RNA–Protein interactions for RNA: ENST00000546062.1

LINC02405-203, Transcript of long intergenic non-protein coding RNA 2405, humanhuman

TSL 3

Gene LINC02405, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02405-203ENST00000546062 ANP32CO43423 234 aa11.33□□□□□ -0.6
LINC02405-203ENST00000546062 PRELPP51888 382 aa11.33□□□□□ -0.6
LINC02405-203ENST00000546062 RIPK4P57078 832 aa11.33□□□□□ -0.6
LINC02405-203ENST00000546062 TAF7Q15545 349 aaPredicted RBP11.33□□□□□ -0.6
LINC02405-203ENST00000546062 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
LINC02405-203ENST00000546062 PNISRQ8TF01 805 aaKnown RBP11.33□□□□□ -0.6
LINC02405-203ENST00000546062 MIS18AQ9NYP9 233 aa11.33□□□□□ -0.6
LINC02405-203ENST00000546062 PDZRN3Q9UPQ7 1066 aa11.33□□□□□ -0.6
LINC02405-203ENST00000546062 PRAMEF22A3QJZ6 481 aa11.32□□□□□ -0.6
LINC02405-203ENST00000546062 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
LINC02405-203ENST00000546062 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
LINC02405-203ENST00000546062 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
LINC02405-203ENST00000546062 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
LINC02405-203ENST00000546062 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
LINC02405-203ENST00000546062 ZC3H4Q9UPT8 1303 aaKnown RBP11.32□□□□□ -0.6
LINC02405-203ENST00000546062 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
LINC02405-203ENST00000546062 RUNDC1Q96C34 613 aa11.31□□□□□ -0.6
LINC02405-203ENST00000546062 TAOK3Q9H2K8 898 aa11.31□□□□□ -0.6
LINC02405-203ENST00000546062 TSPYL4Q9UJ04 414 aa11.31□□□□□ -0.6
LINC02405-203ENST00000546062 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
LINC02405-203ENST00000546062 ZNF652Q9Y2D9 606 aa11.31□□□□□ -0.6
LINC02405-203ENST00000546062 STYK1Q6J9G0 422 aa11.3□□□□□ -0.6
LINC02405-203ENST00000546062 PRPF40BQ6NWY9 871 aaKnown RBP11.3□□□□□ -0.6
LINC02405-203ENST00000546062 TPTE2Q6XPS3 522 aa11.3□□□□□ -0.6
LINC02405-203ENST00000546062 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
LINC02405-203ENST00000546062 NIP7Q9Y221 180 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC02405-203ENST00000546062 LAS1LQ9Y4W2 734 aaKnown RBP11.3□□□□□ -0.6
LINC02405-203ENST00000546062 UBR2Q8IWV8 1755 aa11.3□□□□□ -0.6
LINC02405-203ENST00000546062 CAPN15O75808 1086 aa11.29□□□□□ -0.6
LINC02405-203ENST00000546062 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
LINC02405-203ENST00000546062 SRGNP10124 158 aa11.29□□□□□ -0.6
LINC02405-203ENST00000546062 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
LINC02405-203ENST00000546062 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
LINC02405-203ENST00000546062 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
LINC02405-203ENST00000546062 CLEC4GQ6UXB4 293 aa11.28□□□□□ -0.6
LINC02405-203ENST00000546062 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
LINC02405-203ENST00000546062 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
LINC02405-203ENST00000546062 POTECB2RU33 542 aa11.27□□□□□ -0.61
LINC02405-203ENST00000546062 NPR1P16066 1061 aa11.27□□□□□ -0.61
LINC02405-203ENST00000546062 JMYQ8N9B5 988 aa11.27□□□□□ -0.61
LINC02405-203ENST00000546062 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
LINC02405-203ENST00000546062 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
LINC02405-203ENST00000546062 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
LINC02405-203ENST00000546062 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
LINC02405-203ENST00000546062 HLFQ16534 295 aa11.26□□□□□ -0.61
LINC02405-203ENST00000546062 CCDC93Q567U6 631 aa11.26□□□□□ -0.61
LINC02405-203ENST00000546062 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
LINC02405-203ENST00000546062 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
LINC02405-203ENST00000546062 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
LINC02405-203ENST00000546062 ZNF277Q9NRM2 450 aaPredicted RBP11.26□□□□□ -0.61
LINC02405-203ENST00000546062 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
LINC02405-203ENST00000546062 PCNTO95613 3336 aa11.25□□□□□ -0.61
LINC02405-203ENST00000546062 APAF1O14727 1248 aa11.25□□□□□ -0.61
LINC02405-203ENST00000546062 MYL6BP14649 208 aa11.25□□□□□ -0.61
LINC02405-203ENST00000546062 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
LINC02405-203ENST00000546062 OLFM4Q6UX06 510 aa11.25□□□□□ -0.61
LINC02405-203ENST00000546062 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
LINC02405-203ENST00000546062 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
LINC02405-203ENST00000546062 IQCA1LA6NCM1 817 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 TCERG1O14776 1098 aaKnown RBP11.24□□□□□ -0.61
LINC02405-203ENST00000546062 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 EIF2S2P20042 333 aaKnown RBP11.24□□□□□ -0.61
LINC02405-203ENST00000546062 ALDH1B1P30837 517 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 KIF6Q6ZMV9 814 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 RTKN2Q8IZC4 609 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 LTBP3Q9NS15 1303 aa11.24□□□□□ -0.61
LINC02405-203ENST00000546062 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
LINC02405-203ENST00000546062 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
LINC02405-203ENST00000546062 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
LINC02405-203ENST00000546062 GPTP24298 496 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC02405-203ENST00000546062 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
LINC02405-203ENST00000546062 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
LINC02405-203ENST00000546062 SCN7AQ01118 1682 aa11.22□□□□□ -0.61
LINC02405-203ENST00000546062 JDP2Q8WYK2 163 aa11.22□□□□□ -0.61
LINC02405-203ENST00000546062 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
LINC02405-203ENST00000546062 NYXQ9GZU5 481 aa11.22□□□□□ -0.61
LINC02405-203ENST00000546062 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
LINC02405-203ENST00000546062 BABAM1Q9NWV8 329 aa11.22□□□□□ -0.61
LINC02405-203ENST00000546062 DLG5Q8TDM6 1919 aa11.21□□□□□ -0.61
LINC02405-203ENST00000546062 NRXN2Q9P2S2 1712 aa11.21□□□□□ -0.61
LINC02405-203ENST00000546062 TTLL7Q6ZT98 887 aa11.21□□□□□ -0.61
LINC02405-203ENST00000546062 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
LINC02405-203ENST00000546062 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
LINC02405-203ENST00000546062 CREBZFQ9NS37 354 aa11.21□□□□□ -0.61
LINC02405-203ENST00000546062 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
LINC02405-203ENST00000546062 GJA3Q9Y6H8 435 aa11.21□□□□□ -0.61
LINC02405-203ENST00000546062 SBF1O95248 1867 aa11.21□□□□□ -0.62
LINC02405-203ENST00000546062 KDM3BQ7LBC6 1761 aa11.21□□□□□ -0.62
LINC02405-203ENST00000546062 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
LINC02405-203ENST00000546062 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
LINC02405-203ENST00000546062 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
LINC02405-203ENST00000546062 KLRG2A4D1S0 409 aaPredicted RBP11.2□□□□□ -0.62
LINC02405-203ENST00000546062 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms