RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 ACEP12821 1306 aa9.05□□□□□ -0.96
LDHC-209ENST00000545848 MOXD2PA6NHM9 499 aa9.04□□□□□ -0.96
LDHC-209ENST00000545848 NDUFV2P19404 249 aa9.04□□□□□ -0.96
LDHC-209ENST00000545848 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
LDHC-209ENST00000545848 TESK2Q96S53 571 aa9.04□□□□□ -0.96
LDHC-209ENST00000545848 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
LDHC-209ENST00000545848 PEAK1Q9H792 1746 aa9.03□□□□□ -0.96
LDHC-209ENST00000545848 CYP4X1Q8N118 509 aa9.03□□□□□ -0.96
LDHC-209ENST00000545848 CPSF1Q10570 1443 aaKnown RBP9.03□□□□□ -0.96
LDHC-209ENST00000545848 SHANK3Q9BYB0 1731 aa9.02□□□□□ -0.96
LDHC-209ENST00000545848 LRRC37A3O60309 1634 aa9.02□□□□□ -0.96
LDHC-209ENST00000545848 WNT7AO00755 349 aa9.02□□□□□ -0.97
LDHC-209ENST00000545848 MEX3CQ5U5Q3 659 aaKnown RBP9.02□□□□□ -0.97
LDHC-209ENST00000545848 SBNO2Q9Y2G9 1366 aa9.01□□□□□ -0.97
LDHC-209ENST00000545848 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
LDHC-209ENST00000545848 MS4A1P11836 297 aa9.01□□□□□ -0.97
LDHC-209ENST00000545848 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
LDHC-209ENST00000545848 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
LDHC-209ENST00000545848 CDK12Q9NYV4 1490 aaPredicted RBP9.01□□□□□ -0.97
LDHC-209ENST00000545848 USP19O94966 1318 aa9.01□□□□□ -0.97
LDHC-209ENST00000545848 SBF2Q86WG5 1849 aa9.01□□□□□ -0.97
LDHC-209ENST00000545848 PLEKHG3A1L390 1219 aa9□□□□□ -0.97
LDHC-209ENST00000545848 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
LDHC-209ENST00000545848 ST8SIA5O15466 376 aa9□□□□□ -0.97
LDHC-209ENST00000545848 CHRNA2Q15822 529 aa9□□□□□ -0.97
LDHC-209ENST00000545848 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
LDHC-209ENST00000545848 CABP1Q9NZU7 370 aa9□□□□□ -0.97
LDHC-209ENST00000545848 FAM208AQ9UK61 1670 aaKnown RBP9□□□□□ -0.97
LDHC-209ENST00000545848 A0A1W2PP64 1363 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 USP47Q96K76 1375 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 SRPK2P78362 688 aaKnown RBP8.99□□□□□ -0.97
LDHC-209ENST00000545848 MRGPRX2Q96LB1 330 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 CARD11Q9BXL7 1154 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 AAASQ9NRG9 546 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 PARP4Q9UKK3 1724 aaKnown RBP8.99□□□□□ -0.97
LDHC-209ENST00000545848 ANKRD26Q9UPS8 1709 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 ARHGEF10O15013 1369 aa8.99□□□□□ -0.97
LDHC-209ENST00000545848 ST20-MTHFSA0A0A6YYL1 179 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 AVPP01185 164 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 SKOR1P84550 965 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 PSME1Q06323 249 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 MTMR2Q13614 643 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 NGLY1Q96IV0 654 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
LDHC-209ENST00000545848 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 USP21Q9UK80 565 aa8.98□□□□□ -0.97
LDHC-209ENST00000545848 EIF3AQ14152 1382 aaKnown RBP8.98□□□□□ -0.97
LDHC-209ENST00000545848 COL5A2P05997 1499 aaPredicted RBP8.97□□□□□ -0.97
LDHC-209ENST00000545848 GJA5P36382 358 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 WNT7BP56706 349 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 PDE4DQ08499 809 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
LDHC-209ENST00000545848 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
LDHC-209ENST00000545848 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
LDHC-209ENST00000545848 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
LDHC-209ENST00000545848 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 OVOS2A0A0J9YW53 1432 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 OVOS2Q6IE36 1432 aa8.97□□□□□ -0.97
LDHC-209ENST00000545848 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
LDHC-209ENST00000545848 CCNYL3P0C7X3 344 aa8.96□□□□□ -0.98
LDHC-209ENST00000545848 FBLN1P23142 703 aa8.96□□□□□ -0.98
LDHC-209ENST00000545848 PTPRNQ16849 979 aa8.96□□□□□ -0.98
LDHC-209ENST00000545848 RC3H1Q5TC82 1133 aaKnown RBP8.96□□□□□ -0.98
LDHC-209ENST00000545848 SLC12A5Q9H2X9 1139 aa8.96□□□□□ -0.98
LDHC-209ENST00000545848 POTECB2RU33 542 aa8.95□□□□□ -0.98
LDHC-209ENST00000545848 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
LDHC-209ENST00000545848 ZC3H6P61129 1189 aaKnown RBP8.95□□□□□ -0.98
LDHC-209ENST00000545848 FAM182BQ5T319 152 aa8.95□□□□□ -0.98
LDHC-209ENST00000545848 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
LDHC-209ENST00000545848 NME9Q86XW9 330 aa8.95□□□□□ -0.98
LDHC-209ENST00000545848 RREB1Q92766 1687 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 MAP2P11137 1827 aaKnown RBP8.94□□□□□ -0.98
LDHC-209ENST00000545848 J3QL48 77 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 SMPD1P17405 629 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 RXRBP28702 533 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 CTC1Q2NKJ3 1217 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 TTC21BQ7Z4L5 1316 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 EVC2Q86UK5 1308 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 RGPD1P0DJD0 1748 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 NUP188Q5SRE5 1749 aa8.94□□□□□ -0.98
LDHC-209ENST00000545848 AXIN1O15169 862 aa8.93□□□□□ -0.98
LDHC-209ENST00000545848 SPTLC1O15269 473 aa8.93□□□□□ -0.98
LDHC-209ENST00000545848 RBM6P78332 1123 aaKnown RBP8.93□□□□□ -0.98
LDHC-209ENST00000545848 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
LDHC-209ENST00000545848 UNC5CLQ8IV45 518 aa8.93□□□□□ -0.98
LDHC-209ENST00000545848 EVA1BQ9NVM1 165 aa8.93□□□□□ -0.98
LDHC-209ENST00000545848 BTG4Q9NY30 223 aa8.93□□□□□ -0.98
LDHC-209ENST00000545848 CPDO75976 1380 aa8.92□□□□□ -0.98
LDHC-209ENST00000545848 ATAD2Q6PL18 1390 aa8.92□□□□□ -0.98
LDHC-209ENST00000545848 KTN1Q86UP2 1357 aaKnown RBP8.92□□□□□ -0.98
LDHC-209ENST00000545848 RIC3Q7Z5B4 369 aa8.92□□□□□ -0.98
LDHC-209ENST00000545848 ZNF775Q96BV0 537 aaPredicted RBP8.92□□□□□ -0.98
LDHC-209ENST00000545848 GJD4Q96KN9 370 aaPredicted RBP8.92□□□□□ -0.98
LDHC-209ENST00000545848 DACH1Q9UI36 760 aa8.92□□□□□ -0.98
LDHC-209ENST00000545848 TOGARAM1Q9Y4F4 1720 aa8.91□□□□□ -0.98
LDHC-209ENST00000545848 SMCPP49901 116 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms