.1-201ENST00000546284 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
AP002840.1-201ENST00000546284 NUP98P52948 1817 aa12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 PLIN1O60240 522 aa12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 FKBP8Q14318 412 aa12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 ZKSCAN2Q63HK3 967 aa12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 DNAAF4Q8WXU2 420 aa12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 ARHGAP45Q92619 1136 aa12.62□□□□□ -0.39
AP002840.1-201ENST00000546284 RGL2O15211 777 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 SLC4A10Q6U841 1118 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 MYD88Q99836 296 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 METTL22Q9BUU2 404 aaPredicted RBP12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 ZNF652Q9Y2D9 606 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 ABCC4O15439 1325 aa12.61□□□□□ -0.39
AP002840.1-201ENST00000546284 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 GPTP24298 496 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 TCIRG1Q13488 830 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 TBC1D9BQ66K14 1250 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 CLUAP1Q96AJ1 413 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 RNF123Q5XPI4 1314 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 UBN2Q6ZU65 1347 aa12.6□□□□□ -0.39
AP002840.1-201ENST00000546284 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 ZBTB7AO95365 584 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 IGKV5-2P06315 115 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 RLBP1P12271 317 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 NFIXQ14938 502 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 HSP90AB3PQ58FF7 597 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 BEND3Q5T5X7 828 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 BICDL1Q6ZP65 573 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
AP002840.1-201ENST00000546284 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 C20orf194Q5TEA3 1177 aa12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 FTSJ3Q8IY81 847 aaKnown RBP12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 LINS1Q8NG48 757 aa12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 PANK1Q8TE04 598 aa12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
AP002840.1-201ENST00000546284 COL24A1Q17RW2 1714 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 NEURL1BA8MQ27 555 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 TM4SF1P30408 202 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 DDR1Q08345 913 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
AP002840.1-201ENST00000546284 CARMIL3Q8ND23 1372 aa12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 MMP10P09238 476 aa12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 CCT4P50991 539 aaKnown RBP12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 TRIM28Q13263 835 aaKnown RBP12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
AP002840.1-201ENST00000546284 FAM177BA6PVY3 158 aa12.55□□□□□ -0.4
AP002840.1-201ENST00000546284 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms