RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 NFIXQ14938 502 aa15.38■□□□□ 0.05
LTBR-214ENST00000545445 SOS1Q07889 1333 aaPredicted RBP15.38■□□□□ 0.05
LTBR-214ENST00000545445 CARMIL3Q8ND23 1372 aa15.37■□□□□ 0.05
LTBR-214ENST00000545445 ZNF853P0CG23 659 aa15.37■□□□□ 0.05
LTBR-214ENST00000545445 ZNF790Q6PG37 636 aa15.37■□□□□ 0.05
LTBR-214ENST00000545445 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
LTBR-214ENST00000545445 TTC5Q8N0Z6 440 aa15.37■□□□□ 0.05
LTBR-214ENST00000545445 TSPYL4Q9UJ04 414 aa15.37■□□□□ 0.05
LTBR-214ENST00000545445 E9PSI1 815 aa15.36■□□□□ 0.05
LTBR-214ENST00000545445 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
LTBR-214ENST00000545445 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
LTBR-214ENST00000545445 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
LTBR-214ENST00000545445 VIRMAQ69YN4 1812 aaKnown RBP15.36■□□□□ 0.05
LTBR-214ENST00000545445 SIPA1L3O60292 1781 aaPredicted RBP15.35■□□□□ 0.05
LTBR-214ENST00000545445 FOXN1O15353 648 aa15.35■□□□□ 0.05
LTBR-214ENST00000545445 LAS1LQ9Y4W2 734 aaKnown RBP15.35■□□□□ 0.05
LTBR-214ENST00000545445 DLEC1Q9Y238 1755 aa15.34■□□□□ 0.05
LTBR-214ENST00000545445 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
LTBR-214ENST00000545445 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
LTBR-214ENST00000545445 COL15A1P39059 1388 aa15.34■□□□□ 0.05
LTBR-214ENST00000545445 NRXN2Q9P2S2 1712 aa15.34■□□□□ 0.05
LTBR-214ENST00000545445 SERPINB2P05120 415 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 POTEIP0CG38 1075 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 SLC39A6Q13433 755 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
LTBR-214ENST00000545445 NARFQ9UHQ1 456 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 ZBTB1Q9Y2K1 713 aa15.33■□□□□ 0.04
LTBR-214ENST00000545445 AFDNP55196 1824 aaKnown RBP15.33■□□□□ 0.04
LTBR-214ENST00000545445 CYP19A1P11511 503 aaPredicted RBP15.32■□□□□ 0.04
LTBR-214ENST00000545445 SLFN5Q08AF3 891 aa15.32■□□□□ 0.04
LTBR-214ENST00000545445 DPY19L2Q6NUT2 758 aa15.32■□□□□ 0.04
LTBR-214ENST00000545445 MIS18AQ9NYP9 233 aa15.32■□□□□ 0.04
LTBR-214ENST00000545445 H0YIN7 160 aa15.31■□□□□ 0.04
LTBR-214ENST00000545445 SLC34A2O95436 690 aa15.31■□□□□ 0.04
LTBR-214ENST00000545445 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
LTBR-214ENST00000545445 ERFEQ4G0M1 354 aa15.31■□□□□ 0.04
LTBR-214ENST00000545445 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
LTBR-214ENST00000545445 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
LTBR-214ENST00000545445 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
LTBR-214ENST00000545445 BICDL1Q6ZP65 573 aa15.3■□□□□ 0.04
LTBR-214ENST00000545445 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
LTBR-214ENST00000545445 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
LTBR-214ENST00000545445 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
LTBR-214ENST00000545445 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 KCNQ3O43525 872 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 C21orf2O43822 256 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 HOXB7P09629 217 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
LTBR-214ENST00000545445 ZNF622Q969S3 477 aaKnown RBP eCLIP15.29■□□□□ 0.04
LTBR-214ENST00000545445 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
LTBR-214ENST00000545445 PRDM10Q9NQV6 1147 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 KDM3BQ7LBC6 1761 aa15.29■□□□□ 0.04
LTBR-214ENST00000545445 DDNO94850 711 aaPredicted RBP15.28■□□□□ 0.04
LTBR-214ENST00000545445 CCDC24Q8N4L8 307 aa15.28■□□□□ 0.04
LTBR-214ENST00000545445 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
LTBR-214ENST00000545445 AIDAQ96BJ3 306 aa15.28■□□□□ 0.04
LTBR-214ENST00000545445 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
LTBR-214ENST00000545445 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
LTBR-214ENST00000545445 COL11A2P13942 1736 aaPredicted RBP15.27■□□□□ 0.04
LTBR-214ENST00000545445 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
LTBR-214ENST00000545445 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.04
LTBR-214ENST00000545445 CCDC88AQ3V6T2 1871 aa15.27■□□□□ 0.03
LTBR-214ENST00000545445 STARD3NLO95772 234 aa15.26■□□□□ 0.03
LTBR-214ENST00000545445 VEGFBP49765 207 aa15.26■□□□□ 0.03
LTBR-214ENST00000545445 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
LTBR-214ENST00000545445 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
LTBR-214ENST00000545445 PASKQ96RG2 1323 aa15.25■□□□□ 0.03
LTBR-214ENST00000545445 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
LTBR-214ENST00000545445 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
LTBR-214ENST00000545445 LTBP3Q9NS15 1303 aa15.24■□□□□ 0.03
LTBR-214ENST00000545445 LBX1P52954 281 aa15.24■□□□□ 0.03
LTBR-214ENST00000545445 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
LTBR-214ENST00000545445 FAM161AQ3B820 660 aa15.24■□□□□ 0.03
LTBR-214ENST00000545445 PRR5LQ6MZQ0 368 aa15.24■□□□□ 0.03
LTBR-214ENST00000545445 ZNF428Q96B54 188 aa15.24■□□□□ 0.03
LTBR-214ENST00000545445 ANKRD31Q8N7Z5 1873 aa15.24■□□□□ 0.03
LTBR-214ENST00000545445 PDE6BP35913 854 aa15.23■□□□□ 0.03
LTBR-214ENST00000545445 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
LTBR-214ENST00000545445 LDHDQ86WU2 507 aa15.23■□□□□ 0.03
LTBR-214ENST00000545445 C8orf58Q8NAV2 365 aa15.23■□□□□ 0.03
LTBR-214ENST00000545445 BRIP1Q9BX63 1249 aa15.23■□□□□ 0.03
LTBR-214ENST00000545445 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
LTBR-214ENST00000545445 ERBB4Q15303 1308 aa15.22■□□□□ 0.03
LTBR-214ENST00000545445 TMEM88BA6NKF7 163 aa15.22■□□□□ 0.03
LTBR-214ENST00000545445 ABHD8Q96I13 439 aa15.22■□□□□ 0.03
LTBR-214ENST00000545445 TAF1DQ9H5J8 278 aaPredicted RBP15.22■□□□□ 0.03
LTBR-214ENST00000545445 WBP1LQ9NX94 342 aa15.22■□□□□ 0.03
LTBR-214ENST00000545445 USP16Q9Y5T5 823 aa15.22■□□□□ 0.03
LTBR-214ENST00000545445 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
LTBR-214ENST00000545445 IQCA1LA6NCM1 817 aa15.21■□□□□ 0.03
LTBR-214ENST00000545445 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
LTBR-214ENST00000545445 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
LTBR-214ENST00000545445 EAPPQ56P03 285 aaPredicted RBP15.21■□□□□ 0.03
LTBR-214ENST00000545445 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms