RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 ZBTB3Q9H5J0 574 aa21.67■■□□□ 1.06
CADM1-220ENST00000546000 ANO8Q9HCE9 1232 aaPredicted RBP21.67■■□□□ 1.06
CADM1-220ENST00000546000 RC3H1Q5TC82 1133 aaKnown RBP21.66■■□□□ 1.06
CADM1-220ENST00000546000 SLC4A10Q6U841 1118 aa21.66■■□□□ 1.06
CADM1-220ENST00000546000 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
CADM1-220ENST00000546000 ARHGAP45Q92619 1136 aa21.66■■□□□ 1.06
CADM1-220ENST00000546000 ARXQ96QS3 562 aa21.66■■□□□ 1.06
CADM1-220ENST00000546000 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
CADM1-220ENST00000546000 MAP3K2Q9Y2U5 619 aa21.66■■□□□ 1.06
CADM1-220ENST00000546000 N4BP2Q86UW6 1770 aaPredicted RBP21.66■■□□□ 1.06
CADM1-220ENST00000546000 COG6Q9Y2V7 657 aa21.65■■□□□ 1.06
CADM1-220ENST00000546000 BCORQ6W2J9 1755 aa21.65■■□□□ 1.06
CADM1-220ENST00000546000 SCN7AQ01118 1682 aa21.65■■□□□ 1.06
CADM1-220ENST00000546000 RPS6KA4O75676 772 aa21.64■■□□□ 1.05
CADM1-220ENST00000546000 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.05
CADM1-220ENST00000546000 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.05
CADM1-220ENST00000546000 KSR2Q6VAB6 950 aa21.63■■□□□ 1.05
CADM1-220ENST00000546000 KIF6Q6ZMV9 814 aa21.63■■□□□ 1.05
CADM1-220ENST00000546000 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
CADM1-220ENST00000546000 DNAAF4Q8WXU2 420 aa21.63■■□□□ 1.05
CADM1-220ENST00000546000 AKT1S1Q96B36 256 aa21.63■■□□□ 1.05
CADM1-220ENST00000546000 MAP3K15Q6ZN16 1313 aa21.62■■□□□ 1.05
CADM1-220ENST00000546000 DDX58O95786 925 aaKnown RBP21.62■■□□□ 1.05
CADM1-220ENST00000546000 PDE3AQ14432 1141 aa21.62■■□□□ 1.05
CADM1-220ENST00000546000 ANKRD13DQ6ZTN6 518 aa21.62■■□□□ 1.05
CADM1-220ENST00000546000 EXOC6Q8TAG9 804 aa21.62■■□□□ 1.05
CADM1-220ENST00000546000 SRP68Q9UHB9 627 aaKnown RBP21.62■■□□□ 1.05
CADM1-220ENST00000546000 RTCBQ9Y3I0 505 aaKnown RBP21.62■■□□□ 1.05
CADM1-220ENST00000546000 FKBP8Q14318 412 aa21.61■■□□□ 1.05
CADM1-220ENST00000546000 HLFQ16534 295 aa21.61■■□□□ 1.05
CADM1-220ENST00000546000 ITPRIPQ8IWB1 547 aa21.61■■□□□ 1.05
CADM1-220ENST00000546000 PLBD2Q8NHP8 589 aa21.61■■□□□ 1.05
CADM1-220ENST00000546000 MYD88Q99836 296 aa21.61■■□□□ 1.05
CADM1-220ENST00000546000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.6■■□□□ 1.05
CADM1-220ENST00000546000 CAMTA2O94983 1202 aa21.6■■□□□ 1.05
CADM1-220ENST00000546000 NEFLP07196 543 aa21.6■■□□□ 1.05
CADM1-220ENST00000546000 ARHGEF1Q92888 912 aaKnown RBP21.59■■□□□ 1.05
CADM1-220ENST00000546000 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
CADM1-220ENST00000546000 ANKRD36CQ5JPF3 1778 aa21.59■■□□□ 1.05
CADM1-220ENST00000546000 AFDNP55196 1824 aaKnown RBP21.58■■□□□ 1.05
CADM1-220ENST00000546000 ATP5J2-PTCD1G3V325 749 aa21.58■■□□□ 1.05
CADM1-220ENST00000546000 IGKV5-2P06315 115 aa21.58■■□□□ 1.05
CADM1-220ENST00000546000 MVPQ14764 893 aaKnown RBP21.58■■□□□ 1.05
CADM1-220ENST00000546000 CWF19L2Q2TBE0 894 aaKnown RBP21.58■■□□□ 1.05
CADM1-220ENST00000546000 BEND3Q5T5X7 828 aa21.58■■□□□ 1.05
CADM1-220ENST00000546000 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
CADM1-220ENST00000546000 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
CADM1-220ENST00000546000 METTL22Q9BUU2 404 aaPredicted RBP21.57■■□□□ 1.04
CADM1-220ENST00000546000 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
CADM1-220ENST00000546000 NUP98P52948 1817 aa21.57■■□□□ 1.04
CADM1-220ENST00000546000 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
CADM1-220ENST00000546000 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
CADM1-220ENST00000546000 PNPLA7Q6ZV29 1317 aa21.55■■□□□ 1.04
CADM1-220ENST00000546000 A0A087WZG4 1122 aa21.55■■□□□ 1.04
CADM1-220ENST00000546000 MS4A1P11836 297 aa21.55■■□□□ 1.04
CADM1-220ENST00000546000 GPTP24298 496 aa21.55■■□□□ 1.04
CADM1-220ENST00000546000 SSFA2P28290 1259 aa21.55■■□□□ 1.04
CADM1-220ENST00000546000 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
CADM1-220ENST00000546000 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
CADM1-220ENST00000546000 TRAPPC3LQ5T215 181 aa21.54■■□□□ 1.04
CADM1-220ENST00000546000 MEIS3Q99687 375 aa21.54■■□□□ 1.04
CADM1-220ENST00000546000 SRCIN1Q9C0H9 1055 aa21.54■■□□□ 1.04
CADM1-220ENST00000546000 STK32BQ9NY57 414 aa21.54■■□□□ 1.04
CADM1-220ENST00000546000 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
CADM1-220ENST00000546000 NEURL1BA8MQ27 555 aa21.53■■□□□ 1.04
CADM1-220ENST00000546000 SLC15A2Q16348 729 aa21.53■■□□□ 1.04
CADM1-220ENST00000546000 GIGYF2Q6Y7W6 1299 aaKnown RBP21.53■■□□□ 1.04
CADM1-220ENST00000546000 COL23A1Q86Y22 540 aaPredicted RBP21.53■■□□□ 1.04
CADM1-220ENST00000546000 UBN2Q6ZU65 1347 aa21.53■■□□□ 1.04
CADM1-220ENST00000546000 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 ERVV-1B6SEH8 477 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 ADRA2BP18089 450 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 RFC4P35249 363 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 TCIRG1Q13488 830 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 LINS1Q8NG48 757 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 JARID2Q92833 1246 aaPredicted RBP21.52■■□□□ 1.04
CADM1-220ENST00000546000 ISCA1Q9BUE6 129 aa21.52■■□□□ 1.04
CADM1-220ENST00000546000 MSH5O43196 834 aa21.51■■□□□ 1.03
CADM1-220ENST00000546000 NEXNQ0ZGT2 675 aa21.51■■□□□ 1.03
CADM1-220ENST00000546000 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
CADM1-220ENST00000546000 ZPR1O75312 459 aa21.5■■□□□ 1.03
CADM1-220ENST00000546000 PDGFDQ9GZP0 370 aaPredicted RBP21.5■■□□□ 1.03
CADM1-220ENST00000546000 DDX19BQ9UMR2 479 aa21.5■■□□□ 1.03
CADM1-220ENST00000546000 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
CADM1-220ENST00000546000 TBC1D9BQ66K14 1250 aa21.49■■□□□ 1.03
CADM1-220ENST00000546000 BICDL1Q6ZP65 573 aa21.49■■□□□ 1.03
CADM1-220ENST00000546000 FAM177BA6PVY3 158 aa21.48■■□□□ 1.03
CADM1-220ENST00000546000 ZBTB7BO15156 539 aaPredicted RBP21.48■■□□□ 1.03
CADM1-220ENST00000546000 ALDH1L1O75891 902 aa21.48■■□□□ 1.03
CADM1-220ENST00000546000 GYS1P13807 737 aa21.48■■□□□ 1.03
CADM1-220ENST00000546000 GCKRQ14397 625 aa21.48■■□□□ 1.03
CADM1-220ENST00000546000 ZNF34Q8IZ26 560 aa21.48■■□□□ 1.03
CADM1-220ENST00000546000 COL24A1Q17RW2 1714 aa21.48■■□□□ 1.03
CADM1-220ENST00000546000 RTL5Q5HYW3 569 aaPredicted RBP21.47■■□□□ 1.03
CADM1-220ENST00000546000 MSL1Q68DK7 614 aa21.47■■□□□ 1.03
CADM1-220ENST00000546000 NLRP10Q86W26 655 aa21.47■■□□□ 1.03
CADM1-220ENST00000546000 USP44Q9H0E7 712 aa21.47■■□□□ 1.03
CADM1-220ENST00000546000 CWC25Q9NXE8 425 aaPredicted RBP21.47■■□□□ 1.03
CADM1-220ENST00000546000 NIP7Q9Y221 180 aaKnown RBP eCLIP21.47■■□□□ 1.03
CADM1-220ENST00000546000 ZNF652Q9Y2D9 606 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms